Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_F07
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 230 8e-61
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 230 8e-61
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 65 5e-11
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 62 5e-10
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 46 2e-05
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 46 2e-05
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 44 1e-04
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 42 3e-04
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 42 4e-04
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 32 0.35
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 32 0.35
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 29 4.3
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 29 4.3
07_03_0943 - 22778877-22780970,22781376-22781480,22781481-227820... 28 5.7
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 28 7.5
11_04_0287 + 15796081-15796206,15796298-15796756 27 9.9
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 230 bits (562), Expect = 8e-61
Identities = 110/160 (68%), Positives = 128/160 (80%)
Frame = +3
Query: 177 LDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRVNELTGIKESDTGXXXXXXXXXXXXK 356
LDE DIALLK+YG G Y+ IK+VE+ I+ + K++N+L GIKESDTG K
Sbjct: 18 LDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDK 77
Query: 357 QTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDR 536
Q +Q EQPLQVARCTKII+ +++D KY+INVKQ AKFVV L D V+PTDIEEGMRVGVDR
Sbjct: 78 QMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDR 137
Query: 537 NKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEXI 656
NKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKE I
Sbjct: 138 NKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQI 177
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 230 bits (562), Expect = 8e-61
Identities = 110/160 (68%), Positives = 128/160 (80%)
Frame = +3
Query: 177 LDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRVNELTGIKESDTGXXXXXXXXXXXXK 356
LDE DIALLK+YG G Y+ IK+VE+ I+ + K++N+L GIKESDTG K
Sbjct: 18 LDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDK 77
Query: 357 QTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDR 536
Q +Q EQPLQVARCTKII+ +++D KY+INVKQ AKFVV L D V+PTDIEEGMRVGVDR
Sbjct: 78 QMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDR 137
Query: 537 NKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEXI 656
NKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKE I
Sbjct: 138 NKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQI 177
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 64.9 bits (151), Expect = 5e-11
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 432 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 611
K ++ V K+VVD+ S+ T I RV + + Y +H+ LP K+DP V +M+VE+
Sbjct: 101 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKV 160
Query: 612 PDVTYSDVGGCKEXI 656
PD TY +GG + I
Sbjct: 161 PDSTYDMIGGLDQQI 175
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 438 IINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 617
I+ V K+VVD+ S+ T + RV + + Y +H+ LP K+DP V +M+VE+ PD
Sbjct: 125 ILLVHPEGKYVVDVDKSIDITKLSPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVPD 184
Query: 618 VTYSDVGGCKEXI 656
TY +GG + I
Sbjct: 185 STYDMIGGLDQQI 197
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 489 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEXI 656
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++ I
Sbjct: 116 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 171
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 489 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEXI 656
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++ I
Sbjct: 119 VDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 174
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 423 NDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 602
++ ++I+ ++VV + V + G RV +D I LP ++DP V M
Sbjct: 72 DNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLH 131
Query: 603 EEKPDVTYSDVGGCKEXI 656
E+ +V+YS VGG + I
Sbjct: 132 EDPGNVSYSAVGGLSDQI 149
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/89 (22%), Positives = 48/89 (53%)
Frame = +3
Query: 378 PLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHI 557
PL + + ++++ ++ I+ + + V + ++ ++ V + R+ +
Sbjct: 36 PLVIGQFMEMVDGNNG----IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVD 91
Query: 558 PLPPKIDPTVTMMQVEEKPDVTYSDVGGC 644
LPP+ D +++++ EKP+VTY+D+GGC
Sbjct: 92 VLPPEADSSISLLGSSEKPNVTYTDIGGC 120
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 432 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 611
++I+ ++VV + V + G RV +D I LP ++DP V M E+
Sbjct: 76 RFIVKASSGPRYVVGCRSKVDKEKLIAGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDP 135
Query: 612 PDVTYSDVGGCKEXI 656
+V+YS VGG + I
Sbjct: 136 GNVSYSAVGGLSDQI 150
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 561 LPPKIDPTVTMMQVEEKPDVTYSDVGG 641
L ++DP V++M+VE+ P +Y+D+GG
Sbjct: 185 LQDEVDPMVSVMKVEKAPLESYADIGG 211
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 561 LPPKIDPTVTMMQVEEKPDVTYSDVGG 641
L ++DP V++M+VE+ P +Y+D+GG
Sbjct: 207 LQDEVDPMVSVMKVEKAPLESYADIGG 233
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 468 VVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 641
++DL+D +I M V D K + P + TV E P+V++ D+GG
Sbjct: 435 IIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVV-----EVPNVSWEDIGG 487
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 468 VVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 641
++DL+D +I M V D K + P + TV E P+V++ D+GG
Sbjct: 435 IIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVV-----EVPNVSWEDIGG 487
>07_03_0943 -
22778877-22780970,22781376-22781480,22781481-22782059,
22782149-22782187,22782340-22782372
Length = 949
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = +3
Query: 396 CTKIINADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKI 575
C K N D K ++ K K V+DL P+D E + V + H + I
Sbjct: 701 CHKQYNVPPTDEKMVLKEKSQDKHVIDLNIPQVPSDYESAVSYIVPSSDKNTH-TMDRSI 759
Query: 576 DPTVTMMQVEEKPDVTYS 629
+ T + PD+ S
Sbjct: 760 HSSETNRMDDCLPDINAS 777
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 453 QFAKFVVDLQDSVAPTDIEEG 515
QFA F++D++D + P D+E G
Sbjct: 192 QFAIFLIDVRDGLQPLDLEVG 212
>11_04_0287 + 15796081-15796206,15796298-15796756
Length = 194
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 504 IEEGM-RVGVDRNKYQIHIP-LPPKIDPTVTMMQVEEKPDVTYSDVGG 641
+E+G R R + Q +P LPP+I PT+ + V + D GG
Sbjct: 125 VEDGYSRTSCPRRQRQRQLPSLPPRIGPTIAVTTVAPEAFTEVVDDGG 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,939,431
Number of Sequences: 37544
Number of extensions: 305170
Number of successful extensions: 878
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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