Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_F09
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0290 + 3843610-3843712,3844088-3846003 36 0.044
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 33 0.31
04_01_0301 + 4016588-4016627,4016715-4018837 33 0.31
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 32 0.41
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 31 0.94
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 0.94
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 31 1.2
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 31 1.2
01_05_0167 + 18849791-18849973,18850081-18850250,18850341-188504... 30 1.6
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 30 2.2
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14... 30 2.2
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 29 2.9
09_04_0539 - 18416184-18416830,18417983-18419057 29 2.9
04_03_0249 + 13462985-13463170,13463190-13463297 29 3.8
11_01_0498 - 3828516-3829058 29 5.0
06_03_0721 - 23861426-23861929,23862013-23862219,23862598-238628... 29 5.0
11_06_0196 + 21144094-21144483 28 6.6
07_03_1624 + 28204892-28205024,28205160-28205242,28205305-282053... 28 8.7
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 35.5 bits (78), Expect = 0.044
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +3
Query: 300 EKHKQLAQEYLKIQTELAYLSNHKTELEEKMDDDELRQKREMIQLENEKESLIKLYCSLN 479
EK+ Q A E K+Q EL L+ K + DD++ + E + L++ E + N
Sbjct: 114 EKYSQSAAEVEKLQKELVALAEVKEVAAKAFDDEKAKMMMESVDLKSRLEEI-----QGN 168
Query: 480 KQLARAENDSWLHSEEMPHE 539
+ ++END L SE + E
Sbjct: 169 MDMIKSENDK-LRSEALVAE 187
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 291 RIFEKHKQLA----QEYLKIQTELAYLSNHKTELEEKMDDDELRQKREMIQLENEKESLI 458
R EK +Q A QEYL I+ E A +LEE++ + R K+E+ +E L
Sbjct: 772 RSLEKERQRASESRQEYLAIKEEAAMQEGRAKQLEEEIKELRTRHKKELQDAAEHRELLE 831
Query: 459 K 461
K
Sbjct: 832 K 832
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +3
Query: 294 IFEKHKQLAQEYLKIQTELAYLSNHKTELEEKMDDDELRQKREMIQLENEKESLIKLYCS 473
I EK+ Q E K+Q EL+ L K + DD++ + E L+ E +
Sbjct: 221 IKEKYGQSEAEVKKLQMELSALVMEKEVAVKTFDDEKDKMMMESADLKRRLEEI-----Q 275
Query: 474 LNKQLARAENDSWLHSEEM 530
NK L +END L SE +
Sbjct: 276 ANKDLVESENDR-LRSEAL 293
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 32.3 bits (70), Expect = 0.41
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +3
Query: 213 ALDSMHMMLDPHLRPISPDLSNEESKRIFEKHKQLAQEYLKI---QTELAYLSNHKTELE 383
+ D+M + + L D+ + E K + +K + L + K+ Q +L SN + E
Sbjct: 353 SFDAMLVQKEADLVQREKDVRSSEEK-LSKKEQVLNESKKKLEEWQNDLDTKSNALKKWE 411
Query: 384 EKMDDDELRQKREMIQLENEKE--SLIKLYCSLNKQLARAENDSWLHSE 524
E + +DE + + +Q+ENE++ + KL K AE + L +
Sbjct: 412 ESLQNDEKQLSEQKLQIENERKQAEMYKLELESLKATVVAEKEKILQEQ 460
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 EESKRIFEKHKQL-AQEYLKIQTELAYLSNHKTELEEKMDDDELRQKREMIQLENEKESL 455
E K+I E+ +++ A+E + +Q L +H +LE K D +L QLENEK+S
Sbjct: 305 EREKKIAEREEKVSAREKVGLQK---LLEDHNVKLESKRRDFDL-------QLENEKKSF 354
Query: 456 IKLYCSLNKQLARAEND 506
+ L + E D
Sbjct: 355 DAMLVQKEADLVQREKD 371
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +3
Query: 216 LDSMHMMLDP-HLRPISPDLSNEESKRIFEKHKQLAQE-YLKIQTELAYLSNHKTELEEK 389
LD++ ++ H +P S L + + + + K E Y +Q +Y+S +EEK
Sbjct: 306 LDAVDFVVSSNHGKPFSNQLFTQ-IQEVHHRQKDANSEVYSSMQETDSYISLITKMVEEK 364
Query: 390 MDDDELRQKREMIQLENEKESLIKLYCSLNKQLARAEND 506
++ LR ++++++ E+E+ + + + K + R+E D
Sbjct: 365 LNGTILRMEQQLLK---EQEARLDIQNEMTKAILRSEED 400
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 270 LSNEESKRIFEKHKQLAQEYLKIQTELAYLSNHKTELEEKMDDDELRQKREMIQLENEKE 449
L N+ ++ I EKH+ L +E E L NH ELE ++ RQK + + E++ +
Sbjct: 1273 LENKHTE-IMEKHRHLGEENTSANKENRKLQNHVQELEAQL--QLARQKLRVTEAESKSK 1329
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 411 QKREMIQLENEKESLIKLYCSLNKQL 488
+ E++QL+NE+ L+K+ C L K++
Sbjct: 817 KSEELLQLQNERHDLMKISCELRKEM 842
>10_08_0829 -
20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 240 DPHLRPISPDLSNEE--SKRIFEKHKQLAQEYLKIQTELAYLSNHKTELEEKMDDDELRQ 413
DP + P S ++S+E S R+ K K L + ++ +L + +ELEEK+ +
Sbjct: 572 DPSV-PNSEEVSSEGDLSDRLTSKVKYLETKCADLELKLISFRSESSELEEKLQKSQEEL 630
Query: 414 KREMIQLENEKESL 455
K +++L + ++ L
Sbjct: 631 KDRILELSDLRDKL 644
>01_05_0167 +
18849791-18849973,18850081-18850250,18850341-18850413,
18850729-18850839,18850947-18850992,18851085-18851148,
18851810-18851912,18851999-18852094,18852186-18852215,
18852434-18852533,18852761-18852845,18852965-18853088
Length = 394
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/80 (23%), Positives = 42/80 (52%)
Frame = +3
Query: 267 DLSNEESKRIFEKHKQLAQEYLKIQTELAYLSNHKTELEEKMDDDELRQKREMIQLENEK 446
+++ E+ + E+ +L +EY +QT N L++ DDD + + ++N+K
Sbjct: 90 EMNEEDDEDEGEEMNELEKEYRTLQTNQ---QNILETLKQHRDDDVSKGQA----VKNQK 142
Query: 447 ESLIKLYCSLNKQLARAEND 506
E + ++C N+++ +A D
Sbjct: 143 EPIRSMFCDHNQEIEQAYLD 162
>10_01_0307 +
3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 577 VVPKGAAPRASCHSWGISSE*SQLSFSARANCLFRLQYSFIK 452
V+ K A R SC+ + SE SQ S R +F LQ +FIK
Sbjct: 777 VLVKTIAFRHSCNIIDVLSEFSQPSIEMRTCIIFHLQLAFIK 818
>01_01_0020 +
147147-147313,148450-148548,148634-148742,148856-148927,
149056-149061,150811-150915,151048-151539,151629-152025,
152178-153646,154010-154450,154543-155214
Length = 1342
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 410 AEERNDTIRKRKGILNKTVLQSKQAVSASGK--RQLASFRRDAPR 538
A +R ++RK K + K +LQS + SAS + + LA +D PR
Sbjct: 265 AADRLTSLRKAKAQIQKEILQSHPSPSASNRKDKMLAMLVQDEPR 309
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 309 KQLAQEYLKIQTELAYLSNHKTELEEKMDDDELRQKREMIQLENEKESLIK-LYCSLNKQ 485
+ L ++ TE+ L ELE++++ +++RQ+ + +LE + E+ ++ + SL Q
Sbjct: 658 ESLEEQLYSANTEVERLHVIVKELEDEVEKEKMRQEELVAELEMKMETAVEAIKESLEAQ 717
Query: 486 LARAEND 506
L A +
Sbjct: 718 LCAANTE 724
>09_04_0539 - 18416184-18416830,18417983-18419057
Length = 573
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 279 EESKRIFEKHKQLAQEYLKIQTELAYLSNHKTELEEKMDD-----DELRQKREMIQLENE 443
E+ IF+ K L +++ +++ +L + N LEE ++ +L + E+++L+
Sbjct: 478 EDQAAIFDIQKSLPEDHKQLEAKLRHTENRALMLEEMVEKLEAQCKDLARTSEILKLQ-A 536
Query: 444 KESLIKLYCSL 476
+ S L+CS+
Sbjct: 537 RASRASLFCSV 547
>04_03_0249 + 13462985-13463170,13463190-13463297
Length = 97
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 116 WWLRCRWWRHTRRCGGSALGARAEGAWR 33
W ++ + W+ R GG A+GA EGA R
Sbjct: 6 WSMKQQLWQKARADGGDAVGAGTEGASR 33
>11_01_0498 - 3828516-3829058
Length = 180
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Frame = -2
Query: 116 WWLRCRWWRHTRRCGG---SALGARAEG 42
WW R RWW C G S G R G
Sbjct: 77 WWWRRRWWWRDDGCAGARRSGAGGRGSG 104
>06_03_0721 -
23861426-23861929,23862013-23862219,23862598-23862852,
23862858-23863212,23863533-23863834,23864006-23864281,
23864854-23865167,23865411-23865683,23865831-23866415,
23866806-23867132,23867270-23867337,23868670-23868746
Length = 1180
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +3
Query: 246 HLRPISPDLSNEESKRIFEKHKQLAQEYLKIQTELAYLSNHKTELEEKMDDDELRQKREM 425
HL D S + R++ KHK + + + + EL ++++D+ K
Sbjct: 735 HLMAEGSD-SQGSACRLYFKHKTAETKEHETSADHVLNMTIRYELHSRLENDQAIDKTAQ 793
Query: 426 IQLENEKESLIKL 464
QLE EK+ L K+
Sbjct: 794 RQLEKEKDHLRKV 806
>11_06_0196 + 21144094-21144483
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 686 GNTELNENNNSWQDCSLCYVQ**RNNVRCGRAVTSRRGPKGRGPAS 549
G + E SW+ ++ R+ R G + RR +GRG AS
Sbjct: 19 GGARMGEQGCSWRSTTMAKQAEERDGCRAGEGASWRRVGRGRGSAS 64
>07_03_1624 +
28204892-28205024,28205160-28205242,28205305-28205376,
28205889-28205946,28206554-28206603,28207805-28207873,
28208183-28208317,28208410-28208581,28208663-28208754,
28208837-28209244,28209783-28210704,28211592-28211831,
28211898-28212229,28212460-28212608,28213265-28213841,
28214078-28214224,28214693-28214968,28215296-28215403,
28215634-28215839,28216079-28216217,28216329-28216982,
28218040-28218099,28218234-28218388,28218414-28218636,
28218729-28218773
Length = 1834
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 PISPDLSNEESKRIFEKHKQLAQ-EYLKIQTELAYLSNHKTELEEKMDDDELRQKREMIQ 431
P+S + S ++FE+H++L E L + L++L++ + EE DDEL + +
Sbjct: 405 PVSSSAAQRTSSQLFEEHEKLVDAEALGL---LSWLASSQA-AEEPTTDDELVNEAILSP 460
Query: 432 LENEKESLIKL 464
L ++K + L
Sbjct: 461 LFSKKSIAVAL 471
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,484,911
Number of Sequences: 37544
Number of extensions: 297322
Number of successful extensions: 1066
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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