Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E14
         (551 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   171   2e-43
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   138   2e-33
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    30   1.3  
Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical p...    27   6.8  
Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AL132876-15|CAD21668.2|  722|Caenorhabditis elegans Hypothetical...    27   9.0  
AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical ...    27   9.0  
AB096636-1|BAC76736.1|  722|Caenorhabditis elegans tyrosyl-tRNA ...    27   9.0  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  171 bits (417), Expect = 2e-43
 Identities = 96/185 (51%), Positives = 117/185 (63%), Gaps = 4/185 (2%)
 Frame = +2

Query: 5   QVFXQVGKAP-AANLPHVLRWYNQIASYTSAERKTWSQ--GTSPLXXXXXXXXXXXXXXX 175
           Q+F  +G AP A+  P+V RWY  +ASYT AERKTW+   G++P                
Sbjct: 35  QLFAALGSAPNASTYPNVARWYANVASYTDAERKTWASAGGSAPAAAAADGDDF------ 88

Query: 176 XXXXXVDLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDM 355
                 DLFGS                L AYA+KK+KK   IAKSS++LDVKPWDDETD+
Sbjct: 89  ------DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDL 142

Query: 356 KEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEXFV 532
            EME  VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI  +FE  V
Sbjct: 143 GEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHV 202

Query: 533 QSVDI 547
           QSVDI
Sbjct: 203 QSVDI 207


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  138 bits (335), Expect = 2e-33
 Identities = 72/119 (60%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = +2

Query: 194 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 373
           DLFGS                L AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 374 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEXFVQSVDI 547
           VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI  +FE  VQSVDI
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDI 257


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 311 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSV 490
           SI+L VKP DDE  ++++ NQ     M G LW A++     Y   ++     I    V V
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSYVCVRVLKFLYIMCKSVLV 489

Query: 491 DLLTEK 508
             +T K
Sbjct: 490 HFITPK 495


>Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 412 LQTCACWVWHK*TANYVCH 468
           LQ CA W+WHK   NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204


>Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 412 LQTCACWVWHK*TANYVCH 468
           LQ CA W+WHK   NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204


>Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical
           protein T09E8.4 protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = -2

Query: 361 FLHIGFIIPWLDIKENRGLGNESWFLRLLV-SICFQTFFSNSFSFCILFLVTRTK*INVV 185
           FL+I  I     +K++    NE   +R+LV +I    FF  S S   +FL+ +T   N  
Sbjct: 291 FLYIAVIFKIFAMKKSTLNKNE---IRVLVQAIVIFVFFQASSS---VFLICQTIAFNTA 344

Query: 184 VIVVFRCWGGSRGFSTGGQWAGALRPCFAFSRS 86
              V +     R  +T   +AGA  PCF+F  S
Sbjct: 345 TAFVIK-----RIINTLEIFAGAATPCFSFFTS 372


>Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical
           protein D1046.4 protein.
          Length = 583

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/61 (22%), Positives = 31/61 (50%)
 Frame = -2

Query: 394 FHFNSAYLVFHFLHIGFIIPWLDIKENRGLGNESWFLRLLVSICFQTFFSNSFSFCILFL 215
           FHF+   +++  +     + W  + ++  + +  ++L ++V I    F+  SF+  IL L
Sbjct: 391 FHFDIQLILYAAIFAFLSLTWPSVFKSSNIISNKYYLPVMVRIHVVLFYFGSFASNILPL 450

Query: 214 V 212
           V
Sbjct: 451 V 451


>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
           protein C28A5.2 protein.
          Length = 1218

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 478 VVLDDTHNLQFIYAIPNRHKFGGSPEKAFHFNSAYLVFHF 359
           VV DD +       +P    F   P K+F    AY VFHF
Sbjct: 832 VVYDDMNVKNTSVVVPIGGNFNNLP-KSFQLGDAYKVFHF 870


>AL132876-15|CAD21668.2|  722|Caenorhabditis elegans Hypothetical
           protein Y105E8A.19 protein.
          Length = 722

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = -2

Query: 409 SPEKAFHFNSAYLVFHFLHIGFIIPWLDIKENRGLGNESWFLRLLVS 269
           SP+K  H           H+GFI P L IKE    G       +LVS
Sbjct: 399 SPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISDAGGVPVIATILVS 445


>AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical
           protein W07E6.2 protein.
          Length = 473

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 386 EMEGLLWGASKLVPVGYGINKLQIMC 463
           E E  L G+  LVPV    N+LQI+C
Sbjct: 14  EDENELGGSGILVPVDISTNELQILC 39


>AB096636-1|BAC76736.1|  722|Caenorhabditis elegans tyrosyl-tRNA
           synthetase (cytoplasmic)protein.
          Length = 722

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = -2

Query: 409 SPEKAFHFNSAYLVFHFLHIGFIIPWLDIKENRGLGNESWFLRLLVS 269
           SP+K  H           H+GFI P L IKE    G       +LVS
Sbjct: 399 SPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISDAGGVPVIATILVS 445


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,471,283
Number of Sequences: 27780
Number of extensions: 231068
Number of successful extensions: 674
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)