Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_F11
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...   182   2e-48
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      37   1e-04
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.69 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   1.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   4.8  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score =  182 bits (443), Expect = 2e-48
 Identities = 81/135 (60%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = +3

Query: 99  MITKIFFLVQLFYIVVSKSS-AEENCETVGSEVHVTKEEYDEMGRLLRSCSGEVSVNKCE 275
           M  KI   +     V S S  +EE CET+ S++++ KEE+DE+GRL R C+GEV+VNKCE
Sbjct: 1   MFDKIILCLVYATCVYSVSEISEETCETLMSDINLIKEEFDELGRLQRICNGEVAVNKCE 60

Query: 276 GMCNSQVHPSISSATGFQKECFCCREKFLRERLVTLTHCYDPDGIRFEDEENALMEVRLR 455
           G C SQV PS+ + TGF KEC+CCRE FLRER +TLTHCYDPDG+R   E    M+V+LR
Sbjct: 61  GSCKSQVQPSVITPTGFLKECYCCRESFLRERTITLTHCYDPDGVRLTAETVNSMDVKLR 120

Query: 456 EPDECECYKCGDFSR 500
           EP EC+CYKCGDFSR
Sbjct: 121 EPAECKCYKCGDFSR 135


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +3

Query: 270 CEGMCNSQVHPSISSATGFQKECFCCREKFLRERLVTLTHCYDPDGIRFEDEENALMEVR 449
           C G C S +  S S     ++ C CC+E   RE  V+L   + P   + +  E   ++V 
Sbjct: 65  CIGRCASYIQVSGSKIWQMERSCMCCQESGEREASVSL---FCP---KAKPGERKFIKVT 118

Query: 450 LREPDECECYKC 485
            + P EC C  C
Sbjct: 119 TKAPLECMCRPC 130


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 235 SNLPISSYSSLVTCTSLPTVSQFSS 161
           SN   SS S + +C+S+PT + + S
Sbjct: 92  SNPTYSSRSVMTSCSSVPTTASYGS 116


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 381 LTHCYDPDGIRFE 419
           LT  YDPDGI FE
Sbjct: 99  LTAKYDPDGIYFE 111


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 477 NIHTHRALAGELPLMRFLHLQNECH 403
           N+ TH  +    P MR LH    CH
Sbjct: 177 NLKTHMGVHRAKPPMRVLHQCPVCH 201


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 129 LFYIVVSKSSAEENCETVGSEVHVTKEEYDEMGRLLRS 242
           LF+++   SS  EN +      +V  +E  +  RLL++
Sbjct: 8   LFFVIAIASSLAENSKYTTKYDNVDLDEIIKSDRLLKN 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,954
Number of Sequences: 336
Number of extensions: 2519
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)