Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_F06
(783 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein comple... 285 9e-77
AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop ... 285 9e-77
AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein. 285 9e-77
BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein. 273 5e-73
AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP... 273 5e-73
AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protei... 273 5e-73
AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein. 273 5e-73
BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein. 272 7e-73
AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens ... 186 6e-47
BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein. 75 2e-13
BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein... 42 0.002
AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein... 42 0.002
AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein... 42 0.002
AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex be... 42 0.002
AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein... 42 0.002
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 38 0.031
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 38 0.031
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 38 0.031
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 38 0.031
U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein. 38 0.041
BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein... 38 0.041
AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B sub... 38 0.041
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 33 1.5
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 33 1.5
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 33 1.5
BC105005-1|AAI05006.1| 773|Homo sapiens diacylglycerol kinase, ... 33 1.5
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 33 1.5
AC073258-1|AAS07533.1| 413|Homo sapiens unknown protein. 33 1.5
AB018261-1|BAA34438.1| 742|Homo sapiens KIAA0718 protein protein. 33 1.5
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 32 2.7
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 32 2.7
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 32 2.7
>BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein complex,
subunit gamma protein.
Length = 874
Score = 285 bits (700), Expect = 9e-77
Identities = 140/237 (59%), Positives = 175/237 (73%), Gaps = 4/237 (1%)
Frame = +2
Query: 83 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 250
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 251 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 430
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 431 RPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINE 610
R A+RALC ITDSTMLQAIERYMKQAIVDK P D+V+RW+NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 611 AQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
AQEA +SD++MV YHAL ++ R+NDRL+ K+I+K+ R ++SP+ C+ IR A+
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVAS 237
>AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop
protein.
Length = 874
Score = 285 bits (700), Expect = 9e-77
Identities = 140/237 (59%), Positives = 175/237 (73%), Gaps = 4/237 (1%)
Frame = +2
Query: 83 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 250
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 251 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 430
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 431 RPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINE 610
R A+RALC ITDSTMLQAIERYMKQAIVDK P D+V+RW+NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 611 AQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
AQEA +SD++MV YHAL ++ R+NDRL+ K+I+K+ R ++SP+ C+ IR A+
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVAS 237
>AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein.
Length = 874
Score = 285 bits (700), Expect = 9e-77
Identities = 140/237 (59%), Positives = 175/237 (73%), Gaps = 4/237 (1%)
Frame = +2
Query: 83 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 250
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 251 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 430
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 431 RPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINE 610
R A+RALC ITDSTMLQAIERYMKQAIVDK P D+V+RW+NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 611 AQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
AQEA +SD++MV YHAL ++ R+NDRL+ K+I+K+ R ++SP+ C+ IR A+
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVAS 237
>BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein.
Length = 726
Score = 273 bits (669), Expect = 5e-73
Identities = 133/232 (57%), Positives = 169/232 (72%), Gaps = 4/232 (1%)
Frame = +2
Query: 98 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 265
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 266 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 445
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 446 RALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAM 625
RALC ITD TMLQAIERYMKQAIVDK D+V+RWINEAQEA
Sbjct: 126 RALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAA 185
Query: 626 TSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
+SD++MV YHAL V+ R+NDRL+ K++ K ++ ++S + C+ IR A+
Sbjct: 186 SSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIAS 237
>AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP
protein.
Length = 871
Score = 273 bits (669), Expect = 5e-73
Identities = 133/232 (57%), Positives = 169/232 (72%), Gaps = 4/232 (1%)
Frame = +2
Query: 98 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 265
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 266 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 445
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 446 RALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAM 625
RALC ITD TMLQAIERYMKQAIVDK D+V+RWINEAQEA
Sbjct: 126 RALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAA 185
Query: 626 TSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
+SD++MV YHAL V+ R+NDRL+ K++ K ++ ++S + C+ IR A+
Sbjct: 186 SSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIAS 237
>AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protein
gamma2-COP protein.
Length = 871
Score = 273 bits (669), Expect = 5e-73
Identities = 133/232 (57%), Positives = 169/232 (72%), Gaps = 4/232 (1%)
Frame = +2
Query: 98 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 265
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 266 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 445
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 446 RALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAM 625
RALC ITD TMLQAIERYMKQAIVDK D+V+RWINEAQEA
Sbjct: 126 RALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAA 185
Query: 626 TSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
+SD++MV YHAL V+ R+NDRL+ K++ K ++ ++S + C+ IR A+
Sbjct: 186 SSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIAS 237
>AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein.
Length = 871
Score = 273 bits (669), Expect = 5e-73
Identities = 133/232 (57%), Positives = 169/232 (72%), Gaps = 4/232 (1%)
Frame = +2
Query: 98 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 265
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 266 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 445
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 446 RALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAM 625
RALC ITD TMLQAIERYMKQAIVDK D+V+RWINEAQEA
Sbjct: 126 RALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAA 185
Query: 626 TSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
+SD++MV YHAL V+ R+NDRL+ K++ K ++ ++S + C+ IR A+
Sbjct: 186 SSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIAS 237
>BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein.
Length = 865
Score = 272 bits (668), Expect = 7e-73
Identities = 130/222 (58%), Positives = 164/222 (73%)
Frame = +2
Query: 116 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 295
SN FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+
Sbjct: 10 SNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR 69
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 475
LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD T
Sbjct: 70 LFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGT 129
Query: 476 MLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYH 655
MLQAIERYMKQAIVDK D+V+RWINEAQEA +SD++MV YH
Sbjct: 130 MLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYH 189
Query: 656 ALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
AL V+ R+NDRL+ K++ K ++ ++S + C+ IR A+
Sbjct: 190 ALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIAS 231
>AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ12872 fis, clone NT2RP2003760, highly similar to
COATOMER GAMMA SUBUNIT. ).
Length = 799
Score = 186 bits (454), Expect = 6e-47
Identities = 91/164 (55%), Positives = 115/164 (70%)
Frame = +2
Query: 290 TKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITD 469
T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD
Sbjct: 2 TRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITD 61
Query: 470 STMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVS 649
TMLQAIERYMKQAIVDK D+V+RWINEAQEA +SD++MV
Sbjct: 62 GTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQ 121
Query: 650 YHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAA 781
YHAL V+ R+NDRL+ K++ K ++ +S + C+ IR A+
Sbjct: 122 YHALGVLYHLRKNDRLAVSKMLNKFTKSGPKSQFAYCMLIRIAS 165
>BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein.
Length = 699
Score = 75.4 bits (177), Expect = 2e-13
Identities = 31/62 (50%), Positives = 47/62 (75%)
Frame = +2
Query: 596 RWINEAQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRF 775
RW+NEAQEA +SD++MV YHAL ++ R+NDRL+ K+I+K+ R ++SP+ C+ IR
Sbjct: 1 RWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRV 60
Query: 776 AA 781
A+
Sbjct: 61 AS 62
>BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 206 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 382
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 383 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 520
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 262
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 206 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 382
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 383 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 520
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 206 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 382
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 383 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 520
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex beta4
subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 206 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 382
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 383 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 520
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit variant protein.
Length = 771
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 206 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 382
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 63 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 117
Query: 383 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 520
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 118 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 159
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein.
Length = 1081
Score = 37.9 bits (84), Expect = 0.041
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein
complex 3, beta 2 subunit protein.
Length = 1082
Score = 37.9 bits (84), Expect = 0.041
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B
subunit protein.
Length = 1082
Score = 37.9 bits (84), Expect = 0.041
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 463
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 463
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 463
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC105005-1|AAI05006.1| 773|Homo sapiens diacylglycerol kinase,
beta 90kDa protein.
Length = 773
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 667 CCWCKTQR*IINCETHYKTSSDTSSLALHTLPPNTLC 777
C WC+ C +H K D L H LPP T+C
Sbjct: 339 CVWCQITL-HNKCASHLKPECDCGPLKDHILPPTTIC 374
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 463
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>AC073258-1|AAS07533.1| 413|Homo sapiens unknown protein.
Length = 413
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 667 CCWCKTQR*IINCETHYKTSSDTSSLALHTLPPNTLC 777
C WC+ C +H K D L H LPP T+C
Sbjct: 273 CVWCQITL-HNKCASHLKPECDCGPLKDHILPPTTIC 308
>AB018261-1|BAA34438.1| 742|Homo sapiens KIAA0718 protein protein.
Length = 742
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 667 CCWCKTQR*IINCETHYKTSSDTSSLALHTLPPNTLC 777
C WC+ C +H K D L H LPP T+C
Sbjct: 277 CVWCQITL-HNKCASHLKPECDCGPLKDHILPPTTIC 312
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 457
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 457
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 457
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 928 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 979
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,703,485
Number of Sequences: 237096
Number of extensions: 2479909
Number of successful extensions: 4747
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4741
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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