Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_F01
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          27   0.27 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.9  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    22   7.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   7.8  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 647 HQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYV--IPKSHKQXILYPHGD 793
           H+ + YF + P ++ I S   ++H+ K N  +       ++++ +++ H D
Sbjct: 75  HKGIVYFELLPPNRTINSVVYIEHLTKLNNAIEEKRFELTNRKGVVFHHDD 125


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
 Frame = +2

Query: 260 PNPVFSELPQNYRLSEEQKSFYWENGYLVIKELIDFTSLYSY-KQRFLQICKGIV--DSP 430
           P+P  S +   Y +++    F+     LV+ E+  FT+  ++ + R      G+V   S 
Sbjct: 131 PDPSDSTMAIPYAVTKSAMFFFAATSLLVVAEVCYFTAHVTHPRHRLCVFVAGVVFIVSG 190

Query: 431 VMIVKEQALFEKNLKPEEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMF 610
           ++++    ++    K E          +     TY      L  +S FI  ++   +++F
Sbjct: 191 LLMLVGMVMYISVFKAEVGSKLRPRSSFQGPPFTYRYGFSFLLYVSGFITTEVAGTYAIF 250

Query: 611 I 613
           +
Sbjct: 251 L 251



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 642 GCLAVPGGLLMNML*IAVMSSPINCEITSNSLGCSP*VMNTSSYKISWSLLMYSSGF 472
           G + +  GLLM ++ + +  S    E+ S     S       +Y+  +S L+Y SGF
Sbjct: 183 GVVFIVSGLLM-LVGMVMYISVFKAEVGSKLRPRSSFQGPPFTYRYGFSFLLYVSGF 238


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 734 GCLYVIP--KSHKQXILYPHGDVPEAGN 811
           GC  VI   K H+Q  +YP+ DV +  N
Sbjct: 437 GCTVVIGTFKLHRQPHIYPNPDVFDPDN 464


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 536 GEHPRLLDVISQFIGDDITAIHSMFINKPP 625
           G+   + D +S FI   ITAI    IN+ P
Sbjct: 47  GDLKGIKDKLSHFIESGITAIWLSPINRSP 76


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 812 SYRPPAHHHGGIEYXAYETLE*HTDSHY 729
           S+  P    G   Y  Y+TLE   + HY
Sbjct: 2   SHCVPERKRGRQTYTRYQTLELEKEFHY 29


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +2

Query: 413 GIVDSPVMIVKEQALFEKNLKPEEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGD--D 586
           G+  S V+I  ++         E   NKL+  L   +   + +HP +L  + + I D   
Sbjct: 338 GLFCSVVVIAADRPGLRNTELVERMHNKLRNALQTVLAQNHPQHPDILRELLKKIPDLRT 397

Query: 587 ITAIHS 604
           +  +HS
Sbjct: 398 LNTLHS 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,826
Number of Sequences: 438
Number of extensions: 4743
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)