Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E24
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   0.68 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   1.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   1.6  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   4.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   4.8  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   4.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   4.8  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   8.4  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   8.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 363 EAVGGPRYIPQTTRADVTCSYHKQYGAG-VD*ICACVSYMR 482
           E V GP+Y+P T    +T +Y   +  G V  I  C+   R
Sbjct: 20  EKVRGPKYLPLTLIVPITLTYVVIFVTGFVGNIITCIVIWR 60


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 480 ACMTHKRIFNLHPHHIVYGRSRSRPHVLSVE 388
           +C+T  + +  HPH++V G+   +  V +VE
Sbjct: 101 SCVTKDQPYRPHPHNLV-GKEACKQGVCTVE 130


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 480 ACMTHKRIFNLHPHHIVYGRSRSRPHVLSVE 388
           +C+T  + +  HPH++V G+   +  V +VE
Sbjct: 101 SCVTKDQPYRPHPHNLV-GKEACKQGVCTVE 130


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 395 DNTCGRDLLLP*TIWCG 445
           DN     ++ P T+WCG
Sbjct: 22  DNELEERIIYPGTLWCG 38


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 395 DNTCGRDLLLP*TIWCG 445
           DN     ++ P T+WCG
Sbjct: 27  DNELEERIIYPGTLWCG 43


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 456 ICACVSYMRQRQRTSGFH 509
           IC CVS M   +  SG H
Sbjct: 10  ICVCVSAMTLDELKSGLH 27


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 395 DNTCGRDLLLP*TIWCG 445
           DN     ++ P T+WCG
Sbjct: 27  DNELEERIIYPGTLWCG 43


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 641 VSIIQFHSNNNNFNIRYISKIRLI 570
           +S I  ++NNNN+N +    I  I
Sbjct: 90  ISNISNYNNNNNYNKKLYYNINYI 113


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 641 VSIIQFHSNNNNFNIRYISKIRLI 570
           +S I  ++NNNN+N +    I  I
Sbjct: 328 ISNISNYNNNNNYNKKLYYNINYI 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,657
Number of Sequences: 438
Number of extensions: 4861
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)