Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_F08
(709 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 24 1.1
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 23 2.4
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 23 2.4
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 22 4.3
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 22 4.3
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 22 4.3
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 22 5.6
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 22 5.6
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 7.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 7.4
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 9.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 9.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 9.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 9.8
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 535 VDGSDQSPLPLLAG*IELGNNSMISLINPGVACQGL 428
+D +P LA + LG+NS ++L G++ QGL
Sbjct: 409 IDAGTFKGIPRLAS-LNLGHNSQLTLEINGLSFQGL 443
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 23.0 bits (47), Expect = 2.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 305 VSPPEFDTDFWGVWALPESGGRCDRLRPVGGGCGPGSFHANETLTCDSWVYERD 466
V+P E DF L + RC +P C PG+ ++ CD W D
Sbjct: 473 VAPKECKQDFMP-HELCDKYYRCVHGKPTEFACRPGTVFHTQSNICD-WPEHAD 524
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 411 PGPQPPPTGRSRSHRPP 361
PGP PPTG ++ PP
Sbjct: 160 PGPALPPTGFLCNNYPP 176
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 41 TTNKIIKRNCDVKRVLDLCDVAVT 112
+ NK+I R+ D K L+LC + T
Sbjct: 301 SVNKLIFRSNDPKVTLELCGMIST 324
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 22.2 bits (45), Expect = 4.3
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = -1
Query: 532 DGSDQSPLPLLAG*IEL-----GNNSMISLINPGVACQGLVCMKAAWATATANRSEPVAS 368
DG+ P P ++G E+ G+ ++ I VA W T+ +S+P
Sbjct: 81 DGTQLMPSPTVSG-SEMSSPGAGSGNLSPQIQTQVARPPPARSPYEWIKKTSYQSQPNPE 139
Query: 367 PPGLGESPDS 338
P ++PD+
Sbjct: 140 PADFADAPDA 149
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 22.2 bits (45), Expect = 4.3
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = -1
Query: 532 DGSDQSPLPLLAG*IEL-----GNNSMISLINPGVACQGLVCMKAAWATATANRSEPVAS 368
DG+ P P ++G E+ G+ ++ I VA W T+ +S+P
Sbjct: 81 DGTQLMPSPTVSG-SEMSSPGAGSGNLSPQIQTQVARPPPARSPYEWIKKTSYQSQPNPE 139
Query: 367 PPGLGESPDS 338
P ++PD+
Sbjct: 140 PADFADAPDA 149
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 300 VKCHRQNSTPIFGESGLSPSPGGDATGSDLLAVAV 404
VK QN+T +F +S S PG +T L++ +
Sbjct: 108 VKIMLQNATDLFIKSLESLKPGNQSTPGIKLSINI 142
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 266 GAVQYRCKVPECEVSPPEFDTDFWGVWALP 355
GA ++ CK C+ +P DT+ G+ +LP
Sbjct: 23 GAWRWECKSNYCQKAPITPDTEATGL-SLP 51
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.4 bits (43), Expect = 7.4
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 552 MKTPALWMVPT-KVLFHSSQARSNSATIV*SLS*TQESHVKVSFA*KLPGPQPPP 391
M + L PT K FH++ N A + +ES +S P P PPP
Sbjct: 683 MLSDELLAQPTIKENFHTALEIMNRAVNIGQQPGAKESISYLSMENNAPPPPPPP 737
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 362 GGRCDRLRPVGGG 400
G C R+ PVG G
Sbjct: 759 GAACGRIHPVGSG 771
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 362 GGRCDRLRPVGGG 400
G C R+ PVG G
Sbjct: 759 GAACGRIHPVGSG 771
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 362 GGRCDRLRPVGGG 400
G C R+ PVG G
Sbjct: 759 GAACGRIHPVGSG 771
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 362 GGRCDRLRPVGGG 400
G C R+ PVG G
Sbjct: 759 GAACGRIHPVGSG 771
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 83 VLDLCDVAVTMSRSTRSNELDMDAVWGELGQFGRYQ 190
++DL +VAVT+ + + W L FG+ +
Sbjct: 87 LIDLGEVAVTVLAGILTTPFKLPYFWKMLTGFGKIE 122
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2
Query: 362 GGRCDRLRPVGGG 400
G C R+ P+G G
Sbjct: 185 GAACGRIHPIGSG 197
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2
Query: 362 GGRCDRLRPVGGG 400
G C R+ P+G G
Sbjct: 499 GAACGRIHPIGSG 511
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2
Query: 362 GGRCDRLRPVGGG 400
G C R+ P+G G
Sbjct: 732 GAACGRIHPIGSG 744
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2
Query: 362 GGRCDRLRPVGGG 400
G C R+ P+G G
Sbjct: 732 GAACGRIHPIGSG 744
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,276
Number of Sequences: 336
Number of extensions: 3932
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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