Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E09
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    25   1.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.6  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   6.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   8.1  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   8.1  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   8.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.1  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 538 FPTSGAVDHNQCESHGTHCNHRTHIRIM 455
           +PT   + HN  ++    CN   H+RI+
Sbjct: 203 WPTGRGIYHNDDKTFLVWCNEEDHLRII 230


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 742 HGHDQSRDDDEGKSWRRQPQQLLAE 668
           HGHD  +D+D  +     P  +  E
Sbjct: 706 HGHDSGQDEDMAEDLSMAPDIMTPE 730


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +1

Query: 637 CLDCGDPSRSLPRGVA--AAAGASSCLR 714
           CL CGD       G+A  +A G   C +
Sbjct: 36  CLGCGDSCHKCKYGIAMSSACGIVQCAK 63


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = -3

Query: 688 PQQLLAEGNATGLRNQGMDLTQVTQIASCRQNGDSKVEDLKTEE 557
           P  ++A  NAT     G       ++   RQN     +D   +E
Sbjct: 241 PSAVVATSNATAAMTTGTTTIPTRRLRKRRQNDGEGADDRDDDE 284


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 187 LLLSTCSDWHNYPGIMAP 240
           LL+ST   W N+  ++AP
Sbjct: 126 LLISTGQKWRNHRKLIAP 143


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 511 NQCESHGTHCNH 476
           NQC++   HC+H
Sbjct: 34  NQCQAVNGHCSH 45


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 511 NQCESHGTHCNH 476
           NQC++   HC+H
Sbjct: 34  NQCQAVNGHCSH 45


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 217 NYPGIMAPFPAPSGTRSFSSDCA*SSI 297
           +YPG  +  P+PS   SF S  + +S+
Sbjct: 82  SYPGGGSSSPSPSSPSSFFSSVSPTSL 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,002
Number of Sequences: 438
Number of extensions: 4938
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)