Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_F06
(783 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p pro... 301 5e-82
AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer pro... 299 2e-81
AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA... 299 2e-81
BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p pro... 298 5e-81
AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB... 298 5e-81
BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p pro... 40 0.004
AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protei... 40 0.004
AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein. 40 0.004
AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA... 40 0.004
>AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p
protein.
Length = 878
Score = 301 bits (740), Expect = 5e-82
Identities = 146/234 (62%), Positives = 179/234 (76%)
Frame = +2
Query: 77 SIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELT 256
S + + D ++ SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L
Sbjct: 3 SFRREKDDEEDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLV 62
Query: 257 TQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRP 436
+EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR
Sbjct: 63 AREATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRA 122
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQ 616
AAIRALCSITD+TMLQA+ERYMKQ IVDKN D+V+RW NEAQ
Sbjct: 123 AAIRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQ 182
Query: 617 EAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA 778
EA+ SD++MV YHAL ++ R++DRL+ KL+ KL R ++SPY +C+ IR A
Sbjct: 183 EALNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIA 236
>AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer
protein gamma subunit protein.
Length = 879
Score = 299 bits (735), Expect = 2e-81
Identities = 148/232 (63%), Positives = 177/232 (76%), Gaps = 3/232 (1%)
Frame = +2
Query: 92 RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 262
R EED SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 263 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 442
EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AA
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125
Query: 443 IRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEA 622
IRALCSITD+TMLQA+ERYMKQ IVDKN D+V+RW NEAQEA
Sbjct: 126 IRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEA 185
Query: 623 MTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA 778
+ SD++MV YHAL ++ R++DRL+ KL+ KL R ++SPY +C+ IR A
Sbjct: 186 LNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIA 237
>AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA,
isoform A protein.
Length = 879
Score = 299 bits (735), Expect = 2e-81
Identities = 148/232 (63%), Positives = 177/232 (76%), Gaps = 3/232 (1%)
Frame = +2
Query: 92 RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 262
R EED SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 263 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 442
EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AA
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125
Query: 443 IRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEA 622
IRALCSITD+TMLQA+ERYMKQ IVDKN D+V+RW NEAQEA
Sbjct: 126 IRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEA 185
Query: 623 MTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA 778
+ SD++MV YHAL ++ R++DRL+ KL+ KL R ++SPY +C+ IR A
Sbjct: 186 LNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIA 237
>BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p
protein.
Length = 883
Score = 298 bits (732), Expect = 5e-81
Identities = 144/221 (65%), Positives = 173/221 (78%)
Frame = +2
Query: 116 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 295
SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 475
LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AAIRALCSITD+T
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140
Query: 476 MLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYH 655
MLQA+ERYMKQ IVDKN D+V+RW NEAQEA+ SD++MV YH
Sbjct: 141 MLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEALNSDNIMVQYH 200
Query: 656 ALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA 778
AL ++ R++DRL+ KL+ KL R ++SPY +C+ IR A
Sbjct: 201 ALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIA 241
>AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB,
isoform B protein.
Length = 883
Score = 298 bits (732), Expect = 5e-81
Identities = 144/221 (65%), Positives = 173/221 (78%)
Frame = +2
Query: 116 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 295
SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 296 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 475
LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AAIRALCSITD+T
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140
Query: 476 MLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYH 655
MLQA+ERYMKQ IVDKN D+V+RW NEAQEA+ SD++MV YH
Sbjct: 141 MLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEALNSDNIMVQYH 200
Query: 656 ALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA 778
AL ++ R++DRL+ KL+ KL R ++SPY +C+ IR A
Sbjct: 201 ALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIA 241
>BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p
protein.
Length = 1159
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 55 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 114
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI S ++ + ++ + D +P
Sbjct: 115 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 145
>AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protein
protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
>AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
>AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA
protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 436
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 437 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 529
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,878,535
Number of Sequences: 53049
Number of extensions: 766708
Number of successful extensions: 1950
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -