Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_D24
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   5.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.1  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    22   5.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   6.7  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 263 SPIGDQYLHPH 295
           SPI ++++HPH
Sbjct: 93  SPIDEKFVHPH 103


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
          protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 5  RPMDIVHDNPRATRLPHVKPHIRNH 79
          +P +    + R TR  H+K H+R H
Sbjct: 8  KPFECQECHKRFTRDHHLKTHMRLH 32


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 396 LSSNNLALEPECCYQ 352
           L  N+ ALEPE C+Q
Sbjct: 571 LGINSDALEPEWCWQ 585


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 524 TSLPLPLYRLKFKKALTLSTPASRLTRNAPPXKPSQTPKLPDN 652
           +SL LP+Y L  K  +     ++ +  + P    S  P+L  N
Sbjct: 55  SSLILPIYGLSTKPKIMQGAISNHIQGSKPNILSSAFPRLKRN 97


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 5   RPMDIVHDNPRATRLPHVKPHIRNH 79
           +P +    + R TR  H+K H+R H
Sbjct: 161 KPFECQECHKRFTRDHHLKTHMRLH 185


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 186 EQNFNNYQPQQQE 224
           ++NF NY+P+  E
Sbjct: 226 QENFENYEPKSPE 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,824
Number of Sequences: 336
Number of extensions: 3625
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)