BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_E03
(735 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 26 1.1
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 26 1.1
EF519525-1|ABP73588.1| 250|Anopheles gambiae APL2 protein. 25 3.2
EF519519-1|ABP73582.1| 250|Anopheles gambiae APL2 protein. 25 3.2
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 4.2
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 4.2
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 26.2 bits (55), Expect = 1.1
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -2
Query: 668 AFNPLSLSCARLKSL-C-RSENIRATY 594
AFNPL L+C L+++ C +SEN+ Y
Sbjct: 325 AFNPLILTCDHLRNVDCDKSENVIVDY 351
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 26.2 bits (55), Expect = 1.1
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -2
Query: 668 AFNPLSLSCARLKSL-C-RSENIRATY 594
AFNPL L+C L+++ C +SEN+ Y
Sbjct: 324 AFNPLILTCDHLRNVDCDKSENVIVDY 350
>EF519525-1|ABP73588.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 24.6 bits (51), Expect = 3.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 607 IFSDLHSDLRRAQESDNGLNAIMNILRDG 693
+F DL SDL R + NGL AI + L G
Sbjct: 84 VFDDL-SDLERLELQQNGLGAIDDRLFQG 111
>EF519519-1|ABP73582.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 24.6 bits (51), Expect = 3.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 607 IFSDLHSDLRRAQESDNGLNAIMNILRDG 693
+F DL SDL R + NGL AI + L G
Sbjct: 84 VFDDL-SDLERLELQQNGLGAIDDRLFQG 111
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 154 VFNMLKEKLTSKPVLKIYEPKAET 225
+FN + KLTS PV ++++ + T
Sbjct: 1161 LFNFQRNKLTSLPVGEVFDTNSNT 1184
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 154 VFNMLKEKLTSKPVLKIYEPKAET 225
+FN + KLTS PV ++++ + T
Sbjct: 1162 LFNFQRNKLTSLPVGEVFDTNSNT 1185
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,832
Number of Sequences: 2352
Number of extensions: 12903
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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