BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D20
(760 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068439-1|AAH68439.1| 480|Homo sapiens chromosome 19 open read... 155 2e-37
BC036706-1|AAH36706.1| 471|Homo sapiens C19orf28 protein protein. 141 2e-33
BC092414-1|AAH92414.1| 530|Homo sapiens major facilitator super... 35 0.37
BC011587-1|AAH11587.1| 530|Homo sapiens major facilitator super... 35 0.37
AL663070-2|CAI20268.1| 530|Homo sapiens major facilitator super... 35 0.37
AK075183-1|BAC11456.1| 530|Homo sapiens protein ( Homo sapiens ... 35 0.37
AB073383-1|BAD38634.1| 530|Homo sapiens putative protein produc... 35 0.37
AL663070-1|CAI20267.1| 266|Homo sapiens major facilitator super... 34 0.64
BC042197-1|AAH42197.1| 465|Homo sapiens major facilitator super... 33 1.1
BC030542-1|AAH30542.1| 332|Homo sapiens MFSD1 protein protein. 33 1.1
AK024215-1|BAB14852.1| 465|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB065528-1|BAC05775.1| 294|Homo sapiens seven transmembrane hel... 31 6.0
AB014732-1|BAB20269.1| 466|Homo sapiens SMAP-4 protein. 30 7.9
>BC068439-1|AAH68439.1| 480|Homo sapiens chromosome 19 open reading
frame 28 protein.
Length = 480
Score = 155 bits (376), Expect = 2e-37
Identities = 75/169 (44%), Positives = 103/169 (60%), Gaps = 7/169 (4%)
Frame = +2
Query: 230 YGLGHVYNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLLLGQVVDALATPVVGVLAD--- 400
Y +GH NDLCA+MWF+Y+LL+ +V + AG +LLLGQV D L TP+VG AD
Sbjct: 25 YAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVGYEADRAA 84
Query: 401 ----KYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAVLIIFFQI 568
+YG +KAWHL G + V +FP +F C GC W LYY I+ FQ
Sbjct: 85 SCCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGC----GAATPEWAALLYYGPFIVIFQF 140
Query: 569 GWAVVQISHLAMIPSITDNLQVRAELTSIRYMASVMSSLTVYLITWVVL 715
GWA QISHL++IP + N + ELT++RY +V++++TVY W++L
Sbjct: 141 GWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLLL 189
>BC036706-1|AAH36706.1| 471|Homo sapiens C19orf28 protein protein.
Length = 471
Score = 141 bits (342), Expect = 2e-33
Identities = 70/162 (43%), Positives = 100/162 (61%)
Frame = +2
Query: 230 YGLGHVYNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLLLGQVVDALATPVVGVLADKYG 409
Y +GH NDLCA+MWF+Y+LL+ +V + AG +LLLGQV D L TP+VG AD+
Sbjct: 25 YAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVGYEADRAA 84
Query: 410 TKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAVLIIFFQIGWAVVQI 589
+ A + T C+L+ +FP +F C GC W LYY I+ FQ GWA QI
Sbjct: 85 SCCARYGTVCVLL--SFPFIFSPCLGC----GAATPEWAALLYYGPFIVIFQFGWASTQI 138
Query: 590 SHLAMIPSITDNLQVRAELTSIRYMASVMSSLTVYLITWVVL 715
SHL++IP + N + ELT++RY +V++++TVY W++L
Sbjct: 139 SHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLLL 180
>BC092414-1|AAH92414.1| 530|Homo sapiens major facilitator
superfamily domain containing 2 protein.
Length = 530
Score = 34.7 bits (76), Expect = 0.37
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Frame = +2
Query: 170 EVDSSASYKRRWWRVSQNVLYGLGHV-YNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLL 346
+V K++ V + Y LG Y A+ F ++ ++ V + A +L
Sbjct: 29 QVKKEPKKKKQQLSVCNKLCYALGGAPYQVTGCALGF-FLQIYLLDVAQVGPFSASIILF 87
Query: 347 LGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATF--PLLFIRCWGCWFNENTQY-- 514
+G+ DA+ P+VG+ +K W G ++ F PL I + WF + +
Sbjct: 88 VGRAWDAITDPLVGLCI----SKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQ 143
Query: 515 LYWWMPLY--YAVLIIFFQIGWAVV 583
YW++ Y + ++ F + ++ +
Sbjct: 144 TYWYLLFYCLFETMVTCFHVPYSAL 168
>BC011587-1|AAH11587.1| 530|Homo sapiens major facilitator
superfamily domain containing 2 protein.
Length = 530
Score = 34.7 bits (76), Expect = 0.37
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Frame = +2
Query: 170 EVDSSASYKRRWWRVSQNVLYGLGHV-YNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLL 346
+V K++ V + Y LG Y A+ F ++ ++ V + A +L
Sbjct: 29 QVKKEPKKKKQQLSVCNKLCYALGGAPYQVTGCALGF-FLQIYLLDVAQVGPFSASIILF 87
Query: 347 LGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATF--PLLFIRCWGCWFNENTQY-- 514
+G+ DA+ P+VG+ +K W G ++ F PL I + WF + +
Sbjct: 88 VGRAWDAITDPLVGLCI----SKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQ 143
Query: 515 LYWWMPLY--YAVLIIFFQIGWAVV 583
YW++ Y + ++ F + ++ +
Sbjct: 144 TYWYLLFYCLFETMVTCFHVPYSAL 168
>AL663070-2|CAI20268.1| 530|Homo sapiens major facilitator
superfamily domain containing 2 protein.
Length = 530
Score = 34.7 bits (76), Expect = 0.37
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Frame = +2
Query: 170 EVDSSASYKRRWWRVSQNVLYGLGHV-YNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLL 346
+V K++ V + Y LG Y A+ F ++ ++ V + A +L
Sbjct: 29 QVKKEPKKKKQQLSVCNKLCYALGGAPYQVTGCALGF-FLQIYLLDVAQVGPFSASIILF 87
Query: 347 LGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATF--PLLFIRCWGCWFNENTQY-- 514
+G+ DA+ P+VG+ +K W G ++ F PL I + WF + +
Sbjct: 88 VGRAWDAITDPLVGLCI----SKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQ 143
Query: 515 LYWWMPLY--YAVLIIFFQIGWAVV 583
YW++ Y + ++ F + ++ +
Sbjct: 144 TYWYLLFYCLFETMVTCFHVPYSAL 168
>AK075183-1|BAC11456.1| 530|Homo sapiens protein ( Homo sapiens
cDNA FLJ90702 fis, clone PLACE1007096, weakly similar to
PUTATIVE SUGAR TRANSPORT PROTEIN GUTA. ).
Length = 530
Score = 34.7 bits (76), Expect = 0.37
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Frame = +2
Query: 170 EVDSSASYKRRWWRVSQNVLYGLGHV-YNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLL 346
+V K++ V + Y LG Y A+ F ++ ++ V + A +L
Sbjct: 29 QVKKEPKKKKQQLSVCNKLCYALGGAPYQVTGCALGF-FLQIYLLDVAQVGPFSASIILF 87
Query: 347 LGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATF--PLLFIRCWGCWFNENTQY-- 514
+G+ DA+ P+VG+ +K W G ++ F PL I + WF + +
Sbjct: 88 VGRAWDAITDPLVGLCI----SKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQ 143
Query: 515 LYWWMPLY--YAVLIIFFQIGWAVV 583
YW++ Y + ++ F + ++ +
Sbjct: 144 TYWYLLFYCLFETMVTCFHVPYSAL 168
>AB073383-1|BAD38634.1| 530|Homo sapiens putative protein product
of HMFN0656 protein.
Length = 530
Score = 34.7 bits (76), Expect = 0.37
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Frame = +2
Query: 170 EVDSSASYKRRWWRVSQNVLYGLGHV-YNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLL 346
+V K++ V + Y LG Y A+ F ++ ++ V + A +L
Sbjct: 29 QVKKEPKKKKQQLSVCNKLCYALGGAPYQVTGCALGF-FLQIYLLDVAQVGPFSASIILF 87
Query: 347 LGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATF--PLLFIRCWGCWFNENTQY-- 514
+G+ DA+ P+VG+ +K W G ++ F PL I + WF + +
Sbjct: 88 VGRAWDAITDPLVGLCI----SKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQ 143
Query: 515 LYWWMPLY--YAVLIIFFQIGWAVV 583
YW++ Y + ++ F + ++ +
Sbjct: 144 TYWYLLFYCLFETMVTCFHVPYSAL 168
>AL663070-1|CAI20267.1| 266|Homo sapiens major facilitator
superfamily domain containing 2 protein.
Length = 266
Score = 33.9 bits (74), Expect = 0.64
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Frame = +2
Query: 194 KRRWWRVSQNVLYGLGHV-YNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLLLGQVVDAL 370
K++ V + Y LG Y A+ F ++ ++ V + A +L +G+ DA+
Sbjct: 35 KKQQLSVCNKLCYALGGAPYQVTGCALGF-FLQIYLLDVAQVGPFSASIILFVGRAWDAI 93
Query: 371 ATPVVGVLADKYGTKKAWHLTGCILVTATF--PLLFIRCWGCWFNENTQY--LYWWMPLY 538
P+VG+ +K W G ++ F PL I + WF + + YW++ Y
Sbjct: 94 TDPLVGLCI----SKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFY 149
Query: 539 --YAVLIIFFQIGWAVV 583
+ ++ F + ++ +
Sbjct: 150 CLFETMVTCFHVPYSAL 166
>BC042197-1|AAH42197.1| 465|Homo sapiens major facilitator
superfamily domain containing 1 protein.
Length = 465
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +2
Query: 290 LFFQAVLDMRAVVAGAMLLLGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATFPLL 469
+FF + A A+ + V+ A +PV G+L DK G W L + +L
Sbjct: 289 VFFTEKFGFSSQAASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMML 348
Query: 470 FIRCWGCW 493
W W
Sbjct: 349 AFTMWNPW 356
>BC030542-1|AAH30542.1| 332|Homo sapiens MFSD1 protein protein.
Length = 332
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +2
Query: 290 LFFQAVLDMRAVVAGAMLLLGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATFPLL 469
+FF + A A+ + V+ A +PV G+L DK G W L + +L
Sbjct: 192 VFFTEKFGFSSQAASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMML 251
Query: 470 FIRCWGCW 493
W W
Sbjct: 252 AFTMWNPW 259
>AK024215-1|BAB14852.1| 465|Homo sapiens protein ( Homo sapiens
cDNA FLJ14153 fis, clone NT2RM1000092, weakly similar to
MULTIDRUG RESISTANCE PROTEIN 2. ).
Length = 465
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +2
Query: 290 LFFQAVLDMRAVVAGAMLLLGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATFPLL 469
+FF + A A+ + V+ A +PV G+L DK G W L + +L
Sbjct: 289 VFFTEKFGFSSQAASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMML 348
Query: 470 FIRCWGCW 493
W W
Sbjct: 349 AFTMWNPW 356
>AB065528-1|BAC05775.1| 294|Homo sapiens seven transmembrane helix
receptor protein.
Length = 294
Score = 30.7 bits (66), Expect = 6.0
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 542 AVLIIFFQIGWAVVQISHLAMIPSITDNLQVRAELTSIRYMASVMSSLTVYLITWVVL 715
AVLI+ +G V +S++ +I S+ + + + S + ++ V+ I WVVL
Sbjct: 203 AVLILVTGVGTPCVALSYILIIHSVLNIISSEGRRKAFDTCGSHIGAVAVFYIPWVVL 260
>AB014732-1|BAB20269.1| 466|Homo sapiens SMAP-4 protein.
Length = 466
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 356 VVDALATPVVGVLADKYGTKKAWHLTGCILVTATFPLLFIRCWGCW 493
V+ A +PV G+L DK G W L + +L W W
Sbjct: 312 VISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMMLAFTMWNPW 357
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,257,713
Number of Sequences: 237096
Number of extensions: 2503378
Number of successful extensions: 4889
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4885
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -