Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_D17
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.62 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.62 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 552 LYTIILKFV-CISNLCGNTGLKLLAACANSTNSSSFLQIVDYSF 424
           LY I+   +  ++++ G T + +LA C  S+ SS +  I  Y F
Sbjct: 209 LYRILTTMMEMVNDIFGWTLILILAKCITSSLSSLYTCIAGYEF 252


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 240 PQHLTCYFTTFTMKSRVYSNY*ENFVDR 323
           P H  C F+ + +KS  Y N    F +R
Sbjct: 309 PTHFYCAFSLYPLKSTFYLNVVRPFPER 336


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 186 YHCIKNHLFCSHHPLTKSPQHLTCYFTTFTM 278
           Y  I NH   S     K+  H+T  +   TM
Sbjct: 539 YETISNHTDASSAKAVKNSDHITRIYACATM 569


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 186 YHCIKNHLFCSHHPLTKSPQHLTCYFTTFTM 278
           Y  I NH   S     K+  H+T  +   TM
Sbjct: 539 YETISNHTDASSAKAVKNSDHITRIYACATM 569


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 186 YHCIKNHLFCSHHPLTKSPQHLTCYFTTFTM 278
           Y  I NH   S     K+  H+T  +   TM
Sbjct: 539 YETISNHTDASSAKAVKNSDHITRIYACATM 569


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 186 YHCIKNHLFCSHHPLTKSPQHLTCYFTTFTM 278
           Y  I NH   S     K+  H+T  +   TM
Sbjct: 539 YETISNHTDASSAKAVKNSDHITRIYACATM 569


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 364 RHTYEHPESSPAVPLSTKFSQ*FEY 290
           +H+Y+ P++ PA   ST     F Y
Sbjct: 77  QHSYQSPQTQPARFYSTPIVPHFAY 101


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 137 IYSQLGKCISIGTIANIPLHQE 202
           IYS + K +S  ++ N  LH+E
Sbjct: 43  IYSPVSKPVSFESLPNRRLHEE 64


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 321 RGTAGEDSGCSYVCRPKH 374
           R    ED   SY CR KH
Sbjct: 188 RDVGPEDGYKSYQCRTKH 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,960
Number of Sequences: 336
Number of extensions: 2929
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)