Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_E20
(697 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 37 7e-04
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 34 0.005
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 32 0.015
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 31 0.035
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.080
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 28 0.24
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 27 0.75
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.7
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 3.0
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 24 4.0
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 7.0
AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA methy... 23 9.2
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 36.7 bits (81), Expect = 7e-04
Identities = 27/148 (18%), Positives = 68/148 (45%)
Frame = +2
Query: 128 AKXANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 307
AK +L+A+ A+ + + ++++++ E +L ++++ + ++ E+ + + E+ L
Sbjct: 769 AKVKDLQAKIADGKGHR-ERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEEL 827
Query: 308 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQL 487
+ I A +L E S DE A L+ + +E+M++ +L
Sbjct: 828 QKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKEL 887
Query: 488 KEARFLAEEADKKYDEVARKLAMVEADL 571
K ++ K+ DE+ ++ E ++
Sbjct: 888 KAKYHQRDKLLKQNDELKLEIKKKENEI 915
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 33.9 bits (74), Expect = 0.005
Identities = 22/101 (21%), Positives = 45/101 (44%)
Frame = +2
Query: 176 QLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXX 355
+LQK I+ + +LDQ + ++ Q + K+ A+ E+E+A + I
Sbjct: 797 KLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEAEIARIQASIDKEQQARHDLQT 856
Query: 356 XXATATAKLSEASQAADESERARKVLENRSLADEERMDALE 478
L ++++ +E +R R L + ++ R +A E
Sbjct: 857 NHKVKQQALKRSTESMEERKRTRVALS--AALEQARQEASE 895
Score = 25.0 bits (52), Expect = 2.3
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 122 QQAKXANLRAEKAEEEAR--QLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESE 295
+Q K A + EKA+ + R +L I + + E+D ++ V EEK +SE
Sbjct: 438 EQRKQA-VETEKAQLKERNDELASMIASAQREVDLMYNTMAHVKDAREEKHHERCAKQSE 496
Query: 296 VAALNRRIQ 322
+ ++++
Sbjct: 497 TTRIEKQLE 505
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 32.3 bits (70), Expect = 0.015
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
Frame = +2
Query: 149 AEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVA----ALNRR 316
AE+A + A ++K+ +N Q+NG+L + + L+ E+++ N
Sbjct: 1448 AEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEEREAQIRKDLNLTNEA 1507
Query: 317 IQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLAD-EERMDALENQLKE 493
+ + + E S E R++ N SL D E R+ A E +L++
Sbjct: 1508 KEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVN-SLDDLERRLSAAEKELED 1566
Query: 494 AR 499
A+
Sbjct: 1567 AQ 1568
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 31.1 bits (67), Expect = 0.035
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Frame = +2
Query: 152 EKAEEEARQLQKKIQTIENELDQTQESLMQVNG---KLEEKEKALQNAESEVAALNRRIQ 322
++ +E +L+++ + ++ +L + Q++ M+V K +E L N + E R +
Sbjct: 643 KELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEKVKFERSCR 702
Query: 323 XXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARF 502
A + + AS+ D E+ ++ E R+ E LE+ + A+
Sbjct: 703 TIIEQLLDQQRRKVAALERYAAASREHDLLEQRIRLFEERNNDREANFRLLEDAYQSAK- 761
Query: 503 LAEEADKKYDEVARKLAMVEA 565
K V +KLA V+A
Sbjct: 762 ------KTLANVEKKLAEVKA 776
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 29.9 bits (64), Expect = 0.080
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 167 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 310
E ++K+Q NE + ++L V GKL+E A+Q+ S+ L+
Sbjct: 542 ELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
Score = 29.1 bits (62), Expect = 0.14
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Frame = +2
Query: 161 EEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNA-------ESEVAALNRRI 319
E+E Q I+ +E Q +E ++ +LEE + A++ A + E+ AL +R
Sbjct: 941 EDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKRE 1000
Query: 320 QXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKE 493
T KL E + K L+ + +E + L+ +E
Sbjct: 1001 AEGKMKRLEFEQILQTIETKLQETKDTLPHWQLQLKPLKLHEIPEEPPQEPLKEYTEE 1058
Score = 27.1 bits (57), Expect = 0.56
Identities = 26/183 (14%), Positives = 78/183 (42%), Gaps = 1/183 (0%)
Frame = +2
Query: 146 RAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQX 325
+ ++ E E +++ + ++ ++ + +E QV+ + E + + E +V AL ++
Sbjct: 806 KLKQQEMELKRMHMDVASLTQQMPRLKE---QVDWQAERVARTHSDPE-KVRALEAKVAE 861
Query: 326 XXXXXXXXXXXXATATAKLSEASQAADESERAR-KVLENRSLADEERMDALENQLKEARF 502
+ ++ +E ++ KVL+ + +++D L + +
Sbjct: 862 CKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQTKINGLGKQIDKLSANISKLTV 921
Query: 503 LAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSXEK 682
+ +++ + K+ +E ++ + +LEEE + L+ ++++ EK
Sbjct: 922 EIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEK 981
Query: 683 ANQ 691
A++
Sbjct: 982 AHE 984
Score = 24.2 bits (50), Expect = 4.0
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 380 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 559
L E + E E R +E DAL+ + E L +E K+YDE+
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374
Query: 560 EADL 571
E+ L
Sbjct: 375 ESTL 378
Score = 24.2 bits (50), Expect = 4.0
Identities = 20/101 (19%), Positives = 39/101 (38%)
Frame = +2
Query: 203 ENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKL 382
E+EL Q + KLE + + E ++ R+Q TA KL
Sbjct: 491 ESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKL 550
Query: 383 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFL 505
E + E + + ++ + +E M A+++ + + L
Sbjct: 551 QENANEERELTQTLRAVQGKL---QESMAAMQSTRSQGKVL 588
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 28.3 bits (60), Expect = 0.24
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 683 PSPXRLPEISGCYQRHGAPPQAQRFWIRQTRHA 585
P P + E + C+QR+ A P+A R IR+ A
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERA 874
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.6 bits (56), Expect = 0.75
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +2
Query: 407 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 538
+ E + E + ADEE D E ++L+EAR +AEE +++ E+
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 1.7
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +1
Query: 160 RRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGSAER*VRSGCPEPTYPTAGGGP 339
R+R + EED D +R S +G R R G GS R+G AG G
Sbjct: 1047 RKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS-----RAG------SRAGSGS 1095
Query: 340 REIRGASRDRHR 375
R R SR R R
Sbjct: 1096 RS-RSRSRSRSR 1106
Score = 25.0 bits (52), Expect = 2.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 122 QQAKXANLRAEKAEEEARQLQKKIQTIENE 211
QQA+ RA K +EE R L++K Q +E E
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQK-QELERE 849
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 3.0
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -3
Query: 515 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 426
PP R W P GRP P H PTT + AP
Sbjct: 90 PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.2 bits (50), Expect = 4.0
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 452 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPR 348
PP S PY+ IHR P R + + PR
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPR 264
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 383 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKY 529
SE+S ++DES+ ++ S + EER E+ ++ ++ +E KY
Sbjct: 1926 SESSSSSDESD------DSNSSSSEERKPNREHFFEKQQYTEKECPVKY 1968
>AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA
methylase protein.
Length = 459
Score = 23.0 bits (47), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 71 PADDD*ERPFW 39
PAD + ERPFW
Sbjct: 38 PADHNPERPFW 48
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,643
Number of Sequences: 2352
Number of extensions: 10783
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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