Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_E07
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PV37 Cluster: ENSANGP00000011689; n=5; Culicidae|Rep:...    73   3e-12
UniRef50_Q0MTE6 Cluster: Putative uncharacterized protein; n=1; ...    64   1e-09
UniRef50_Q9VVG5 Cluster: CG7630-PA; n=3; Schizophora|Rep: CG7630...    64   2e-09
UniRef50_UPI00005179D1 Cluster: PREDICTED: similar to CG7630-PA;...    52   5e-06
UniRef50_UPI00015B4B27 Cluster: PREDICTED: hypothetical protein;...    52   7e-06
UniRef50_Q6B8E9 Cluster: Putative uncharacterized protein; n=3; ...    46   6e-04
UniRef50_Q4D5F3 Cluster: Putative uncharacterized protein; n=9; ...    35   1.2  
UniRef50_Q4THR7 Cluster: Chromosome undetermined SCAF2735, whole...    34   1.5  
UniRef50_Q6AS23 Cluster: Putative uncharacterized protein; n=1; ...    34   1.5  
UniRef50_Q9U599 Cluster: Gom; n=1; Drosophila melanogaster|Rep: ...    33   3.6  
UniRef50_A7EEG9 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_Q3S7S7 Cluster: Pol protein; n=1; Human immunodeficienc...    32   8.2  

>UniRef50_Q7PV37 Cluster: ENSANGP00000011689; n=5; Culicidae|Rep:
           ENSANGP00000011689 - Anopheles gambiae str. PEST
          Length = 89

 Score = 73.3 bits (172), Expect = 3e-12
 Identities = 36/89 (40%), Positives = 49/89 (55%)
 Frame = +3

Query: 78  PIKMFVTRQIASRFFQQTVRRYHGXSHFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLF 257
           P++      I +  F    R YHG ++F+  TM+++PVP+G +   H    R +N VL  
Sbjct: 3   PVRYIANLSIRNAAFLS--RGYHGPNNFRVYTMNDMPVPEGDFFEEHRRKNRVYNTVLAA 60

Query: 258 GIXXXXXXXXXXKTSGLVYLNYSPPKSLD 344
           GI          K SGL+YLNYSPPKSLD
Sbjct: 61  GIVIFGITLTVAKESGLIYLNYSPPKSLD 89


>UniRef50_Q0MTE6 Cluster: Putative uncharacterized protein; n=1;
           Triatoma brasiliensis|Rep: Putative uncharacterized
           protein - Triatoma brasiliensis
          Length = 58

 Score = 64.5 bits (150), Expect = 1e-09
 Identities = 26/53 (49%), Positives = 34/53 (64%)
 Frame = +3

Query: 174 MDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXXKTSGLVYLNYSPP 332
           MD+LPVP GSWQ+ ++ NQ ++N  L  G+          K SGL+YLNYSPP
Sbjct: 1   MDDLPVPCGSWQTQYNTNQAKYNMQLAIGVIFTVVTIIAAKASGLIYLNYSPP 53


>UniRef50_Q9VVG5 Cluster: CG7630-PA; n=3; Schizophora|Rep: CG7630-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 90

 Score = 64.1 bits (149), Expect = 2e-09
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = +3

Query: 141 YHGXSHFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXXKTSGLVYLN 320
           YHG  H    TM++LPVP G W+  H     ++NA L+ GI          K+SG+++ N
Sbjct: 24  YHG-GHGPHSTMNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFN 82

Query: 321 YSPPKSLD 344
           Y  PKSLD
Sbjct: 83  YYAPKSLD 90


>UniRef50_UPI00005179D1 Cluster: PREDICTED: similar to CG7630-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG7630-PA
           - Apis mellifera
          Length = 94

 Score = 52.4 bits (120), Expect = 5e-06
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
 Frame = +3

Query: 102 QIASRFFQQTVRRYHGXS---HFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLFGIXXX 272
           Q  +R  + ++R YH      + KPPTMDE+ VP GSW+  +   + ++N   + G+   
Sbjct: 7   QSITRNAKSSMRSYHANKIPDNVKPPTMDEVLVPCGSWKEANAKARTKYNLQFVAGVVIL 66

Query: 273 XXXXXXXKTSGLVYLNYSPPKSLD 344
                  + +G+++LN+ PP   D
Sbjct: 67  AATIAYGRITGVLWLNFLPPTPKD 90


>UniRef50_UPI00015B4B27 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 91

 Score = 52.0 bits (119), Expect = 7e-06
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
 Frame = +3

Query: 93  VTRQIASRFFQ---QTVRRYHGXSHFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLFGI 263
           + R IA R  Q   Q  R  H  S+FK  T+DE   P G W+ + +  QR++NA L+ G+
Sbjct: 5   ILRPIARRAIQKGAQQTRLAHHESNFKYVTLDEACHPLGPWKENFEKQQRKYNAHLVIGL 64

Query: 264 XXXXXXXXXXKTSGLVYLNYSPP 332
                         L++ NY+PP
Sbjct: 65  TMFIGTCVAINRFELLFFNYAPP 87


>UniRef50_Q6B8E9 Cluster: Putative uncharacterized protein; n=3;
           Ixodoidea|Rep: Putative uncharacterized protein - Ixodes
           pacificus (western blacklegged tick)
          Length = 93

 Score = 45.6 bits (103), Expect = 6e-04
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
 Frame = +3

Query: 93  VTRQIASRFFQQTVRR-------YHGXSHFKPPTMDELPVPKGSWQSHHDANQRRFNAVL 251
           + R  A R  Q  +RR        +   HFKPPTMD+LP   G W+ H+   Q +FN  L
Sbjct: 2   IARLAAQRTLQSMLRRPAVRPSTSYAPDHFKPPTMDDLPKFLGPWEEHYAKRQAKFNMQL 61

Query: 252 LFGIXXXXXXXXXXKTSGLVYLNYSPP 332
              +           +  +V    +PP
Sbjct: 62  AAAVAFFLTTSFVVYSMDIVDFVDAPP 88


>UniRef50_Q4D5F3 Cluster: Putative uncharacterized protein; n=9;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 284

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 31  PCVAPKCLKLPPQSALQSKCS*HAKLHLGSSNKQCVA-TMAXVTSSPPPWMNYQCP 195
           PCV      +     L S C+ H  L L   +++C+A  +  V S PPP + + CP
Sbjct: 176 PCVEADPFTVESMQQLSSVCAAHLALALSHVSQRCLACDLMSVLSRPPPPVFFWCP 231


>UniRef50_Q4THR7 Cluster: Chromosome undetermined SCAF2735, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF2735,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 229

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 23/76 (30%), Positives = 34/76 (44%)
 Frame = +1

Query: 10  SXFSSLRPCVAPKCLKLPPQSALQSKCS*HAKLHLGSSNKQCVATMAXVTSSPPPWMNYQ 189
           S FS    CV P CL + P ++ +S      + +L S    C A +     SP P  ++ 
Sbjct: 141 SAFSGFAGCVLPACLSVRPTASFRSPPPLIPRSYLSSQVLSCGAAL-RPRKSPRPQRSFG 199

Query: 190 CPKAHGSRTMMPTNVA 237
            P   G +  +PT VA
Sbjct: 200 YPP--GMKPCIPTEVA 213


>UniRef50_Q6AS23 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 212

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +2

Query: 17  FHRCVLALLQSVSNFLHKARSNQNVRNTPNCI*VLPTNSASLPWRKSLQAPH 172
           F  C L LL S S  L + + + N++   N   V+PT      W+KS +A H
Sbjct: 47  FLACCLLLLLSSSVALAEVKDDSNIQPAENQAQVMPTQPQDSTWQKSKEAGH 98


>UniRef50_Q9U599 Cluster: Gom; n=1; Drosophila melanogaster|Rep: Gom
           - Drosophila melanogaster (Fruit fly)
          Length = 305

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +3

Query: 174 MDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXXKTSGLVYLNYSPPK 335
           + + P P+G +     A   R+N +L+ GI           +SG++ LN++ P+
Sbjct: 83  LSDCPKPEGDFMKAWSAKNSRYNLILVSGILAAGGTLGFALSSGVLCLNWTIPE 136


>UniRef50_A7EEG9 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 197

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 206 AVAP*CQPTSLQCCAPLWNCIHCCYIRRCKN 298
           A+A  CQPT   C    WN +  CY  +C N
Sbjct: 57  AIAQACQPTDYNCLCTSWNAVLTCY-NQCPN 86


>UniRef50_Q3S7S7 Cluster: Pol protein; n=1; Human immunodeficiency
           virus 1|Rep: Pol protein - Human immunodeficiency virus
           1
          Length = 75

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +3

Query: 57  TSSTKRAPIKMFVTRQIASRFFQQTVRRYHGXSHFKPPTMDELPVPKGSWQSHHDANQRR 236
           T   +R P+KM  T    S F   TV+     +  K    D LP+PK    S+ D     
Sbjct: 5   TKLAERWPVKMIHTDN-GSNFTSNTVKAACSSAGIKQEFRDSLPIPKSGESSNPDKISEN 63

Query: 237 FNAV 248
            +AV
Sbjct: 64  HSAV 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,429,104
Number of Sequences: 1657284
Number of extensions: 6985759
Number of successful extensions: 17954
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17947
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)