Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_E24
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0649 + 30861946-30862179,30862702-30862824,30863104-308631... 72 5e-13
10_08_0930 - 21641818-21642240,21642731-21642820,21642902-216429... 69 3e-12
06_01_0372 + 2684208-2684390,2684867-2684968,2685197-2685290,268... 62 4e-10
05_06_0131 - 25888434-25888931,25889105-25889155,25889249-258893... 54 1e-07
06_02_0081 - 11527339-11527652,11528166-11528272,11528361-115284... 44 2e-04
12_01_0219 - 1651833-1651987,1652172-1652471,1652889-1652967,165... 37 0.013
11_01_0217 - 1698721-1698875,1699122-1699421,1699840-1699918,169... 37 0.013
05_01_0120 - 828834-831143 37 0.017
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 36 0.023
01_03_0017 + 11677029-11677100,11677992-11678030,11678169-116783... 36 0.023
12_02_0068 + 13155402-13155568,13155674-13155767,13157748-131577... 35 0.053
02_05_0549 + 29900714-29900953,29902224-29902323,29902578-299027... 33 0.28
12_01_0078 - 639421-639624,639706-639876,640392-640597,640985-64... 32 0.50
11_01_0077 - 602192-602395,602477-602647,603161-603366,605457-60... 32 0.50
12_02_0019 - 12366259-12366819,12367653-12367685,12368294-123683... 31 0.66
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 31 1.1
11_01_0730 - 6037375-6037509,6037892-6038019,6038339-6038423,603... 30 1.5
12_01_0584 - 4762476-4762613,4763986-4764075,4765048-4765146,476... 30 2.0
01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678 30 2.0
08_01_0264 - 2142856-2143152,2143667-2143829,2143915-2143992,214... 29 2.6
01_04_0135 - 16494605-16494618,16494676-16494829 29 4.6
06_01_0744 + 5565939-5566249,5566383-5566476,5569067-5569124,556... 28 6.1
05_04_0307 + 20066169-20066410,20066803-20066858,20067490-200675... 28 8.1
02_05_1261 + 35305909-35307042,35307779-35307968,35308550-35308818 28 8.1
01_02_0009 - 10135444-10135536,10135860-10135909,10136292-101369... 28 8.1
>01_06_0649 +
30861946-30862179,30862702-30862824,30863104-30863197,
30863819-30863901,30863984-30864073,30864176-30864562,
30864903-30864991,30867801-30867907,30868431-30868822
Length = 532
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/111 (36%), Positives = 60/111 (54%)
Frame = +1
Query: 58 WREHKVEFLQLATTDIFEAPNQDKLFEGVVFINRFLPLDNKLSGVPADVGQINTGTVYVH 237
++ H ++ L + T D AP + + + FI+R N G G YVH
Sbjct: 118 YQAHGIDHLIIPTRDYLFAPALQDICQAIDFIHR-----NASEG----------GITYVH 162
Query: 238 CKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHILLHTKQWEALDIF 390
CKAGR RS T+V CYL+ SP A++++RS RP +LL QW+A+++F
Sbjct: 163 CKAGRGRSTTIVLCYLIKYRSMSPEAALDHVRSIRPRVLLAPSQWQAVNVF 213
>10_08_0930 -
21641818-21642240,21642731-21642820,21642902-21642984,
21643512-21643605,21644366-21644488,21644893-21645168
Length = 362
Score = 69.3 bits (162), Expect = 3e-12
Identities = 44/117 (37%), Positives = 62/117 (52%)
Frame = +1
Query: 58 WREHKVEFLQLATTDIFEAPNQDKLFEGVVFINRFLPLDNKLSGVPADVGQINTGTVYVH 237
+ H +E L L T D AP+ + L FI+R N L G YVH
Sbjct: 132 YEAHGIENLVLPTRDYLYAPSFENLCRAADFIHR-----NALCGK----------LTYVH 176
Query: 238 CKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHILLHTKQWEALDIFHRQHVR 408
CKAGR RS T+V CYL+ +P EA E++R RRP +LL + Q +A++ F++ V+
Sbjct: 177 CKAGRGRSTTVVLCYLVQYKQMTPAEAYEHVRLRRPRVLLASAQRQAVEQFYQLRVK 233
>06_01_0372 +
2684208-2684390,2684867-2684968,2685197-2685290,
2685450-2685532,2685684-2685773,2686931-2687173
Length = 264
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +1
Query: 229 YVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHILLHTKQWEALDIFHRQHVR 408
Y+HCKAGR RS T+V CYL+ +P A E++RS+R +LL QW + F +++
Sbjct: 136 YIHCKAGRGRSTTIVLCYLVKYKNMTPSTAFEHVRSKRARVLLTRSQWRVVQDFSKKNAE 195
Query: 409 T*PAPTINN 435
PT+ +
Sbjct: 196 A-ELPTVTS 203
>05_06_0131 -
25888434-25888931,25889105-25889155,25889249-25889331,
25889733-25889826,25890188-25890310,25890909-25891154
Length = 364
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/93 (34%), Positives = 49/93 (52%)
Frame = +1
Query: 58 WREHKVEFLQLATTDIFEAPNQDKLFEGVVFINRFLPLDNKLSGVPADVGQINTGTVYVH 237
++ H + L++ T D AP+ + + + V FI+R N G G+ YVH
Sbjct: 122 YQAHGINHLEIPTRDYLFAPSLEDICQAVDFIHR-----NASQG----------GSTYVH 166
Query: 238 CKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRS 336
CKAGR RS T+V CYL+ +P A+++ RS
Sbjct: 167 CKAGRGRSTTIVLCYLIKYRNMTPEAALDHARS 199
>06_02_0081 -
11527339-11527652,11528166-11528272,11528361-11528418,
11529240-11529267,11530233-11530499
Length = 257
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 226 VYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHILL 357
V VHC +G++RSA V +LM GW + ++++ RRP + L
Sbjct: 108 VLVHCMSGKSRSAAFVIAFLMKTKGWRLSQCFQWVKERRPQVQL 151
>12_01_0219 -
1651833-1651987,1652172-1652471,1652889-1652967,
1653047-1653111,1653236-1653288,1653666-1654084
Length = 356
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 220 GTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMR 333
G V VHC AG +RSAT++ YLM S EA+E ++
Sbjct: 127 GNVLVHCFAGVSRSATIIVAYLMRTEQKSLEEALESLK 164
>11_01_0217 -
1698721-1698875,1699122-1699421,1699840-1699918,
1699998-1700062,1700187-1700239,1700654-1701072
Length = 356
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 220 GTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMR 333
G V VHC AG +RSAT++ YLM S EA+E ++
Sbjct: 127 GNVLVHCFAGVSRSATIIVAYLMRTEQKSLEEALESLK 164
>05_01_0120 - 828834-831143
Length = 769
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 220 GTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRR 342
G V+VHC G +RS +LV YLM + G S +A + +++ R
Sbjct: 224 GRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQLVKAAR 264
>01_03_0205 +
13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 220 GTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRS--RRPH 348
G V VHC G++RSAT+V YLM++ ++ EA ++ RR H
Sbjct: 706 GKVLVHCFEGKSRSATVVLAYLMLRKKFTLLEAWNMLKKVHRRAH 750
>01_03_0017 +
11677029-11677100,11677992-11678030,11678169-11678341,
11679068-11679284,11679518-11679688,11679781-11679941,
11680025-11681069,11681320-11681466,11681547-11681774,
11681863-11682020,11682124-11682493
Length = 926
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 220 GTVYVHCKAGRTRSATLVGCYLMMKNG 300
G V VHC G++RSAT+V YLM++ G
Sbjct: 779 GKVLVHCFEGKSRSATIVLAYLMLRKG 805
>12_02_0068 +
13155402-13155568,13155674-13155767,13157748-13157771,
13157956-13158013,13158123-13158166,13158254-13158481
Length = 204
Score = 35.1 bits (77), Expect = 0.053
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +1
Query: 58 WREHKVEFLQLATTDIFE---APNQDKLFEGVVFINRFLPLDNKLSGVPADVGQINTGTV 228
+ E EFL+ +F+ N+ L G N +P+D + G + + V
Sbjct: 63 YMETNAEFLKAEGIRLFQFGIEGNKLCLTTGEEDPNVSIPVD-AIMGALRVILDVRNHPV 121
Query: 229 YVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMR 333
+HCK G+ R+ LVGC+ ++N EY R
Sbjct: 122 LIHCKRGKHRTGCLVGCFRKLQNWCLSSVFEEYHR 156
>02_05_0549 +
29900714-29900953,29902224-29902323,29902578-29902719,
29902720-29902826,29903179-29903480
Length = 296
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 253 TRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHILL 357
+RSA +V YLM GW ++ ++++ RRP + L
Sbjct: 160 SRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQVQL 194
>12_01_0078 -
639421-639624,639706-639876,640392-640597,640985-641100,
641669-641855,642104-642338
Length = 372
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 220 GTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRP 345
G VYVHC AG R+ + Y+ + A E + S+RP
Sbjct: 277 GRVYVHCTAGLGRAPAVAIAYMFWFENMNLKTAYEKLTSKRP 318
>11_01_0077 -
602192-602395,602477-602647,603161-603366,605457-605682
Length = 268
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 220 GTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRP 345
G VYVHC AG R+ + Y+ A E + S+RP
Sbjct: 173 GRVYVHCTAGLGRAPAVAIAYMFWFENMDLRTAYEKLTSKRP 214
>12_02_0019 -
12366259-12366819,12367653-12367685,12368294-12368363,
12368582-12368712,12369627-12369673,12369803-12369879,
12369963-12370027,12370105-12370191,12370300-12370389,
12370972-12371037,12371608-12371664,12371749-12371850,
12373018-12373554
Length = 640
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 226 VYVHCKAGRTRSATLVGCYLM-MKNGWSPHEAVEYMRSRR 342
V VHCKAG+ R+ ++ L+ +K + E++EY +R
Sbjct: 261 VVVHCKAGKARTGLMISSLLLYLKFFPTAEESIEYYNQKR 300
>03_02_0234 +
6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -1
Query: 375 LPLLRVEKYVWTPRSHVLHRFVG*PTVFHHKVAAHERGAPRPTRLAVNVYGAGVDLPHVG 196
LP + + K+ V+ V PT F V A+ R R A+ + A DLP VG
Sbjct: 731 LPSMVLPKFPLPTHDAVVRGIV--PTTFSQSVVAYNEVDTRCLRKALLLADAISDLPKVG 788
Query: 195 RDSRKFVVQ 169
D K V++
Sbjct: 789 NDQPKDVIE 797
>11_01_0730 -
6037375-6037509,6037892-6038019,6038339-6038423,
6038525-6038614,6040015-6040113,6040207-6040335,
6041341-6041463,6041549-6041711,6042331-6042380,
6042593-6042706,6042993-6043199,6043275-6043412,
6044708-6044770,6044845-6044928,6045014-6045094,
6045212-6045363,6045479-6045614,6045991-6046107
Length = 697
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +1
Query: 214 NTGTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHILLHTKQWEALDIFH 393
N + VHC G R+ ++ YLM EA+ RRP + EAL F+
Sbjct: 224 NPKYILVHCTHGHNRTGFMIIHYLMRTQVSCVAEAINIFAKRRPPGIYKRDYIEALYSFY 283
Query: 394 RQ 399
+
Sbjct: 284 HE 285
>12_01_0584 -
4762476-4762613,4763986-4764075,4765048-4765146,
4766032-4766154,4766243-4766405,4767307-4767356,
4767826-4767942,4769477-4769683,4769763-4769900,
4771212-4771274,4771358-4771441,4771933-4772084,
4772219-4772357,4772814-4772924
Length = 557
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 214 NTGTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHILLHTKQWEALDIFH 393
N + VHC G R+ ++ YLM S EA+ RRP + +A+ F+
Sbjct: 196 NPKYILVHCTHGHNRTGFMIVHYLMRTQLSSVTEALNIFAQRRPPGIYKNDYIQAIYSFY 255
Query: 394 RQ 399
+
Sbjct: 256 HE 257
>01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678
Length = 261
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 226 VYVHCKAGRTRSATLVGCYLMMKNGWSPH-EAVEYM-RSRRPHILLHTKQWEALD 384
VYVHC G RS ++ C L++ G + +A E M R +RP I +++ ++L+
Sbjct: 175 VYVHCAYGHGRSVCVM-CALLVALGLAEDWKAAEQMIREKRPSISMNSLHRKSLE 228
>08_01_0264 -
2142856-2143152,2143667-2143829,2143915-2143992,
2144097-2144162,2144941-2145098
Length = 253
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 394 CGIYRGPPTASCGEVCVDASISCTPP 317
CGI P A+CG DAS SC+ P
Sbjct: 27 CGILEDLPAAACGAFPWDASPSCSNP 52
>01_04_0135 - 16494605-16494618,16494676-16494829
Length = 55
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 259 SATLVGCYLMMKNGWSPHEAVEYMRSRRPHI 351
S T++ YLM K+ S A+ +RS+RP +
Sbjct: 3 SVTIIVAYLMKKHQMSLENALSLVRSKRPQV 33
>06_01_0744 +
5565939-5566249,5566383-5566476,5569067-5569124,
5569214-5569257,5569366-5569539
Length = 226
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 172 DNKLSGVPADVGQINTGTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMR 333
D+K+ V + + +HCK G+ R+ +VGC ++ EY R
Sbjct: 143 DDKIREALKVVLDVKNQPLLIHCKRGKHRTGCVVGCLRKLQKWCLSSVFDEYQR 196
>05_04_0307 +
20066169-20066410,20066803-20066858,20067490-20067581,
20068400-20068502,20068623-20068760,20068898-20069148
Length = 293
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +1
Query: 55 RWREHKVEFLQLATTDIFEAPNQDKLFEGVVFINR 159
+W EH++++L D+ +PN +++ + V ++NR
Sbjct: 205 KWGEHELDYLLFMVRDVELSPNPEEVAD-VKYVNR 238
>02_05_1261 + 35305909-35307042,35307779-35307968,35308550-35308818
Length = 530
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 507 EIRSSSVSDACMTHKRIFNLHPHHIVYGRSRSRPHVLSVEYIEGLPL 367
++ S S A M+H R + H HH G S S P E ++ +P+
Sbjct: 228 DVTSHRFSPATMSHPRSSSHHHHHQQPGSSLSSPDCEVFEPVKPVPV 274
>01_02_0009 -
10135444-10135536,10135860-10135909,10136292-10136901,
10137891-10138151
Length = 337
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 80 SYSWLQQIFLRP-PIKTNYSKESCL*TDSCRWTTNFRESLPTWGRSTPAPYTFTARRVGR 256
+Y WL++ F P P+ S + RW F + L GR P YT + RVGR
Sbjct: 229 AYLWLKRSFSGPDPLSLLISGIG----KAVRWPVGFVQKLFRSGR--PQGYTPSRGRVGR 282
Query: 257 GAPR 268
G+ R
Sbjct: 283 GSAR 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,031,209
Number of Sequences: 37544
Number of extensions: 483621
Number of successful extensions: 1246
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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