Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E14
         (551 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890...   122   3e-28
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631...   122   3e-28
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615...   115   2e-26
03_03_0016 - 13761007-13761489,13761929-13762096,13763086-137631...    27   10.0 

>07_03_1580 +
           27888275-27888360,27888755-27888871,27888964-27889045,
           27889710-27889821,27889958-27890071,27890163-27890326
          Length = 224

 Score =  122 bits (293), Expect = 3e-28
 Identities = 77/189 (40%), Positives = 97/189 (51%), Gaps = 7/189 (3%)
 Frame = +2

Query: 2   VQVFXQVGKAPAANLPHVLRWYNQIASYTSAERKTWSQGTS----PLXXXXXXXXXXXXX 169
           ++VF  V   P A  P+  RWY+ +A+  ++     + G +                   
Sbjct: 37  IKVFAAVPSKPGAEFPNAARWYDTVAAALASRFPGKAVGVNLPGGGAASSAAAAAPAAKD 96

Query: 170 XXXXXXXVDLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDET 349
                  +DLFG                  +  A K S K     KSS+LLDVKPWDDET
Sbjct: 97  ADEDDDDLDLFGDETEEDKKAAD-------ERAASKASSKKKESGKSSVLLDVKPWDDET 149

Query: 350 DMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVD-LLTEKIQE--F 520
           DMK++E  VR+++MEGL WGASKLVPVGYGI KLQIM  I DD VSVD L+ E + E   
Sbjct: 150 DMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPI 209

Query: 521 EXFVQSVDI 547
             FVQS DI
Sbjct: 210 NEFVQSCDI 218


>03_04_0016 +
           16461542-16461566,16462701-16462732,16463015-16463100,
           16463189-16463305,16463399-16463474,16463695-16463818,
           16464482-16464595,16464700-16464947
          Length = 273

 Score =  122 bits (293), Expect = 3e-28
 Identities = 80/188 (42%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
 Frame = +2

Query: 8   VFXQVGKAPAANLPHVLRWYNQIA-----SYTSAERKTWSQGTSPLXXXXXXXXXXXXXX 172
           VF  +  APAA+  +V RWY+ I+     S  +AE +     ++                
Sbjct: 58  VFTSLPSAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAAD 117

Query: 173 XXXXXXVDLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETD 352
                 VDLFG                  +A A K S K     KSS+LLDVKPWDDETD
Sbjct: 118 EEDDDDVDLFGEETEEEKKAAEE------RAAAVKASGKKKESGKSSVLLDVKPWDDETD 171

Query: 353 MKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEK---IQEFE 523
           M ++E  VR ++MEGLLWGASKLVPVGYGI KLQIM  I DD VSVD L E     +   
Sbjct: 172 MAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPAN 231

Query: 524 XFVQSVDI 547
            F+QS DI
Sbjct: 232 EFIQSCDI 239


>07_03_1260 -
           25260872-25261101,25261199-25261312,25261473-25261596,
           25261755-25261839,25261917-25262033,25262122-25262207
          Length = 251

 Score =  115 bits (277), Expect = 2e-26
 Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
 Frame = +2

Query: 260 KAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYG 439
           +A A K S K     KSS+LLDVKPWDDETDM ++E  VR ++MEGLLWGASKLVPVGYG
Sbjct: 125 RAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYG 184

Query: 440 INKLQIMCVIEDDKVSVDLLTEK---IQEFEXFVQSVDI 547
           I KLQIM  I DD VSVD L E     +    ++QS DI
Sbjct: 185 IKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDI 223


>03_03_0016 -
           13761007-13761489,13761929-13762096,13763086-13763130,
           13763380-13763447,13763532-13763586,13763659-13763814,
           13763904-13764002,13764792-13764872,13765513-13765636,
           13765938-13766032,13766434-13766560,13766768-13766871,
           13767278-13767359,13768012-13768049
          Length = 574

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
 Frame = +2

Query: 335 WDDETDMKEMENQVRT---IEMEGLLWGAS--KLVPVGYGINKLQIMCVIEDDKVS--VD 493
           W++  D+K + N +RT   I   G LWG S   +  + YG     I  ++ D   S  VD
Sbjct: 115 WNEREDLKAVVNHLRTDGNISCIG-LWGRSMGAVTSLMYGAEDPSIAGMVLDSPFSNLVD 173

Query: 494 LLTEKIQEFE 523
           L+ E +  ++
Sbjct: 174 LMMELVDTYK 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,893,142
Number of Sequences: 37544
Number of extensions: 282057
Number of successful extensions: 715
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)