Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D22
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 2.9
AC084153-8|AAK84585.1| 380|Caenorhabditis elegans Hypothetical ... 29 3.9
Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.1
AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate cyc... 29 5.1
AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble guany... 29 5.1
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 28 6.8
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 28 6.8
Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical p... 28 9.0
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 9.0
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 9.0
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 9.0
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 9.0
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 366 SFFYRLSYLYAYNLYKETQIFL 301
SFFYRL + Y L ETQIFL
Sbjct: 309 SFFYRLVQIQFYRLRIETQIFL 330
>AC084153-8|AAK84585.1| 380|Caenorhabditis elegans Hypothetical
protein Y22D7AL.11 protein.
Length = 380
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 321 KETQIFLFFCSYWVELMKIYHSWDFW 244
K+T ++ CSYW + I S++FW
Sbjct: 53 KKTTCNIYLCSYWFSTIFISKSFNFW 78
>Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical
protein C06B3.8 protein.
Length = 646
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = +1
Query: 433 LDLTHVVFPKRKQSVHMLDVQKVVQEVILVLLHQTDPQ 546
LD+T VV + ++SVHM + ++V + V+ ++ + ++P+
Sbjct: 123 LDITLVVQGRTQRSVHMNNGERVEEHVVFLINNLSEPR 160
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/85 (31%), Positives = 34/85 (40%)
Frame = +3
Query: 66 ANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFXXXXXXXXXXXXXXXRNIVTPPKKKQRSP 245
++RS SR+ KRSR S + S S S + R+ PKK RSP
Sbjct: 231 SSRSKSRSRSPPKRSRRESKSKSRSRSRSR---------SADNRKSRSPSRSPKKVDRSP 281
Query: 246 KNPKNDRSSLTPPNSYKRTERSVSP 320
P+ RS R RS SP
Sbjct: 282 SPPRGSRS--PSEKGSPRRSRSASP 304
>AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 684
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = +1
Query: 433 LDLTHVVFPKRKQSVHMLDVQKVVQEVILVLLHQTDPQ 546
LD+T VV + ++SVHM + ++V + V+ ++ + ++P+
Sbjct: 161 LDITLVVQGRTQRSVHMNNGERVEEHVVFLINNLSEPR 198
>AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble
guanylate cyclase protein.
Length = 684
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = +1
Query: 433 LDLTHVVFPKRKQSVHMLDVQKVVQEVILVLLHQTDPQ 546
LD+T VV + ++SVHM + ++V + V+ ++ + ++P+
Sbjct: 161 LDITLVVQGRTQRSVHMNNGERVEEHVVFLINNLSEPR 198
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 219 PPKKKQRSPKNPKNDRSSLTPPNSYKRTERSVSPCKDY 332
PP K++SPK P+ + S TP +++ V P Y
Sbjct: 492 PPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAY 529
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 219 PPKKKQRSPKNPKNDRSSLTPPNSYKRTERSVSPCKDY 332
PP K++SPK P+ + S TP +++ V P Y
Sbjct: 492 PPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAY 529
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 216 TPPKKKQRSPKN-PKNDRSSLTPPNSYKRTERS 311
TP KK +RS + PK +S P N +++ E+S
Sbjct: 659 TPAKKSRRSATHTPKTPKSDKKPANKHEKDEKS 691
>Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical
protein F01D4.3 protein.
Length = 561
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 204 RNIVTPPKKKQRSPKNPKNDRSSLTPPNSYKRTERS 311
R++ P +K PK+P N P ++ K T+R+
Sbjct: 9 RSVYFTPAQKSNKPKSPPNASPGAAPTSTTKTTKRA 44
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 207 NIVTPPKKKQRSPKNPKNDRSSLTP 281
N+ TP K ++PK P+ R+ TP
Sbjct: 460 NLTTPAPKTPKTPKTPRTPRTPKTP 484
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 207 NIVTPPKKKQRSPKNPKNDRSSLTP 281
N+ TP K ++PK P+ R+ TP
Sbjct: 410 NLTTPAPKTPKTPKTPRTPRTPKTP 434
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 207 NIVTPPKKKQRSPKNPKNDRSSLTP 281
N+ TP K ++PK P+ R+ TP
Sbjct: 460 NLTTPAPKTPKTPKTPRTPRTPKTP 484
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 207 NIVTPPKKKQRSPKNPKNDRSSLTP 281
N+ TP K ++PK P+ R+ TP
Sbjct: 460 NLTTPAPKTPKTPKTPRTPRTPKTP 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,638,726
Number of Sequences: 27780
Number of extensions: 190934
Number of successful extensions: 762
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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