Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_F01
         (814 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.95 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.8  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 661 LFPDQTCG*DHRLMDCRGSC 720
           L PDQ C  D+R  DC  +C
Sbjct: 547 LSPDQFCNGDNRPPDCGQNC 566


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 667 PDQTCG*DHRLMDCRGSC 720
           P Q C  D+R  DC+ +C
Sbjct: 549 PQQFCNGDNRPADCQQNC 566


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 308 EQKSFYWENGYLVIKELI 361
           E+  FYW  G+L+I+  I
Sbjct: 318 ERIYFYWSFGFLIIQRFI 335


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 308 EQKSFYWENGYLVIK 352
           E+  FYW  G+L+++
Sbjct: 318 ERIYFYWSFGFLIVR 332


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 308 EQKSFYWENGYLVIK 352
           E+  FYW  G+L+++
Sbjct: 318 ERIYFYWSFGFLIVR 332


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 275 SELPQNYRLSEEQKSFYWEN 334
           SEL +N  LSE Q   +++N
Sbjct: 188 SELAENLGLSERQIKIWFQN 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,425
Number of Sequences: 336
Number of extensions: 4152
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)