Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_F06
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical pr... 264 4e-71
Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical pr... 263 9e-71
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 29 2.8
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z50739-3|CAA90603.2| 286|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical ... 28 6.6
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 28 6.6
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical
protein T14G10.5b protein.
Length = 883
Score = 264 bits (648), Expect = 4e-71
Identities = 128/236 (54%), Positives = 167/236 (70%)
Frame = +2
Query: 71 EQSIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 250
+ S MK + +E NV+ +LDKT++LQEAR FN TP++ RKC IL+K++Y++ QGE
Sbjct: 10 QSSRMKTNKKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGES 69
Query: 251 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 430
+ EAT+ FF TKL+QSKDV LRR+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D Y
Sbjct: 70 IGRTEATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLY 129
Query: 431 RPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINE 610
R AAIRALC ITD+ MLQ IERYMKQAIVD+N ++VRRW NE
Sbjct: 130 RAAAIRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANE 189
Query: 611 AQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA 778
QEA++SD+ MV YHALA++ R NDRL+ KL+ K ++ +RSPY +C IR A
Sbjct: 190 VQEAVSSDNHMVQYHALALLYQIRANDRLAVNKLVQKFSKNALRSPYAVCYLIRIA 245
>Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical
protein T14G10.5a protein.
Length = 870
Score = 263 bits (645), Expect = 9e-71
Identities = 127/232 (54%), Positives = 165/232 (71%)
Frame = +2
Query: 83 MKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 262
MK + +E NV+ +LDKT++LQEAR FN TP++ RKC IL+K++Y++ QGE +
Sbjct: 1 MKTNKKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRT 60
Query: 263 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 442
EAT+ FF TKL+QSKDV LRR+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D YR AA
Sbjct: 61 EATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAA 120
Query: 443 IRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEA 622
IRALC ITD+ MLQ IERYMKQAIVD+N ++VRRW NE QEA
Sbjct: 121 IRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEA 180
Query: 623 MTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA 778
++SD+ MV YHALA++ R NDRL+ KL+ K ++ +RSPY +C IR A
Sbjct: 181 VSSDNHMVQYHALALLYQIRANDRLAVNKLVQKFSKNALRSPYAVCYLIRIA 232
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/102 (19%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +2
Query: 203 IHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYL---CIKELSP---M 364
I L K++Y++ GE+ T+Q + + S + L++++ + C+ + +
Sbjct: 39 IEALKKLIYMILNGEK-TSQSM--LMYVIRFCLPSNEHTLKKVLLIFWECVPKTDSNGKL 95
Query: 365 AQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 490
++I+V + KD+ ++ R + +R LC + + +L+ +
Sbjct: 96 LHEMILVCDAYRKDLQHPNEFVRGSTLRFLCKLREPELLEPL 137
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 300 NSFVVAKNISVASCVVNSSPWFSK*SIFVKIWMHFLGCT 184
NS+V+ KN++ VVN+ PW +F +++ + T
Sbjct: 486 NSYVLKKNLNTVLIVVNNYPWKYGMGLFQRLYEPYFAST 524
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 29.1 bits (62), Expect = 3.7
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +2
Query: 65 LKEQSIMKARRDGKEEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLN 238
L E A +ED+ F+N ++T + L+ R + + K + ++++ L ++
Sbjct: 793 LAEYCYEAATETAIQEDTIAFENSNRTAIEALENVRTVRALNLED-KIMSLISEHLQKIH 851
Query: 239 QG--EELTTQEATDIFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDM 409
+ + Q A + + LF V + YL + KE++PM ++++T S+T +M
Sbjct: 852 KSYFKRAIIQGAANGLSLSCFLFVYS-VSFKFGTYLALRKEVAPMDTYLVLMTLSMTANM 910
Query: 410 TGKDDEYRP 436
G Y P
Sbjct: 911 AGSAAAYLP 919
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 29.1 bits (62), Expect = 3.7
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +2
Query: 65 LKEQSIMKARRDGKEEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLN 238
L E A +ED+ F+N ++T + L+ R + + K + ++++ L ++
Sbjct: 852 LAEYCYEAATETAIQEDTIAFENSNRTAIEALENVRTVRALNLED-KIMSLISEHLQKIH 910
Query: 239 QG--EELTTQEATDIFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDM 409
+ + Q A + + LF V + YL + KE++PM ++++T S+T +M
Sbjct: 911 KSYFKRAIIQGAANGLSLSCFLFVYS-VSFKFGTYLALRKEVAPMDTYLVLMTLSMTANM 969
Query: 410 TGKDDEYRP 436
G Y P
Sbjct: 970 AGSAAAYLP 978
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 28.7 bits (61), Expect = 5.0
Identities = 27/134 (20%), Positives = 55/134 (41%), Gaps = 1/134 (0%)
Frame = -1
Query: 744 ERTGVRASFVMSFTVDNLSLRLAPATTAKAW*ETIT*SEVMASCASFIQRRTKSGTVADR 565
++ G+ + T D L + L T +E++A+ A ++ ++GT D
Sbjct: 23 KQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITAELLAASAGKLKLVGRAGTGVDN 82
Query: 564 CKAETSAADPTAGFLSTIACFMYLS-IACSIVLSVMLHKARMAAGRYSSSLPVMSFVSEE 388
++A+ + A + + C+++LS+ H + AA + F+ EE
Sbjct: 83 IDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKWARKDFMGEE 142
Query: 387 VTMITSCAIGLNSL 346
V T +GL +
Sbjct: 143 VYGRTLAVLGLGRI 156
>Z50739-3|CAA90603.2| 286|Caenorhabditis elegans Hypothetical
protein F13D2.4 protein.
Length = 286
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 131 NLDKTTLLQEARYFNSTPVH 190
+LDKTT+ EA+YF+ PV+
Sbjct: 225 DLDKTTVTVEAKYFHGKPVN 244
>AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical
protein F53A10.2c protein.
Length = 811
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 633 SEVMASCASF-IQRRTKSGTVADRCKAETSAADPTAGFLSTIAC 505
+EV++SC F I RT+ GT+ + A A P+A ++ + C
Sbjct: 289 TEVISSCDHFRIILRTRKGTIHEIVSATALADRPSASRMAKLLC 332
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 633 SEVMASCASF-IQRRTKSGTVADRCKAETSAADPTAGFLSTIAC 505
+EV++SC F I RT+ GT+ + A A P+A ++ + C
Sbjct: 220 TEVISSCDHFRIILRTRKGTIHEIVSATALADRPSASRMAKLLC 263
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 27.9 bits (59), Expect = 8.7
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Frame = +2
Query: 107 EEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLNQG--EELTTQEATD 274
+ED+ F+N ++T + L+ R + + K + ++++ L +++ + Q A +
Sbjct: 866 QEDTIAFENSNRTAIEALENMRTVRALNLED-KIMSLISEHLQKIHKSYFKRAIIQGAAN 924
Query: 275 IFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDMTGKDDEYRP 436
+ LF V + YL + KE++PM +I+ T S+T +M G Y P
Sbjct: 925 GLSLSCYLFVYS-VSFKFGTYLALRKEVAPMDTYLILETLSMTANMAGSAAAYLP 978
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,439,784
Number of Sequences: 27780
Number of extensions: 396006
Number of successful extensions: 1036
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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