Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_E06
(460 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 31 0.61
SB_12383| Best HMM Match : EGF_CA (HMM E-Value=2.5e-12) 30 0.80
SB_23241| Best HMM Match : EGF_CA (HMM E-Value=6.3e-30) 29 1.4
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_56410| Best HMM Match : CXCXC (HMM E-Value=0.014) 29 2.4
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_53660| Best HMM Match : COLFI (HMM E-Value=1.5) 27 7.5
SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073) 27 7.5
SB_5573| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_44575| Best HMM Match : DUF444 (HMM E-Value=0.84) 27 9.9
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_28793| Best HMM Match : Furin-like (HMM E-Value=2.6) 27 9.9
SB_30137| Best HMM Match : Phosphodiest (HMM E-Value=0) 27 9.9
SB_16815| Best HMM Match : TIL (HMM E-Value=0.39) 27 9.9
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 85 GINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDC 201
G ECP Y G NC++ CA S R CDC
Sbjct: 264 GYCKEECPRGIY--GRNCSYTCQCAYNQTCSKRDGLCDC 300
>SB_12383| Best HMM Match : EGF_CA (HMM E-Value=2.5e-12)
Length = 228
Score = 30.3 bits (65), Expect = 0.80
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 136 CAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKEC 258
C C + + +N +C CKPGL+ D + KC +C
Sbjct: 136 CDTSNPCHVNATCTNTVGSYECSCKPGLVGDGL--KCADDC 174
>SB_23241| Best HMM Match : EGF_CA (HMM E-Value=6.3e-30)
Length = 200
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +1
Query: 73 ISCLGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCD-------CWCKPGLIRDS 231
++ +G + C P G NCA C+LRS + ++ C C CK G D
Sbjct: 136 VNTIGSFACTCKPGYTGDGINCADIDECSLRSDNCHQDAICSNTAASFTCTCKQGFKGDG 195
Query: 232 IA 237
++
Sbjct: 196 VS 197
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.7 bits (61), Expect = 2.4
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = +1
Query: 85 GINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCW-CKPGLIRDSIAHKCVKECP 261
G+ +EC +Y G C C + DC C PG + H CV ECP
Sbjct: 947 GVCESECSKGRYKSGDACK---PCHVSCNACRGPAKGDCLRCNPGHVY--FKHTCVTECP 1001
Query: 262 KYDEILD*LHNSDLITVRAYR*CNFLC 342
+ + D SD R R C+ C
Sbjct: 1002 EGTFVDD----SDGADARRCRPCHAAC 1024
>SB_56410| Best HMM Match : CXCXC (HMM E-Value=0.014)
Length = 272
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +1
Query: 145 ETICALRSAHSN--RKHY----CDCWCKPGLIRDSIAHKCVKECPKYDEILD*LHNSDLI 306
E C ++S H + R++Y C C CK + +KC KE P Y+ + N D+
Sbjct: 207 EEACRIKSHHCDPIRQYYDERTCSCKCKANYTYFKLGYKCGKE-PDYEFT---VRNCDIH 262
Query: 307 TVRA 318
RA
Sbjct: 263 ATRA 266
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 187 HYCDCWCKPGLIRDSIAHKCVKECPK 264
H C+ C PG D + ++C K CPK
Sbjct: 1766 HVCEKVCHPG-DPDHVEYECRKPCPK 1790
>SB_53660| Best HMM Match : COLFI (HMM E-Value=1.5)
Length = 471
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +1
Query: 73 ISCLGINSAECPPDQYDPG---PNCAFETICALRSAHSNRKHYCD 198
I C+G A C PD Y G +C C + A N + CD
Sbjct: 412 IGCIGDRQATCFPDDYALGVGVSSCKDGYGCTVVGASRNMHYRCD 456
>SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073)
Length = 498
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 115 QYDPGPNCAFETIC-ALRSAHSNRKHYCDCWCK 210
Q+D N A +T+ A + +SNR H DC CK
Sbjct: 32 QWDKKENDADKTVRDAQKQQYSNRGHLIDCNCK 64
>SB_5573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 128 VQIAPSRQSVHYEAHTQTGNTTVTAG 205
V + PSR+ + YE H GN + + G
Sbjct: 100 VFLGPSRREIRYEGHVTRGNKSSSMG 125
>SB_44575| Best HMM Match : DUF444 (HMM E-Value=0.84)
Length = 451
Score = 26.6 bits (56), Expect = 9.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 160 LRSAHSNRKHYCDCW 204
+R H N HYCD W
Sbjct: 366 MREKHGNIAHYCDLW 380
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 104 VHRTNTIRVQIAPSRQSVHYEAHTQTGNTTVT 199
VH + + + P + + ++H TGNTT T
Sbjct: 682 VHHSPDPKPPVLPDKSGIIQKSHNSTGNTTPT 713
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 372 QINKAFIQDFT*KITSSIRPNSNEIGI 292
+IN+ + D T K T+S PN EIG+
Sbjct: 251 KINEGTLNDITTKETASGNPNVTEIGV 277
>SB_28793| Best HMM Match : Furin-like (HMM E-Value=2.6)
Length = 300
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Frame = +1
Query: 124 PGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHK----------CVKECPK 264
P C + S + + +CD C+PG + SI K CVKECPK
Sbjct: 165 PQKVCHVTNCLSCESVSYHGRRHCDT-CRPGYHKHSIHAKFGFGMIYDDVCVKECPK 220
>SB_30137| Best HMM Match : Phosphodiest (HMM E-Value=0)
Length = 655
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 104 VHRTNTIRVQIAPSRQSVHYEAHTQTGNTTVT 199
VH + + + P + + ++H TGNTT T
Sbjct: 584 VHHSPDPKPPVLPDKSGIIQKSHNSTGNTTPT 615
>SB_16815| Best HMM Match : TIL (HMM E-Value=0.39)
Length = 225
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/61 (26%), Positives = 22/61 (36%)
Frame = +1
Query: 76 SCLGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKE 255
S I S+ Q + IC RSA + HY D WC+ + H +
Sbjct: 118 SVTSIQSSSAKTTQVSSSVTTSDAVICKARSAFA---HYGDLWCQQQCDQPGAEHCLFEN 174
Query: 256 C 258
C
Sbjct: 175 C 175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,954,308
Number of Sequences: 59808
Number of extensions: 245061
Number of successful extensions: 574
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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