Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E11
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    55   6e-08
AF106575-11|AAC78166.1|  329|Caenorhabditis elegans Hypothetical...    30   2.1  
AF077542-5|AAC26299.1|  883|Caenorhabditis elegans Hypothetical ...    29   3.6  
AC006670-2|ABC71822.1|  901|Caenorhabditis elegans Patched relat...    28   8.4  

>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
 Frame = +2

Query: 425 ATICDYNNRTKCDLHVEPEITNIFATSSDAEELKYTWLEWHKAAGAPSKSNFTEYVQMEN 604
           +TICD +    C L  + ++ +IF    DA  L++ W+ +  A  A SK ++   + + N
Sbjct: 286 STICDKDVPPPCALQ-KIDMDSIFRNEKDASRLQHLWVSYVTAI-AKSKPSYNNIITISN 343

Query: 605 EAAKLNGYDTVAEWWLXEYEAT--------DSEDXFAXLWAQIKPLYEQIHAYVXGHL 754
           E AKLNG+      W   ++ +        D       +++ I+P Y+ +HAY+   L
Sbjct: 344 EGAKLNGFANGGAMWRSAFDMSSKVHKAEFDLNKQIDKIYSTIQPFYQLLHAYMRRQL 401


>AF106575-11|AAC78166.1|  329|Caenorhabditis elegans Hypothetical
           protein K04F1.7 protein.
          Length = 329

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 566 SKSNFTE-YVQMENEAAKLNGYDTVAEWWLXEYEATDSEDXFAXLWAQIKPLYEQIHAY 739
           S+ NF E ++  + +A+   G  TV    L +     S+D    L+  IK LY  +H Y
Sbjct: 44  SRCNFLEEHLNSKTKASFPTGCSTVCANLLIDDSTDISQDKMTLLFKNIKVLYGSLHVY 102


>AF077542-5|AAC26299.1|  883|Caenorhabditis elegans Hypothetical
           protein Y57G7A.6 protein.
          Length = 883

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/70 (25%), Positives = 26/70 (37%)
 Frame = +2

Query: 464 LHVEPEITNIFATSSDAEELKYTWLEWHKAAGAPSKSNFTEYVQMENEAAKLNGYDTVAE 643
           +H E +  +   T+   E   +    W K+      SN + Y QM  + A  N  D   E
Sbjct: 610 IHFESQFGDFEETTQQIEMFLFDVNSWEKSIAVKKNSNLSAYGQMFADLAIFNSIDLKFE 669

Query: 644 WWLXEYEATD 673
             L   E  D
Sbjct: 670 ERLAATEGFD 679


>AC006670-2|ABC71822.1|  901|Caenorhabditis elegans Patched related
           family protein12, isoform a protein.
          Length = 901

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
 Frame = +2

Query: 188 ETNLTVHNEQKLLQVSLEVASETKEYWKET---------MSYLWHEFEDPDLK--RMFKK 334
           ET  ++ N +    ++L++ SE KE W             +YL  EFE P+++   +   
Sbjct: 208 ETKKSITNIRSSKLIALQLRSERKEGWNSNGIKDFEMSITNYLEKEFESPEIRVLTLSTS 267

Query: 335 YTE-----LGTSALPEDLNQRLIVAINSMQSTYAKA 427
           Y E      G S LP  +   +I+AI S  +T+  A
Sbjct: 268 YVEAEVVRAGMSLLPFLIVGFVIMAIVSSVTTFFSA 303


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,536,798
Number of Sequences: 27780
Number of extensions: 382170
Number of successful extensions: 1230
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)