Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_F01
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    26   1.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   1.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.5  

>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +2

Query: 410 KGIVDSPVMIVKEQALFEKNLKPEEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDI 589
           KG  D   M    Q L   + KP   +N + +   D   + + EHP LL  I     +  
Sbjct: 102 KGETDEEYMWCIRQTLIFPDGKP---LNMILDDGGDLTNLVHAEHPELLKEIRGLSEETT 158

Query: 590 TAIHSMF 610
           T +H+++
Sbjct: 159 TGVHNLY 165


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 344 VIKELIDFTSLYSYKQRFLQICKGIVDSPVMIVKEQAL 457
           V +++   T LY    R+LQ+CKG+ +S   I   Q++
Sbjct: 223 VCRDIEYLTRLY-VSYRYLQLCKGVEESERTIANLQSV 259


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -2

Query: 576 INCEITSNSLGCS--P*VMNTSSYKISWSLLMYSSGFKFFSKSACSLTIITGLS 421
           I C ++ + L CS  P  +N   +      +++S  F FFS + C+L   T +S
Sbjct: 35  IYCFVSPSCLECSSVPLFINFI-FMFLLHFVLFSFSFPFFSFAPCTLASATEIS 87


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 667 PDQTCG*DHRLMDCRGSC 720
           P+Q C  D+R  DC  +C
Sbjct: 591 PEQFCNGDNRPADCGANC 608


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,204
Number of Sequences: 2352
Number of extensions: 17807
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)