Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_F08
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            27   0.44 
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           27   0.76 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.3  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   1.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   5.4  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   5.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.1  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   9.4  

>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 299 CEVSPPEFDTDFWGVWALPESGGRCDRLR 385
           CE       TDFW + A  E+G  CD L+
Sbjct: 180 CEKRSDMASTDFWLITAYCENGSLCDFLK 208


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = -2

Query: 429 SFA*KLP-GPQPPPTGRSRSH--RPPDSGRAQTPQKSVSNSGGDTSHSGTLHLYCTAP 265
           S A  LP G  P  T  ++ H  +PP       P ++ S     + HSG+  LY   P
Sbjct: 6   SIAFMLPTGANPHQTLTTQVHPSQPPVPMLVPIPSRTASTGSASSGHSGSSSLYDRVP 63


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 411  PGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGTL 286
            PG QP P  RS + +    G  +    + +N GG  S +  L
Sbjct: 1154 PGQQPSPGSRSYNGQMGGGGANRKRSSATNNGGGRQSSNNGL 1195



 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 353 PESGGRCDRLRPVGGG 400
           P+ G  C R+ PVG G
Sbjct: 415 PDLGAACGRIHPVGTG 430


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 359 SGGRCDRLRPVGGGCGPGSFHANETLTCDSWVYE 460
           +G + DR+  VGGG   G      T  C +W YE
Sbjct: 644 TGEQLDRIELVGGGRLNGPADRYYTDPCATWRYE 677


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +2

Query: 371 CDRLRPVGGGCGPGSFHANETLTCDSWVYERDHTIV 478
           CDR  P GGG G G   ++  +  +       H ++
Sbjct: 296 CDRKAPGGGGGGGGKLSSSRHVEAERNARNAQHLLL 331


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +1

Query: 472 YCCRVRSSLRGVEEDFGRNHPQRWCFHGATY 564
           +CCR   SLR     +   H Q W     TY
Sbjct: 186 FCCRYWHSLRLSYACYRAKHRQDWAAQKRTY 216


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 367  PPGLGESPDSPKIGVE 320
            PPG+  +  SPKIG+E
Sbjct: 1753 PPGIEFTLPSPKIGIE 1768


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 524  RPKSSSTPRRLDRTRQQ*YDLSHKPRSRMSRSRLHESC 411
            R  SS  P   D      + + H PR    R +L+ESC
Sbjct: 965  RASSSRCPACKDEDETVDHVMFHCPRFAEERLQLNESC 1002


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,931
Number of Sequences: 2352
Number of extensions: 18492
Number of successful extensions: 81
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)