Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_E09
(840 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated tra... 63 1e-18
AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated tr... 63 1e-18
AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated tr... 63 1e-18
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 63 1e-18
BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein. 63 1e-18
BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein. 63 1e-18
AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens ... 63 1e-18
AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated tr... 63 1e-18
BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein. 62 2e-18
D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein. 61 2e-17
CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein. 61 2e-17
BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated pr... 61 2e-17
BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated pr... 61 2e-17
AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein. 61 2e-17
BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated pr... 60 5e-17
AC079145-1|AAX88938.1| 196|Homo sapiens unknown protein. 61 4e-09
AY464186-1|AAS46603.1| 281|Homo sapiens complement inhibitory r... 54 5e-07
AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein. 41 0.005
AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated pro... 40 0.008
AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated pro... 40 0.008
AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein. 40 0.008
U51240-1|AAB08975.1| 262|Homo sapiens lysosomal-associated mult... 36 0.14
U30498-1|AAA74018.1| 262|Homo sapiens E3 protein protein. 36 0.14
D42042-1|BAA07643.1| 269|Homo sapiens KIAA0085 protein. 36 0.14
BC106897-1|AAI06898.1| 262|Homo sapiens lysosomal associated mu... 36 0.14
BC106896-1|AAI06897.1| 262|Homo sapiens lysosomal associated mu... 36 0.14
AL137857-1|CAI19321.1| 262|Homo sapiens lysosomal associated mu... 36 0.14
AL137027-1|CAI19267.1| 262|Homo sapiens lysosomal associated mu... 36 0.14
BC112064-1|AAI12065.1| 194|Homo sapiens methyl-CpG binding doma... 34 0.74
BC112058-1|AAI12059.1| 194|Homo sapiens methyl-CpG binding doma... 34 0.74
AY038022-1|AAK72591.1| 194|Homo sapiens methyl-CpG binding doma... 34 0.74
AL139100-5|CAI20353.1| 1440|Homo sapiens RP3-349A12.1 protein. 33 0.97
AL033520-3|CAI20282.1| 1440|Homo sapiens RP3-349A12.1 protein. 33 0.97
AB126777-1|BAD32740.1| 1440|Homo sapiens ICBP90 binding protein ... 33 0.97
>AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated
transmembrane protein 4 beta protein.
Length = 370
Score = 63.3 bits (147), Expect(2) = 1e-18
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + + YGA + + A+++PFFC QI
Sbjct: 194 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWIIPFFCYQI 253
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 254 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 313
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 314 GYLISCVWNCYRYINGRNSS 333
Score = 50.4 bits (115), Expect(2) = 1e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 159 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 194
>AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta, variant 1 protein.
Length = 317
Score = 63.3 bits (147), Expect(2) = 1e-18
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + + YGA + + A+++PFFC QI
Sbjct: 141 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWIIPFFCYQI 200
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 201 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 260
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 261 GYLISCVWNCYRYINGRNSS 280
Score = 50.4 bits (115), Expect(2) = 1e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
>AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta variant 2 protein.
Length = 317
Score = 63.3 bits (147), Expect(2) = 1e-18
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + + YGA + + A+++PFFC QI
Sbjct: 141 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWIIPFFCYQI 200
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 201 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 260
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 261 GYLISCVWNCYRYINGRNSS 280
Score = 50.4 bits (115), Expect(2) = 1e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 63.3 bits (147), Expect(2) = 1e-18
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + + YGA + + A+++PFFC QI
Sbjct: 107 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWIIPFFCYQI 166
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 167 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 226
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 227 GYLISCVWNCYRYINGRNSS 246
Score = 50.4 bits (115), Expect(2) = 1e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 72 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 107
>BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 63.3 bits (147), Expect(2) = 1e-18
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + + YGA + + A+++PFFC QI
Sbjct: 50 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWIIPFFCYQI 109
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 110 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 169
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 170 GYLISCVWNCYRYINGRNSS 189
Score = 50.4 bits (115), Expect(2) = 1e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
>BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 63.3 bits (147), Expect(2) = 1e-18
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + + YGA + + A+++PFFC QI
Sbjct: 50 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWIIPFFCYQI 109
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 110 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 169
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 170 GYLISCVWNCYRYINGRNSS 189
Score = 50.4 bits (115), Expect(2) = 1e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
>AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens
cDNA PSEC0001 fis, clone NT2RM1000066, moderately
similar to Lysosomal-associated transmembrane protein 4
beta. ).
Length = 226
Score = 63.3 bits (147), Expect(2) = 1e-18
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + + YGA + + A+++PFFC QI
Sbjct: 50 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWIIPFFCYQI 109
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 110 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 169
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 170 GYLISCVWNCYRYINGRNSS 189
Score = 50.4 bits (115), Expect(2) = 1e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
>AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated
transmembrane protein 4 beta protein.
Length = 226
Score = 63.3 bits (147), Expect(2) = 1e-18
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + + YGA + + A+++PFFC QI
Sbjct: 50 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWIIPFFCYQI 109
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 110 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 169
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 170 GYLISCVWNCYRYINGRNSS 189
Score = 50.4 bits (115), Expect(2) = 1e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
>BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein.
Length = 317
Score = 62.5 bits (145), Expect(2) = 2e-18
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 PSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMI--YGAARGKPAYLLPFFCLQI 574
P Y+ +S DA++ + + + + + YGA + + A+++PFFC QI
Sbjct: 141 PDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICATATYGAYKQRAAWIIPFFCYQI 200
Query: 575 FDFAITILTATGYLCYLRQIHALIAE-TRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXK 751
FDFA+ +L A L Y I I + P+ K
Sbjct: 201 FDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILLFISIILTFK 260
Query: 752 GYCIXVVWRCYKYLTMRTAA 811
GY I VW CY+Y+ R ++
Sbjct: 261 GYLISCVWNCYRYINGRNSS 280
Score = 50.4 bits (115), Expect(2) = 2e-18
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 292
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
>D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein.
Length = 254
Score = 61.3 bits (142), Expect(2) = 2e-17
Identities = 30/108 (27%), Positives = 48/108 (44%)
Frame = +2
Query: 479 VTVGTMALTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALIAETR 658
V+V ++ +++YGA + +L+PFFC ++FDF ++ L A L YL +I + +
Sbjct: 107 VSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLP 166
Query: 659 RVPFXXXXXXXXXXXXXXXXXXXXXXXXXXKGYCIXVVWRCYKYLTMR 802
P+ K Y I VW CYKY+ R
Sbjct: 167 DFPYKDDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNR 214
Score = 48.0 bits (109), Expect(2) = 2e-17
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +2
Query: 161 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 340
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 32 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 91
Query: 341 SNVGRTGD 364
+ R D
Sbjct: 92 YSSERMAD 99
>CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein.
Length = 233
Score = 61.3 bits (142), Expect(2) = 2e-17
Identities = 30/108 (27%), Positives = 48/108 (44%)
Frame = +2
Query: 479 VTVGTMALTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALIAETR 658
V+V ++ +++YGA + +L+PFFC ++FDF ++ L A L YL +I + +
Sbjct: 86 VSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLP 145
Query: 659 RVPFXXXXXXXXXXXXXXXXXXXXXXXXXXKGYCIXVVWRCYKYLTMR 802
P+ K Y I VW CYKY+ R
Sbjct: 146 DFPYKDDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNR 193
Score = 48.0 bits (109), Expect(2) = 2e-17
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +2
Query: 161 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 340
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 341 SNVGRTGD 364
+ R D
Sbjct: 71 YSSERMAD 78
>BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 61.3 bits (142), Expect(2) = 2e-17
Identities = 30/108 (27%), Positives = 48/108 (44%)
Frame = +2
Query: 479 VTVGTMALTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALIAETR 658
V+V ++ +++YGA + +L+PFFC ++FDF ++ L A L YL +I + +
Sbjct: 86 VSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLP 145
Query: 659 RVPFXXXXXXXXXXXXXXXXXXXXXXXXXXKGYCIXVVWRCYKYLTMR 802
P+ K Y I VW CYKY+ R
Sbjct: 146 DFPYKDDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNR 193
Score = 48.0 bits (109), Expect(2) = 2e-17
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +2
Query: 161 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 340
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 341 SNVGRTGD 364
+ R D
Sbjct: 71 YSSERMAD 78
>BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 61.3 bits (142), Expect(2) = 2e-17
Identities = 30/108 (27%), Positives = 48/108 (44%)
Frame = +2
Query: 479 VTVGTMALTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALIAETR 658
V+V ++ +++YGA + +L+PFFC ++FDF ++ L A L YL +I + +
Sbjct: 86 VSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLP 145
Query: 659 RVPFXXXXXXXXXXXXXXXXXXXXXXXXXXKGYCIXVVWRCYKYLTMR 802
P+ K Y I VW CYKY+ R
Sbjct: 146 DFPYKDDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNR 193
Score = 48.0 bits (109), Expect(2) = 2e-17
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +2
Query: 161 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 340
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 341 SNVGRTGD 364
+ R D
Sbjct: 71 YSSERMAD 78
>AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein.
Length = 215
Score = 61.3 bits (142), Expect(2) = 2e-17
Identities = 30/108 (27%), Positives = 48/108 (44%)
Frame = +2
Query: 479 VTVGTMALTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALIAETR 658
V+V ++ +++YGA + +L+PFFC ++FDF ++ L A L YL +I + +
Sbjct: 86 VSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLP 145
Query: 659 RVPFXXXXXXXXXXXXXXXXXXXXXXXXXXKGYCIXVVWRCYKYLTMR 802
P+ K Y I VW CYKY+ R
Sbjct: 146 DFPYKDDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNR 193
Score = 48.0 bits (109), Expect(2) = 2e-17
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +2
Query: 161 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 340
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 341 SNVGRTGD 364
+ R D
Sbjct: 71 YSSERMAD 78
>BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 60.1 bits (139), Expect(2) = 5e-17
Identities = 29/108 (26%), Positives = 48/108 (44%)
Frame = +2
Query: 479 VTVGTMALTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALIAETR 658
V+V ++ +++YG+ + +L+PFFC ++FDF ++ L A L YL +I + +
Sbjct: 86 VSVLMFIISSMLVYGSISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLP 145
Query: 659 RVPFXXXXXXXXXXXXXXXXXXXXXXXXXXKGYCIXVVWRCYKYLTMR 802
P+ K Y I VW CYKY+ R
Sbjct: 146 DFPYKDDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNR 193
Score = 48.0 bits (109), Expect(2) = 5e-17
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +2
Query: 161 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 340
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 341 SNVGRTGD 364
+ R D
Sbjct: 71 YSSERMAD 78
>AC079145-1|AAX88938.1| 196|Homo sapiens unknown protein.
Length = 196
Score = 61.3 bits (142), Expect = 4e-09
Identities = 30/108 (27%), Positives = 48/108 (44%)
Frame = +2
Query: 479 VTVGTMALTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALIAETR 658
V+V ++ +++YGA + +L+PFFC ++FDF ++ L A L YL +I + +
Sbjct: 49 VSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLP 108
Query: 659 RVPFXXXXXXXXXXXXXXXXXXXXXXXXXXKGYCIXVVWRCYKYLTMR 802
P+ K Y I VW CYKY+ R
Sbjct: 109 DFPYKDDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNR 156
>AY464186-1|AAS46603.1| 281|Homo sapiens complement inhibitory
receptor protein.
Length = 281
Score = 54.4 bits (125), Expect = 5e-07
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +2
Query: 410 YSQHASHPSDHSLIYHDAD-VGAMVTVGTMALTLIMIYGAARGKPAYLLPFFCLQIFDFA 586
Y+Q S I H + + VT ++A M++GA +P +LLPFF +Q+FD
Sbjct: 8 YTQKNERGSHEVKIKHFSPYIAVCVTTFSLAFCCFMVHGAITKQPTHLLPFFFIQVFDLT 67
Query: 587 ITILTATGYLCYLRQIHALIAETRRVPFXXXXXXXXXXXXXXXXXXXXXXXXXXKGYCIX 766
I ++ G++ + +I T+ P K Y +
Sbjct: 68 ICLIHILGFMSSTSDLRLMI-HTKTGPI-----YIKSTGFTFIILSISCMMLAFKAYRLG 121
Query: 767 VVWRCYKYLTM 799
VW CYKYL +
Sbjct: 122 TVWDCYKYLML 132
>AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein.
Length = 38
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 161 SERGSEWLCCFCLHVRTGTIILGSWHL 241
S+R CC C HVRTGTIILG+W++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYM 37
>AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.008
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHL 241
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.008
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHL 241
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.008
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 185 CCFCLHVRTGTIILGSWHL 241
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>U51240-1|AAB08975.1| 262|Homo sapiens lysosomal-associated
multitransmembrane protein protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 500 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 610
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>U30498-1|AAA74018.1| 262|Homo sapiens E3 protein protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 500 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 610
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>D42042-1|BAA07643.1| 269|Homo sapiens KIAA0085 protein.
Length = 269
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 500 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 610
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 83 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 119
>BC106897-1|AAI06898.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 500 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 610
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>BC106896-1|AAI06897.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 500 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 610
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>AL137857-1|CAI19321.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 500 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 610
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>AL137027-1|CAI19267.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 500 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 610
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>BC112064-1|AAI12065.1| 194|Homo sapiens methyl-CpG binding domain
protein 3-like 1 protein.
Length = 194
Score = 33.9 bits (74), Expect = 0.74
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = -3
Query: 796 RQVLVATPHNXNAVAFNYHGHDQSRDDDEGKSWRRQPQQLLAEGNATGLRNQGMDLTQVT 617
R V TPH N V YH ++S + + W+R+ Q L A +A G + +DL
Sbjct: 37 RPVTRITPHPGNEV--RYHQWEESLEKPQQVCWQRRLQGLQAYSSA-GELSSTLDLANTL 93
Query: 616 QIASCRQNGDSKVEDL 569
Q G S +EDL
Sbjct: 94 QKLVPSYTGGSLLEDL 109
>BC112058-1|AAI12059.1| 194|Homo sapiens methyl-CpG binding domain
protein 3-like protein.
Length = 194
Score = 33.9 bits (74), Expect = 0.74
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = -3
Query: 796 RQVLVATPHNXNAVAFNYHGHDQSRDDDEGKSWRRQPQQLLAEGNATGLRNQGMDLTQVT 617
R V TPH N V YH ++S + + W+R+ Q L A +A G + +DL
Sbjct: 37 RPVTRITPHPGNEV--RYHQWEESLEKPQQVCWQRRLQGLQAYSSA-GELSSTLDLANTL 93
Query: 616 QIASCRQNGDSKVEDL 569
Q G S +EDL
Sbjct: 94 QKLVPSYTGGSLLEDL 109
>AY038022-1|AAK72591.1| 194|Homo sapiens methyl-CpG binding domain
protein 3-like protein.
Length = 194
Score = 33.9 bits (74), Expect = 0.74
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = -3
Query: 796 RQVLVATPHNXNAVAFNYHGHDQSRDDDEGKSWRRQPQQLLAEGNATGLRNQGMDLTQVT 617
R V TPH N V YH ++S + + W+R+ Q L A +A G + +DL
Sbjct: 37 RPVTRITPHPGNEV--RYHQWEESLEKPQQVCWQRRLQGLQAYSSA-GELSSTLDLANTL 93
Query: 616 QIASCRQNGDSKVEDL 569
Q G S +EDL
Sbjct: 94 QKLVPSYTGGSLLEDL 109
>AL139100-5|CAI20353.1| 1440|Homo sapiens RP3-349A12.1 protein.
Length = 1440
Score = 33.5 bits (73), Expect = 0.97
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 296 LLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADV 469
L E ES P S SNV V +PL N + SP + + PS LI+H V
Sbjct: 1135 LESESGPESVPPGSLSNVSDNAGVQGSPLVNNYGQGSPAANSSVSPSGEDLIFHPVSV 1192
>AL033520-3|CAI20282.1| 1440|Homo sapiens RP3-349A12.1 protein.
Length = 1440
Score = 33.5 bits (73), Expect = 0.97
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 296 LLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADV 469
L E ES P S SNV V +PL N + SP + + PS LI+H V
Sbjct: 1135 LESESGPESVPPGSLSNVSDNAGVQGSPLVNNYGQGSPAANSSVSPSGEDLIFHPVSV 1192
>AB126777-1|BAD32740.1| 1440|Homo sapiens ICBP90 binding protein 1
protein.
Length = 1440
Score = 33.5 bits (73), Expect = 0.97
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 296 LLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADV 469
L E ES P S SNV V +PL N + SP + + PS LI+H V
Sbjct: 1135 LESESGPESVPPGSLSNVSDNAGVQGSPLVNNYGQGSPAANSSVSPSGEDLIFHPVSV 1192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,451,800
Number of Sequences: 237096
Number of extensions: 3089111
Number of successful extensions: 8113
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 7494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8096
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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