Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E11
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.44 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.44 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.44 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   7.2  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 284 YLWHEFEDPDLKRMFKKYTELGTSALPEDLNQRLIVAINSMQSTYAKATICDY 442
           Y   E E   L  +F K   +GT +    +N+RL    ++M +   K  +CDY
Sbjct: 178 YSARENELRALSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDY 230


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 284 YLWHEFEDPDLKRMFKKYTELGTSALPEDLNQRLIVAINSMQSTYAKATICDY 442
           Y   E E   L  +F K   +GT +    +N+RL    ++M +   K  +CDY
Sbjct: 178 YSARENELRALSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDY 230


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 284 YLWHEFEDPDLKRMFKKYTELGTSALPEDLNQRLIVAINSMQSTYAKATICDY 442
           Y   E E   L  +F K   +GT +    +N+RL    ++M +   K  +CDY
Sbjct: 178 YSARENELRALSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDY 230


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 166 DDCLLGL*DEF 198
           DDCLLG+ D++
Sbjct: 109 DDCLLGIVDDY 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,723
Number of Sequences: 438
Number of extensions: 4604
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)