Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_E23
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 271 3e-73
U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical p... 155 3e-38
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 67 2e-11
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 63 2e-10
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 63 2e-10
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 59 4e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 58 5e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 58 1e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 57 2e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 57 2e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 56 4e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 56 4e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 56 4e-08
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 54 2e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 53 2e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 53 2e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 52 6e-07
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 48 6e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 1e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 48 1e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 48 1e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 1e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 48 1e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 48 1e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 1e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 48 1e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 45 5e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical ... 41 0.001
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 38 0.011
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 38 0.011
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 38 0.011
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 38 0.011
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 37 0.014
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 31 0.95
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL009246-3|CAA15837.1| 248|Caenorhabditis elegans Hypothetical ... 30 2.2
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 30 2.2
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 30 2.2
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 30 2.2
U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore co... 29 2.9
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 29 2.9
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 28 6.7
AL021497-17|CAD56613.1| 138|Caenorhabditis elegans Hypothetical... 28 8.9
AF016436-2|AAC25898.1| 406|Caenorhabditis elegans Hypothetical ... 28 8.9
Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical pr... 23 9.1
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 271 bits (665), Expect = 3e-73
Identities = 124/242 (51%), Positives = 168/242 (69%), Gaps = 2/242 (0%)
Frame = +1
Query: 73 MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI 252
MTAFEEFG++PE+ A+ ++WTLPT VQ+EAIP ILGG D L+AAETGSGKTGAF LPI
Sbjct: 1 MTAFEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPI 60
Query: 253 LQIVWETLKDMQEGKTGKVITQTSSECTMSFFDRTDALAVTPDGLRCQSRNQKDWHGCRA 432
QIVWE K ++ + + S E ++ DR +L + GL C+SR K+WHG RA
Sbjct: 61 AQIVWERRKSAEKSQNSGQKPENSREFQLNREDRDVSLQIDKTGLNCESRVAKEWHGARA 120
Query: 433 TKGVHTKGAYYFEATVTDEGLCRVGWSTQAAKLDLGTDRLGYGFGGTGKKSNCKQFDDYG 612
T G++ G YY+E TVT +GLCRVGW+T + L +GTD +G+GGTGKKS K+FDDYG
Sbjct: 121 TAGLYGNGKYYYEVTVTRDGLCRVGWATLSGSLKIGTDFESFGYGGTGKKSFGKKFDDYG 180
Query: 613 EAYGMNDVIGCFLNLNSGEIRYSKNGEDLGVAFSLDSSXK--SDCYFPAVVLKNAXMSFN 786
++ NDV+GCFL+L+ +I +SKNG VA+ +D K + C +PA++ +N+ + N
Sbjct: 181 TSFTTNDVLGCFLDLDELKIWWSKNGVQFPVAYQIDKKFKTAATCLYPAILCQNSGLGVN 240
Query: 787 FG 792
FG
Sbjct: 241 FG 242
>U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical
protein F20A1.9 protein.
Length = 433
Score = 155 bits (376), Expect = 3e-38
Identities = 70/146 (47%), Positives = 97/146 (66%), Gaps = 2/146 (1%)
Frame = +1
Query: 364 LAVTPDGLRCQSRNQKDWHGCRATKGVHTKGAYYFEATVTDEGLCRVGWSTQAAKLDLGT 543
L + GL C+S +K W G R T G++ G YY+E T+T +GLCRVGW+T L++G
Sbjct: 20 LEIDETGLACKSEVKKRWLGARGTAGLYGNGKYYYEVTITSKGLCRVGWATLGGSLNIGK 79
Query: 544 DRLGYGFGGTGKKSNCKQFDDYGEAYGMNDVIGCFLNLNSGEIRYSKNGEDLGVAFSLDS 723
+G+GGTG KS K+FDDYG + +NDVIGC+L+L+S I +SKNGE AFS+D
Sbjct: 80 GLDSFGYGGTGMKSTHKKFDDYGLPFTLNDVIGCYLDLDSRTIWWSKNGEQFPAAFSIDV 139
Query: 724 SXKSD--CYFPAVVLKNAXMSFNFGA 795
K+ C FPAV+ +N+ +S NFG+
Sbjct: 140 KYKNSNTCLFPAVLCQNSSLSVNFGS 165
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 478 VTDEGLCRVGWS-TQAAKLDLGTDRLGYGFGGTGKKSNCKQFDDYGEAYGMNDVIGCFLN 654
+ D G R+G+S A L LG + +GK++ F D+G+ + + DV+ C +
Sbjct: 271 MADGGDVRIGFSLASTASLILGESPGSWCISASGKRAANNHFSDFGKLFDIGDVVTCIFD 330
Query: 655 LNSGEIRYSKNGEDLGVAFSLDSSXKSDCYFPAVVLKNAXMSFNFG 792
L+ G I Y NGE++G F + D FP + KNA ++ N G
Sbjct: 331 LSVGTISYQINGENVGSPFESLQFREGDVIFPTICTKNANINVNMG 376
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 63.3 bits (147), Expect = 2e-10
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Frame = +1
Query: 385 LRCQSRNQKDWHGCRATKGVHTKGAYYFEATVTDEGLCRVGWST--QAAKLDLGTDRLGY 558
LR + N + + AT V G +YFE + G ++GW ++ LG D Y
Sbjct: 949 LRARKDNTRTYRA-EATYAV-CGGKWYFEFEILTAGYMKIGWMDIGSTPEIQLGADDRSY 1006
Query: 559 GFGG-TGKKSNCKQFDDYGEAYGMNDVIGCFLNLNSGEIRYSKNGEDL----GVAFSLDS 723
F G G+K + + + YG+ + + DV+GCFL+LN I +S NGE L G + D+
Sbjct: 1007 AFDGYLGRKWH-QGAETYGKEWKIGDVVGCFLDLNDRTISFSLNGELLLDPSGSEMAFDN 1065
Query: 724 SXKSDCYFPAVVLKNAXMS-FNFG 792
D PA+ L + NFG
Sbjct: 1066 VVCGDGLVPAMTLGSGQRGRLNFG 1089
Score = 35.5 bits (78), Expect = 0.044
Identities = 26/85 (30%), Positives = 37/85 (43%)
Frame = +1
Query: 535 LGTDRLGYGFGGTGKKSNCKQFDDYGEAYGMNDVIGCFLNLNSGEIRYSKNGEDLGVAFS 714
+G D YGF G K + DVIGC ++L EI++S NG + +F
Sbjct: 594 VGDDFYSYGFDGKSMYFGGKSRRVGHKLLEKGDVIGCSIDLTIPEIKFSVNGTYMSGSF- 652
Query: 715 LDSSXKSDCYFPAVVLKNAXMSFNF 789
D YF V+ +A +S F
Sbjct: 653 --KKFNIDGYFFPVMSLSAKVSCRF 675
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 63.3 bits (147), Expect = 2e-10
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Frame = +1
Query: 385 LRCQSRNQKDWHGCRATKGVHTKGAYYFEATVTDEGLCRVGWST--QAAKLDLGTDRLGY 558
LR + N + + AT V G +YFE + G ++GW ++ LG D Y
Sbjct: 1070 LRARKDNTRTYRA-EATYAV-CGGKWYFEFEILTAGYMKIGWMDIGSTPEIQLGADDRSY 1127
Query: 559 GFGG-TGKKSNCKQFDDYGEAYGMNDVIGCFLNLNSGEIRYSKNGEDL----GVAFSLDS 723
F G G+K + + + YG+ + + DV+GCFL+LN I +S NGE L G + D+
Sbjct: 1128 AFDGYLGRKWH-QGAETYGKEWKIGDVVGCFLDLNDRTISFSLNGELLLDPSGSEMAFDN 1186
Query: 724 SXKSDCYFPAVVLKNAXMS-FNFG 792
D PA+ L + NFG
Sbjct: 1187 VVCGDGLVPAMTLGSGQRGRLNFG 1210
Score = 35.5 bits (78), Expect = 0.044
Identities = 26/85 (30%), Positives = 37/85 (43%)
Frame = +1
Query: 535 LGTDRLGYGFGGTGKKSNCKQFDDYGEAYGMNDVIGCFLNLNSGEIRYSKNGEDLGVAFS 714
+G D YGF G K + DVIGC ++L EI++S NG + +F
Sbjct: 715 VGDDFYSYGFDGKSMYFGGKSRRVGHKLLEKGDVIGCSIDLTIPEIKFSVNGTYMSGSF- 773
Query: 715 LDSSXKSDCYFPAVVLKNAXMSFNF 789
D YF V+ +A +S F
Sbjct: 774 --KKFNIDGYFFPVMSLSAKVSCRF 796
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 62.1 bits (144), Expect = 4e-10
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +1
Query: 70 KMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 249
K +F E GV + A + + W P+ +Q A+P L G DV+ AETGSGKTGAF +P
Sbjct: 42 KEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIP 101
Query: 250 ILQ 258
+LQ
Sbjct: 102 VLQ 104
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
+EE G E+ +A++E+ + PT +Q +AIP+ L DV+ AETGSGKT AF LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLL-- 360
Query: 262 VWET 273
VW T
Sbjct: 361 VWIT 364
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/81 (40%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +1
Query: 73 MTAFEEFGVLP-EIGKAIEEMDWTLPTDVQAEAIPL-ILGGGDVLMAAETGSGKTGAFCL 246
++A+++F LP E+ +AIE+M ++ PT++Q+ +P + DVL AAETGSGKT AF +
Sbjct: 153 ISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGI 212
Query: 247 PILQIVWETLKDMQEGKTGKV 309
P++ + E+ D QE ++ +V
Sbjct: 213 PLVARLLESSDDSQETESTEV 233
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/95 (32%), Positives = 52/95 (54%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
FE+F + + +++ D+T PT++Q + I L G DV+ AA+TGSGKT A +P+L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 262 VWETLKDMQEGKTGKVITQTSSECTMSFFDRTDAL 366
+W G G +I + E + F +A+
Sbjct: 138 LWRAKWSPDYG-LGALIISPTRELALQTFSTINAV 171
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +1
Query: 70 KMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 249
K FE+F + ++ I E W P+ +Q +I + L G D+L A+ G+GKTGA+C+P
Sbjct: 41 KGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIP 100
Query: 250 ILQIVWETLKDMQE---GKTGKVITQTSSEC 333
+++ + LK +Q T ++ QTS C
Sbjct: 101 VIEKIQPALKAIQAMVIVPTRELALQTSQIC 131
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +1
Query: 115 KAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWETLKDMQEG 294
KA++ + +T T++QA++I +L G DVL +A+TGSGKT AF LP ++++ L Q
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELL-HKLNWKQHN 139
Query: 295 KTGKVITQTSSECTMSFF 348
TG +I + E +M +
Sbjct: 140 GTGVIIVSPTRELSMQTY 157
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +1
Query: 70 KMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 249
K +++ G+ + KAIE+ + PT +Q + IP I+ G DV+ + TGSGKT AF +P
Sbjct: 22 KAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIP 81
Query: 250 ILQ 258
+LQ
Sbjct: 82 MLQ 84
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +1
Query: 70 KMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 249
K +++ G+ + KAIE+ + PT +Q + IP I+ G DV+ + TGSGKT AF +P
Sbjct: 22 KAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIP 81
Query: 250 ILQ 258
+LQ
Sbjct: 82 MLQ 84
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +1
Query: 94 GVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWET 273
GV ++ +++ +++ PT +QA+AIP I+ G DV+ A+TGSGKT AF LP+ + + +
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 274 LKDMQEGKTG-KVITQTSSECTMSFFDRTDALAVTPDGLR 390
+++EG VI + E M + + A P GL+
Sbjct: 370 -PELEEGDGPIAVILAPTRELAMQTYKEANKFA-KPLGLK 407
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
F E G P + + + ++ PT VQ +IP +L D++ A+TGSGKT AF LPI+Q
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 262 VWETLKDM 285
+ DM
Sbjct: 201 ILAGGPDM 208
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
F E G P + + + ++ PT VQ +IP +L D++ A+TGSGKT AF LPI+Q
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 262 VWETLKDM 285
+ DM
Sbjct: 185 ILAGGPDM 192
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
F E G P + + + ++ PT VQ +IP +L D++ A+TGSGKT AF LPI+Q
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 262 VWETLKDM 285
+ DM
Sbjct: 182 ILAGGPDM 189
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 258
F + GV I + ++ M T VQA IP IL G D+L A TG+GKT AF +PILQ
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQ 149
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 258
F + GV I + ++ M T VQA IP IL G D+L A TG+GKT AF +PILQ
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQ 149
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ- 258
F +FG+ I K+I E+ W VQ I L L +++ A TGSGKTGAF +P++Q
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 259 -IVWETLKDMQEGKTGKVITQTSSECTMSF 345
I D G + +I T T +
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIY 180
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 79 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL- 255
+F + + + + +E +T T +Q +PL+ G D+L A+TGSGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 256 QIVWETLKDMQEGKTG 303
+++ E KD+ G G
Sbjct: 359 RLILE--KDLNYGAEG 372
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 79 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL- 255
+F + + + + +E +T T +Q +PL+ G D+L A+TGSGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 256 QIVWETLKDMQEGKTG 303
+++ E KD+ G G
Sbjct: 359 RLILE--KDLNYGAEG 372
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 79 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 258
+FE+ + +I KA ++ PT +Q IP+ L G D+ A TG+GKT AF LPIL+
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 79 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP-IL 255
+F F + +AI + ++ PT +QA AIP L G DVL A+TGSGKT A+ P I+
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 256 QIVWETLKDMQEGKTGKVITQT 321
I+ + EG ++ T
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPT 347
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 49.2 bits (112), Expect = 3e-06
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Frame = +1
Query: 349 DRTDALAVTPDGLRCQSRNQKDWHGCRATKGVHTKGAYYFEATVTDEGLCRVGWSTQAAK 528
D ++ L + PDGL + + + R T V G +Y+EATV G+ ++G +T+ ++
Sbjct: 360 DVSEYLKIGPDGLEARC-DVSSFESVRCTFEV-MDGVWYYEATVLTSGVMQIGLATKRSR 417
Query: 529 LDLGTDRLGYGFGGTGKK---SNCKQFDDYG--------EAYGMNDVIGCFLNLNSGEIR 675
+ GYG G C+Q Y E + DVIG LN+ GE+
Sbjct: 418 F---LNHEGYGIGDDASSVAYDGCRQLVWYNAKSHKHEHENWQPGDVIGVLLNIPEGEVV 474
Query: 676 YSKNGEDL---GVAFSLDSSXKSDCYFPAVVLKNAXMSFNFGA 795
+ NG L F + + A + FNFGA
Sbjct: 475 FYLNGTPLKEPETEFLSNRQPSEGVFAAASFMSFQQCRFNFGA 517
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLIL--GGGDVLMAAETGSGKTGAFCL 246
+++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++G+GKT AF L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 247 PIL 255
+L
Sbjct: 268 TML 270
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLIL--GGGDVLMAAETGSGKTGAFCL 246
+++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++G+GKT AF L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 247 PIL 255
+L
Sbjct: 293 TML 295
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLIL--GGGDVLMAAETGSGKTGAFCL 246
+++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++G+GKT AF L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 247 PIL 255
+L
Sbjct: 677 TML 679
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +1
Query: 73 MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI 252
++ F + + I + I+ + PT VQ +IP + GG D++ A+TGSGKT AF +P+
Sbjct: 165 ISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPL 224
Query: 253 LQIV 264
+ +
Sbjct: 225 VNAI 228
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 255
F E + + K + ++ T +Q A+PL+ G D++ A+TGSGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 255
F E + + K + +T T +Q +PLI G D++ A+TGSGKT AF LPI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 255
F E + + K + +T T +Q +PLI G D++ A+TGSGKT AF LPI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 255
F E + + K + ++ T +Q A+PL+ G D++ A+TGSGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 73 MTAFEEFGVLPE-IGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 249
M +F+ F +LP+ + ++ M PT +Q + I+ G DV+ A TGSGKT AF +P
Sbjct: 734 MASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIP 793
Query: 250 -ILQIVWETLKD 282
+++++ E KD
Sbjct: 794 FVIKLMEEFEKD 805
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 73 MTAFEEFGVLPE-IGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 249
M +F+ F +LP+ + ++ M PT +Q + I+ G DV+ A TGSGKT AF +P
Sbjct: 734 MASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIP 793
Query: 250 -ILQIVWETLKD 282
+++++ E KD
Sbjct: 794 FVIKLMEEFEKD 805
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 255
F E + + K + ++ T +Q A+PL+ G D++ A+TGSGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 255
F E + + K + +T T +Q +PLI G D++ A+TGSGKT AF LPI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +1
Query: 70 KMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 249
++T++ G+ P I + ++ + + +Q IP +L G DVL AET +GKT AF LP
Sbjct: 379 RLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLP 438
Query: 250 IL 255
I+
Sbjct: 439 II 440
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
F++ G+ ++ + I + P+ +Q AIP IL DV+ A++G+GKT F + +LQ
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 262 VWETLKDMQ 288
+ +++ Q
Sbjct: 88 LDTQVRETQ 96
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
F++ G+ ++ + I + P+ +Q A+P IL DV+ A++G+GKT F + +LQ
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 262 VWETLKDMQ 288
+ +++ Q
Sbjct: 88 LDTQVRETQ 96
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +1
Query: 145 PTDVQAEAIPL-ILGGGDVLMAAETGSGKTGAFCLPILQIVWETLKDMQEGKTGKV 309
PT++Q+ +P + DVL AAETGSGKT AF +P++ + E+ D QE ++ +V
Sbjct: 11 PTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEV 66
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 73 MTAFEE-FGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 249
+ +FE+ FG I I + + P+ +Q++ PL+L G D + ++TGSGKT AF LP
Sbjct: 82 VNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLP 141
Query: 250 IL 255
L
Sbjct: 142 AL 143
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 145 PTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWETLKDM----QEGKTGKVI 312
PT +Q + IP+ L G D++ A TGSGKT F LP++ E + EG G +I
Sbjct: 213 PTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLII 272
Query: 313 TQTSSECTMSFFD 351
S E FD
Sbjct: 273 V-PSRELARQIFD 284
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
F + + P + + E P+ +Q ++IP + +VL +A TGSGKT AF LP++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 262 VWE 270
+ E
Sbjct: 188 ILE 190
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 145 PTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP-ILQIVWETLKDMQEGKTGKVITQT 321
PT +Q+ + P+ + G D++ A+TGSGKT AF LP ++ I + + EG V+ T
Sbjct: 152 PTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPT 211
>AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical
protein Y54E5A.7 protein.
Length = 622
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Frame = +1
Query: 454 GAYYFEATVTD--EGLCRVGWSTQAAKLDL--GTDRLGYGF-GGTGKKSNCKQFDD-YGE 615
G YYFE + + G +G S + L+ G D +G+ G G YG
Sbjct: 94 GVYYFEVRILEGHSGCMGIGLSKKDCDLNRMPGWDPGCFGYHGDDGNFFLASGVGQAYGP 153
Query: 616 AYGMNDVIGCFLNLNSGEIRYSKNGEDLGVAFSLDSSXKSDCYFPAVVLK--NAXMSFNF 789
+G DVIGC ++ + ++KNG+ LG+A + ++ K +P V K + NF
Sbjct: 154 KFGPGDVIGCGIDTFYHYVFFTKNGKHLGIAHTSPTALKE--LYPTVGFKTRGEKLVANF 211
Query: 790 G 792
G
Sbjct: 212 G 212
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 79 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 258
+F++ + E+ + I + P+ +Q AI G DV+ A++G+GKT F + ILQ
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 79 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 258
+F++ + E+ + I + P+ +Q AI G DV+ A++G+GKT F + ILQ
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 37.5 bits (83), Expect = 0.011
Identities = 30/103 (29%), Positives = 50/103 (48%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
FE + + + ++ + P+ VQA AIP+ L G D+L+ A++G+GKT F + +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSV----L 79
Query: 262 VWETLKDMQEGKTGKVITQTSSECTMSFFDRTDALAVTPDGLR 390
E L D + KVI + E ++ + V P G R
Sbjct: 80 AVENL-DSRSSHIQKVIVTPTREISVQI--KETVRKVAPTGAR 119
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 37.5 bits (83), Expect = 0.011
Identities = 30/103 (29%), Positives = 50/103 (48%)
Frame = +1
Query: 82 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 261
FE + + + ++ + P+ VQA AIP+ L G D+L+ A++G+GKT F + +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSV----L 79
Query: 262 VWETLKDMQEGKTGKVITQTSSECTMSFFDRTDALAVTPDGLR 390
E L D + KVI + E ++ + V P G R
Sbjct: 80 AVENL-DSRSSHIQKVIVTPTREISVQI--KETVRKVAPTGAR 119
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 148 TDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWETLKDMQEGKTGKVITQTSS 327
TDVQ + +L DV++ + TGSGKT AF LP+++++ +Q G +I S
Sbjct: 33 TDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNA--KLQPADIGALILSPSR 90
Query: 328 E 330
E
Sbjct: 91 E 91
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 31.1 bits (67), Expect = 0.95
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 514 TQAAKLDLGTDRLGYGFGGTGKKSNCKQFDDYGEAYGMNDVIGC 645
T LD DRLGY G + + FD + EA G + +I C
Sbjct: 74 TMIEMLDRLGDRLGYDIDGRDSLDDDELFDTFKEASGFSPIIYC 117
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 193 DVLMAAETGSGKTGAFCLPILQIV 264
DV +AA TGSGKT + LP+L V
Sbjct: 158 DVAIAAPTGSGKTICYVLPVLAAV 181
>Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical
protein ZK909.2c protein.
Length = 548
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -2
Query: 389 RNPSGVTASASVRSKNDIVHSEDVCVITLPVFPSCISFKVSQTICNIGKQNAPVFPL--- 219
RN + + V+ + ED+C +P S V + + G Q AP L
Sbjct: 105 RNTTSSITTGLVKKRRSSSSPEDICREKIPHILLKTSSGVVVPLASRG-QRAPAITLQNP 163
Query: 218 PVSAAISTSPPP 183
P SAAI T PPP
Sbjct: 164 PPSAAIRTVPPP 175
>AL009246-3|CAA15837.1| 248|Caenorhabditis elegans Hypothetical
protein C47F8.4 protein.
Length = 248
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 320 RLLSVLCHFSIALTHWLLLLTGYGVNPEIKK 412
RL + L H + HWL++ GYG+ PE+++
Sbjct: 20 RLANTLAH--VENLHWLVVEDGYGIVPEVRQ 48
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -2
Query: 254 NIGKQNAPVFPLPVSAAISTSPPPKIRGIASAWTSVGRVQSISSIALPISGSTPNSSKAV 75
N + N P P P A+ P P AS ++ S S P S S+ S K
Sbjct: 65 NNDENNKPFDPPPTFVAVKKKPTPLATSSASTTAPAAKIASASDSKKPASSSSTISVKPT 124
Query: 74 I 72
+
Sbjct: 125 V 125
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -2
Query: 254 NIGKQNAPVFPLPVSAAISTSPPPKIRGIASAWTSVGRVQSISSIALPISGSTPNSSKAV 75
N + N P P P A+ P P AS ++ S S P S S+ S K
Sbjct: 93 NNDENNKPFDPPPTFVAVKKKPTPLATSSASTTAPAAKIASASDSKKPASSSSTISVKPT 152
Query: 74 I 72
+
Sbjct: 153 V 153
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 577 KKSNCKQFDDYGEAYGMNDVI 639
KK NCK DY + Y +NDV+
Sbjct: 505 KKMNCKNIGDYTDIYMLNDVL 525
>U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore complex
protein protein12 protein.
Length = 1847
Score = 29.5 bits (63), Expect = 2.9
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = -2
Query: 398 D*HRNPSGVTASASVRSKNDIVHSEDVCVITLPVFPSCI-SFKVSQTI-CNIGKQNAPVF 225
D H +G SA++ +N V+S D + +PV S + S V TI +N+P+
Sbjct: 1250 DGHLITNGKEGSAAITVRN--VNSPDNETVLIPVTVSRVASLDVHPTIELKSAFENSPLI 1307
Query: 224 PLPVSAAISTSPPPK-IRG--IASAWTSV 147
LPV A I + P+ RG +A+A S+
Sbjct: 1308 HLPVGAQIQLNVVPRDARGRRLAAASNSI 1336
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 106 EIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 258
E+ + I + P+ +Q A+ G DV + ++ GSGKT + ILQ
Sbjct: 6 ELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQ 56
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 598 FDDYGEAYGMNDVIGCFLNLNSGEIRYSKNGEDLGVAF 711
F + + Y + D C L+++ G + ++ + E LGVAF
Sbjct: 223 FSNSRDVYNVPDKFYCILDMDEGYMAFATDDEFLGVAF 260
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 454 LSYEHLWLPYTRASLFDFWI 395
LSY L+L YT SLF FWI
Sbjct: 232 LSYIALFLLYTPVSLFGFWI 251
>AL021497-17|CAD56613.1| 138|Caenorhabditis elegans Hypothetical
protein Y51A2D.20 protein.
Length = 138
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -2
Query: 233 PVFPLPVSAAISTSPPPKIRGIASAWTSVGRVQSISSIALPISGSTPNSS 84
P+ P+++++ + PPP + A +++ SS PI+ STPNSS
Sbjct: 30 PIRNSPMTSSLRSRPPPPPYNRSPAH----KIEQNSSFFEPIAHSTPNSS 75
>AF016436-2|AAC25898.1| 406|Caenorhabditis elegans Hypothetical
protein F38H12.3 protein.
Length = 406
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +1
Query: 613 EAYGMN--DVIGCFLNLNSGEIRYSKNGEDLGVAFSL 717
EAYG++ D IGCF NSG+ D+ L
Sbjct: 169 EAYGIHHIDTIGCFQMKNSGKYHKRARASDINFVLKL 205
>Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical
protein F54G8.3 protein.
Length = 1139
Score = 23.4 bits (48), Expect(2) = 9.1
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +1
Query: 661 SGEIRYSKNGEDLGVAFSLDSSXKSDCYFPAVVLKNAXMSFNFG 792
SG RY ++G + + F DSS K ++ M FG
Sbjct: 279 SGATRYGEHGAVIFLPFIQDSSSKLTLNEDKFIINGTAMGSAFG 322
Score = 22.6 bits (46), Expect(2) = 9.1
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 490 GLCRVGWSTQAAKLDLGTDRLG---YGFGGTGKKSNCKQFDDYGEAYGMNDVIG 642
G C G+S + + T +G + G KKS+ FD E Y MN G
Sbjct: 190 GGCMEGFSAAITQDTIVTGLIGAVKWTGGVFAKKSSANIFDSVVEKYTMNQPNG 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,643,943
Number of Sequences: 27780
Number of extensions: 413594
Number of successful extensions: 1270
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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