Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D24
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28850| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 31 0.82
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 30 1.4
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 29 3.3
SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_33412| Best HMM Match : ANF_receptor (HMM E-Value=0) 29 3.3
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0) 29 4.4
SB_38053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_36050| Best HMM Match : HLH (HMM E-Value=0.004) 28 5.8
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 28 5.8
SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10) 28 7.6
SB_4050| Best HMM Match : VPEP (HMM E-Value=3.6) 28 7.6
SB_22139| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_28850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 141 VSLKPEQQVEDQLPLEQNFNNYQPQQQEYRSAKPVDDFRPKVQLETSTYIPII 299
+SL+P + ++ L NF +Y QQ RS+ P++ QL TST I ++
Sbjct: 158 ISLQPLKGIKSDKDLVSNFKSY---QQSARSSSPINVATNSKQLTTSTPIKVM 207
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 31.1 bits (67), Expect = 0.82
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +1
Query: 169 KTNSHLNKTSTTIS---PSNRNIGQQNQSMTSD-LKSNWRPVPTSPLSVSIRNKEPTEAT 336
K + KT I+ P+ + QQ QS T++ L +N + ++I N PT+
Sbjct: 737 KNTQQITKTLININNNNPTQQQKQQQQQSTTTNTLNNNKNTQQITKTLININNNNPTQQQ 796
Query: 337 KLHMKLVTTFRLKSKVI*RQSVITKTTLLWSN 432
+ + + TT + S K WSN
Sbjct: 797 QPYSSMQTTILFRQDYYIYYSNCNKIICEWSN 828
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 533 PLPLYRLKFKKALTLSTPASRLTRNAPPXKPSQTP 637
P P+ L + STP SR T + PP PS TP
Sbjct: 822 PSPMPSLSPLSSTDSSTPRSRRTIDLPPTSPSYTP 856
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/102 (26%), Positives = 41/102 (40%)
Frame = +3
Query: 129 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRSAKPVDDFRPKVQLETSTYIPIIRFD 308
P+ K S KP+ Q D+ + +PQ Q+ ++A+P +L+
Sbjct: 25 PKTKTS-KPQDQ--DKQAARPRQASRKPQDQDKQAARPRQASLKTSKLQDQNNQAARPRQ 81
Query: 309 KEQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQ 434
Q S KTS N Q +T +QDNT V+Q
Sbjct: 82 ARQARQASLKTSKLQDQNKQDARPASRRTKPQDQDNTRQVRQ 123
>SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 151 SQNSKWKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRPVPTSPLSVSIRN 315
S NS W+TN T++SPS N NQS + N P + + S RN
Sbjct: 513 SPNSSWQTNQSGGLALTSLSPS-LNRPSSNQSPSMSRYGNHSPTKRAREAESKRN 566
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1
Query: 169 KTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRPVPTSPLSVS 306
+T HL++ + TIS + + + Q++ SD++S VPTSP++ S
Sbjct: 379 ETIRHLSEQNETISNTYKGM-DQSELEESDVRSQSGSVPTSPVTPS 423
>SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 321 TDGSYK--TSYETGNNIQAQEQGYLKTVGDNQDNTALVQ 431
TDGS + TSYE+ + I Q+ +NQD +AL+Q
Sbjct: 282 TDGSMRENTSYESCHTISGQDAARSAPPNNNQDYSALMQ 320
>SB_33412| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 852
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 231 SAKPVDDFRPKVQLETSTYIPIIRFDKEQGTDGSYK-TSYETGNNIQAQEQGYLKTVGDN 407
S K + DF V ++Y +RF+K Q DG+Y +++ N E + GD
Sbjct: 404 SGKTLIDFLRNVTFPDASYGWPVRFNKNQEMDGNYSIMNFQYQNGKWVYENVGSWSWGDE 463
Query: 408 QDNTAL 425
DN +
Sbjct: 464 SDNVRM 469
>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 759
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 166 WKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRPVPT-SPLSVSIRNKEPTEATKL 342
W++ H++ T P RN+G +SD ++++R + T +P + T +
Sbjct: 109 WRSKQHIDLPPITNPPPTRNLGSTG---SSDNRTHYRRIETKAPRRLEPLKPNTASRTSV 165
Query: 343 HMKLVTTFR 369
++V+ +R
Sbjct: 166 KPRIVSVYR 174
>SB_38053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -1
Query: 528 DVVTGNSETELVSG--VLDGNDLTIQGL-CMYRIPVGPEQCCL-GYHRLSSN 385
++V+GN++T+ S ++ + L C++ PV P++C L G +RL SN
Sbjct: 31 NIVSGNTQTKTASTYVIVKCKCSMMSNLGCVHEPPVQPDRCALSGNYRLESN 82
>SB_36050| Best HMM Match : HLH (HMM E-Value=0.004)
Length = 141
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 166 WKTNSHLNKTSTTISPSNRNIG 231
WKT SH KTS TI R G
Sbjct: 103 WKTTSHARKTSCTIIDETRGSG 124
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 157 NSKWKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNW-RPVPTSPLSV-SIRNKE 321
+ KW N ++ + SN NI N S+ KS + R PT P SV S KE
Sbjct: 241 HDKWSENGEDRNSTGKTNSSNENITVSNSVRMSEGKSVFKRNRPTEPASVPSTETKE 297
>SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 156 EQQVEDQLPLEQNFNNYQPQQQEYRSAKPVDDFRPKVQLE 275
+QQ++ Q +Q QPQQQ+ + +P + QL+
Sbjct: 103 QQQLQQQQQQQQQLQQQQPQQQQQQQQQPQQQQPQQQQLQ 142
>SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 156 EQQVEDQLPLEQNFNNYQPQQQEYRSAKPVDDFRPKVQLE 275
+QQ++ Q +Q QPQQQ+ + +P + QL+
Sbjct: 102 QQQLQQQQQQQQQLQQQQPQQQQQQQQQPQQQQPQQQQLQ 141
>SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10)
Length = 798
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/43 (23%), Positives = 26/43 (60%)
Frame = +1
Query: 151 SQNSKWKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRP 279
+ N + K + N+T TT+ P+ ++ +++ +++ ++S RP
Sbjct: 326 TNNCRTKHEAFSNQTQTTVEPNTKHYRTKHKRLSAQIRSIVRP 368
>SB_4050| Best HMM Match : VPEP (HMM E-Value=3.6)
Length = 569
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 172 TNSHLNKTSTTISPSNRN-IGQQNQ 243
TNS LNKT + I+P RN + Q NQ
Sbjct: 231 TNSTLNKTHSNITPGERNALTQLNQ 255
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 172 TNSHLNKTSTTISPSNRN-IGQQNQ 243
TNS LNKT + I+P RN + Q NQ
Sbjct: 422 TNSTLNKTHSNITPGERNALTQLNQ 446
>SB_22139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = -1
Query: 558 NFSRYRGRGRDVVTGNSETELVSGVLDGNDLTIQGLCMYRIPVGPEQCCLGYHRLSSNNL 379
N + R + D T N++ ++ G + G ++ G + L Y L +NL
Sbjct: 698 NMRKLRSKAGDKATSNAKENALNAAYGGE--VVVGSDATKLSYGIKNLELEYESLRDDNL 755
Query: 378 ALEPECCYQ 352
AL YQ
Sbjct: 756 ALSAAAAYQ 764
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,348,982
Number of Sequences: 59808
Number of extensions: 467329
Number of successful extensions: 1916
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1897
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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