Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E16
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.9  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   5.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +2

Query: 428 TKKDQSRNREATQKGQTRCQKRTQTAPTW 514
           TKK+  + ++  ++  T  ++  +T P W
Sbjct: 258 TKKEDKKKKKTIKEKYTEDEELNKTKPIW 286


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +3

Query: 9   RCFCNCCXSVCKFGFISPFXLLISCINQFFVKIRSF 116
           RC    C        +  F ++I C+ QF   + SF
Sbjct: 237 RCHDQLCDMCGAINMLFGFPIIIGCLIQFNTIVFSF 272


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 132 FYLNFCANXQITHAQNAHRPKISQRH 209
           + LN C N  I  A N   P++  RH
Sbjct: 308 YSLNSCVNPWIYLAFNRELPRLLLRH 333


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 267 NYCTNHDYSLKSYNVRLSQYGAGRFL 190
           NY   H + L ++N ++S     RFL
Sbjct: 410 NYEIRHKFKLWNFNNQISDDNPARFL 435


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 588 DKRGFIKLVYQNIFMAMQSMIRAMDLLTIQY 680
           DK GF  L   + +     ++RA D+L + Y
Sbjct: 85  DKHGFTILNSMHKYQPRFHLVRANDILKLPY 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,752
Number of Sequences: 336
Number of extensions: 3506
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)