Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E12
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   3.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   5.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.2  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   6.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.8  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 467 GMYPVSITQLKP*VDFCMNLVY 402
           G     IT L+P + +C +L+Y
Sbjct: 39  GQAKFEITDLEPALQYCTHLIY 60


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +1

Query: 256 HWKPSIQIVL*SSPLLHLNLMGMKNSQDSYQYRNWIYHTV 375
           +W  S      ++P L  +    +N++ +Y + N +YH+V
Sbjct: 10  YWTNSFYQNYKTNPFLASDCDKNQNTEHNYTHNNEMYHSV 49


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +1

Query: 256 HWKPSIQIVL*SSPLLHLNLMGMKNSQDSYQYRNWIYHTV 375
           +W  S      ++P L  +    +N++ +Y + N +YH V
Sbjct: 10  YWTNSFYQNYKTNPFLASDCDKNQNTEQNYTHNNEMYHRV 49


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +1

Query: 256 HWKPSIQIVL*SSPLLHLNLMGMKNSQDSYQYRNWIYHTV 375
           +W  S      ++P L  +    +N++ +Y + N +YH V
Sbjct: 10  YWTNSFYQNYKTNPFLASDCDKNQNTEQNYTHNNEMYHRV 49


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 525 LIIKSDCTRSQQLNLADCMRKLRN 596
           LII  DC RS+   +    +KLR+
Sbjct: 253 LIIMCDCVRSEASKVVKNAQKLRH 276


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 474 RQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKL 590
           R+++  L +K+  KE Y+     C  + QLNL +   K+
Sbjct: 80  REQLARL-EKEFFKENYVSRPRRCELAAQLNLPESTIKV 117


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 620 CDFSISDHIA*LPHAISQ--VELLRPSAV 540
           C++ I DH+    HAI Q  V  ++P  V
Sbjct: 304 CEYPIPDHMNTTNHAIVQSLVNSMKPKEV 332


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 475 LISGCIQSASLNLNLK 428
           ++SGC  S S N+N K
Sbjct: 344 IMSGCSTSTSTNINTK 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,565
Number of Sequences: 336
Number of extensions: 3470
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)