Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D20
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical pr... 153 2e-37
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 31 0.89
U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical p... 31 0.89
AL110498-4|CAE18014.2| 336|Caenorhabditis elegans Hypothetical ... 29 2.7
AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical ... 29 2.7
AL033512-2|CAA22074.1| 390|Caenorhabditis elegans Hypothetical ... 29 3.6
Z82051-2|CAB04816.1| 237|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 29 4.7
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 29 4.7
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 29 4.7
Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70038-2|CAA93885.2| 399|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical
protein F16H11.1 protein.
Length = 501
Score = 153 bits (370), Expect = 2e-37
Identities = 69/184 (37%), Positives = 120/184 (65%), Gaps = 10/184 (5%)
Frame = +2
Query: 215 SQNVLYGLGHVYNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLLLGQVVDALATPVVGVL 394
++ + +G+GH YNDLCA+MWF+Y +++ + VL ++ AG ++L+GQV DA++TP+VG+
Sbjct: 35 TKKIAFGIGHFYNDLCASMWFTYFMIYMEKVLKFQSSRAGMLMLIGQVTDAISTPLVGIF 94
Query: 395 A---------DKYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAV 547
+ DK G + +WHL G +LV+ +FP++F +C+ C + W L++
Sbjct: 95 SDSNILPACFDKIGRRMSWHLIGTVLVSLSFPMIFNKCFLC----KSTTSEWLKVLWFVP 150
Query: 548 LIIFFQIGWAVVQISHLAMIPSITDNLQVRAELTSIRYMASVMSSLTVYL-ITWVVLRAT 724
I+ FQ GWA VQISHLA+IP ++ RA + S+RY +V+++L+VY + W++ +T
Sbjct: 151 FIMVFQFGWASVQISHLALIPELSSVPASRATMNSLRYAFTVIANLSVYFALAWLLSEST 210
Query: 725 TYST 736
+++
Sbjct: 211 GHTS 214
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 298 SSSPGHESCRSWSYAASRTSCRCTCNPCCGSFG 396
S P SC + ++ SCR TC P C S G
Sbjct: 19 SPLPSTSSCGCQASSSCANSCRSTCRPTCSSSG 51
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 217 SERALRTRACLQRPLRCDVVLIHAAVLSSSPGHESCRS-WSYAASRTSCRCTCNPCCGS 390
S + +++ Q PL+ + ++ S ++CRS S S+++C TC C S
Sbjct: 136 SASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCRSSCSNRVSQSTCDATCQNTCSS 194
>U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical
protein K06C4.9 protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 521 WWMPLYYAVLIIFFQ--IGWAVVQISHLAMIPSITDNLQVRAELTSIRYMASVMSSLTVY 694
W+ LYY + IFF I +A++ ++++ +I + + + R LT+ T
Sbjct: 320 WYFYLYYGIRSIFFDALIPFAIISVTNIQVIQQLHKSNEERKLLTT---QQQKEKRTTTM 376
Query: 695 LITWVVLRATTY 730
L+ V+L AT +
Sbjct: 377 LLVMVILYATCH 388
>AL110498-4|CAE18014.2| 336|Caenorhabditis elegans Hypothetical
protein Y64G10A.8 protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 335 AMLLLGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQY 514
A+LL ++ L P++G L + + +HL IL+ +FI C F +
Sbjct: 22 ALLLSFLILSILILPLMGWLITRIAKNQLYHLNTRILLIIHCSGIFIHCADRLFLHTSDL 81
Query: 515 LYWWMPLY 538
W + +Y
Sbjct: 82 YNWHVAMY 89
>AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical
protein Y48G8AL.9 protein.
Length = 295
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 627 RLSVIDGIIARCEICTTAQPIWKNIIRTA*YSGIHQYKYCVFSLNQQPQHLMNSNGNVAV 448
+ S + I RCEIC P K YS H+ ++ Q +M+ + N+ +
Sbjct: 183 KTSGVSSFIRRCEICEIDLPT-KRASDAHFYSEDHETAQLMYPSKNTTQPMMSVDRNLGM 241
Query: 447 TKMHPV 430
MH +
Sbjct: 242 PNMHAI 247
>AL033512-2|CAA22074.1| 390|Caenorhabditis elegans Hypothetical
protein Y49A3A.3 protein.
Length = 390
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -2
Query: 675 ITEAIYL-IEVNSAR--T*RLSVIDGIIARCEICTTAQPIWK 559
I +A Y+ I+ NS R T R ID EICTT IWK
Sbjct: 78 IRDAEYIKIDANSIRGETKRTDKIDRRATEDEICTTVHKIWK 119
>Z82051-2|CAB04816.1| 237|Caenorhabditis elegans Hypothetical
protein T23D5.3 protein.
Length = 237
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 399 SAKTPTTGVASASTTCPRSSIAPATTALMSRTA*KNSSMY 280
+A + TTG SA+TT + P TTA +S K++ +Y
Sbjct: 124 TAGSATTGSPSAATTAATVAAPPTTTAAVSILTLKSAFLY 163
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 517 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 383
Q++C F+KP TS E R R +P + V QN H
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 545
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 517 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 383
Q++C F+KP TS E R R +P + V QN H
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 560
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 517 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 383
Q++C F+KP TS E R R +P + V QN H
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 545
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 517 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 383
Q++C F+KP TS E R R +P + V QN H
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 560
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 517 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 383
Q++C F+KP TS E R R +P + V QN H
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 545
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 517 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 383
Q++C F+KP TS E R R +P + V QN H
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 560
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 517 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 383
Q++C F+KP TS E R R +P + V QN H
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 560
>Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical
protein E04D5.2 protein.
Length = 404
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +2
Query: 440 ILVTATFPLLFIRCWGCWFNENTQ--YLY--WWMPLYYAVLIIFFQIGWAVVQIS 592
+L+ T+ LLF G W+ +NT +LY + +P+++ ++ F I + ++ I+
Sbjct: 72 MLICLTYTLLFGVDAGIWYRKNTTLFFLYHRYIVPVFFIAKVVQFAIPFILILIT 126
>Z70038-2|CAA93885.2| 399|Caenorhabditis elegans Hypothetical
protein ZK1067.3 protein.
Length = 399
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 399 SAKTPTTGVASASTTCPRSSIAPATTALMSRTA*KNSS 286
S K PT +A ++ P+ S+AP + ++ +NSS
Sbjct: 33 STKPPTVPIAPRASIAPKQSVAPMVSMAPQQSIAQNSS 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,766,267
Number of Sequences: 27780
Number of extensions: 391209
Number of successful extensions: 1121
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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