Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_D20
         (760 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   1.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   1.0  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   9.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.5  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 550 YYIFPNWLGRGTNLTSGYDSVNHRQ 624
           Y  F  WLG G  +++G    NHR+
Sbjct: 115 YRFFKPWLGDGLLISTGQKWRNHRK 139


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 173  VDSSASYKRRWWRVSQNVLYGLGHVYNDLCAAMWF 277
            V+     ++ W +VS NV  G   V  DL  A W+
Sbjct: 1496 VEHKKKNQQEWNQVSNNVKPGGNFVVLDLVPATWY 1530


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 196 EKMVACQSERALRTRACLQRPLRCDVVLIHAAVLSSS 306
           + ++  +SER LR R C++  L   + L++  V   S
Sbjct: 39  DSLLEDESERMLRKRGCIEACLFHRLALMNDNVFDVS 75


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 350 GQVVDALATPVVGVLADKYG 409
           G+V   L TP VGV A   G
Sbjct: 579 GEVTTPLFTPAVGVAAASAG 598


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,014
Number of Sequences: 438
Number of extensions: 4478
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)