BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_E24
(693 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 25 3.0
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 25 3.0
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 25 3.0
AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450 pr... 24 4.0
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 6.9
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 24.6 bits (51), Expect = 3.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 313 EAVEYMRSRRPHILLHTKQWEALDI 387
+AVE +R + PH+L++ +W L I
Sbjct: 423 DAVECLRGKDPHVLVN-NEWGTLGI 446
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 24.6 bits (51), Expect = 3.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 313 EAVEYMRSRRPHILLHTKQWEALDI 387
+AVE +R + PH+L++ +W L I
Sbjct: 423 DAVECLRGKDPHVLVN-NEWGTLGI 446
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 24.6 bits (51), Expect = 3.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 313 EAVEYMRSRRPHILLHTKQWEALDI 387
+AVE +R + PH+L++ +W L I
Sbjct: 309 DAVECLRGKDPHVLVN-NEWGTLGI 332
>AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450
protein.
Length = 505
Score = 24.2 bits (50), Expect = 4.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 166 PLDNKLSGVPADVGQINTGTVYVHCKAGRTRSATLVGCYLMMK 294
PL N + GV +++ N + K G+ +SA LVG Y M+K
Sbjct: 42 PLGN-MKGVGSEI-HFNDVLNEAYAK-GKAQSAPLVGLYFMLK 81
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 6.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +2
Query: 206 GRSTPAPYTFTARRVGRGAPR---SWAA 280
GRSTP +++ G G PR SWA+
Sbjct: 1362 GRSTPRELLESSQPAGGGTPRGRHSWAS 1389
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,635
Number of Sequences: 2352
Number of extensions: 18256
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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