Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_E03
(735 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 61 8e-12
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 26 0.36
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 24 1.5
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 4.5
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 4.5
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 5.9
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 22 5.9
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 7.8
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 7.8
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 7.8
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 61.3 bits (142), Expect = 8e-12
Identities = 42/153 (27%), Positives = 73/153 (47%)
Frame = +1
Query: 106 LVRKDKQFEFNNEHRLVFNMLKEKLTSKPVLKIYEPKAETELHTDASSIAYAAILLQKDD 285
L+RK +++ + + F+ +K+ +L+ + + TD+S A L Q +
Sbjct: 562 LLRKGEKWRWGRNEQEAFDRVKDLFLEAVLLRYPDLNKIFYVQTDSSGYGLGAELYQIQE 621
Query: 286 NSELHPVHYMSKRTTDAESKYTSYELEALAIIEGIKKFRHYLYGKHFKIVTDCKAFQMTL 465
+ + + S+ E YT+ E E L +I + KFR Y+ I TD +A + L
Sbjct: 622 DGSRGVIAFASRSLRGPELNYTTTEKELLGVIFALHKFRIYIQVTKIIIRTDHQALKF-L 680
Query: 466 NKKDLAMSTRVARWILFLQDYDFTIEHREGSKM 564
++ L +S R+ RW L L YD+ IE +G M
Sbjct: 681 SRCRL-LSERLTRWTLILGQYDYEIELVKGKGM 712
Score = 24.6 bits (51), Expect = 0.84
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 28 VXKQVKEWLEQGVIRVSFSEYTSPIVLVRK 117
V ++E L+ GVI+ S Y SP+ + +K
Sbjct: 321 VDATIQEMLDLGVIKREASPYASPMTVGKK 350
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 25.8 bits (54), Expect = 0.36
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 100 IVLVRKDKQFEFNNEHRLVFNMLK-EKLTSKPVLKIYEPKAETELHTD 240
IVL K+ Q EF EH++ + K + P+ + E + E EL D
Sbjct: 179 IVLHMKEDQTEFLEEHKIKEIVKKHSQFIGYPIKLVVEKEREKELSDD 226
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 280 DDNSELHPVHYMSKRTTDAESKYTSYELEALAIIEG 387
D+N++ + S+ KYT+Y +E LA G
Sbjct: 1148 DENTKDTKITAASETILHGLKKYTNYSMEVLAYTSG 1183
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 529 HNLVRTISIVPLLYSLLDLFYSV 461
HN ++TI VPLL + F +
Sbjct: 231 HNEIQTIFSVPLLMKIASQFVGI 253
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 529 HNLVRTISIVPLLYSLLDLFYSV 461
HN ++TI VPLL + F +
Sbjct: 56 HNEIQTIFSVPLLMKIASQFVGI 78
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 508 SIVPLLYSLLDLFYSVSFEKLCSL 437
++ P+LY+++ + F KLC +
Sbjct: 347 AVNPILYNIISSKFRSGFFKLCGM 370
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 399 KLLYTFYYSQSF*LITCIF 343
+L + FYY+ +I CIF
Sbjct: 151 QLYFQFYYTYFLCVIVCIF 169
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.4 bits (43), Expect = 7.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 304 LDVVHCCHLSVII*PHMLYLRHLYEVLFLLLVH 206
L V C + V+ Y HL+ VL+++L+H
Sbjct: 153 LAYVWICEMGVVT--LQAYTLHLFCVLYVVLLH 183
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +1
Query: 307 HYMSKRTTDAESKYTSYELEALAIIEGIKKFRHYLY 414
HY S + +Y+++ + +A++E +Y+Y
Sbjct: 133 HYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVY 168
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.4 bits (43), Expect = 7.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 304 LDVVHCCHLSVII*PHMLYLRHLYEVLFLLLVH 206
L V C + V+ Y HL+ VL+++L+H
Sbjct: 153 LAYVWICEMGVVT--LQAYTLHLFCVLYVVLLH 183
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,066
Number of Sequences: 336
Number of extensions: 3384
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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