Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_D17
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    24   3.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.6  

>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 519 SNLCGNTGLKLLAACAN--STNSSSF 448
           S+ CG  G K L  CA+   T +SSF
Sbjct: 64  SSRCGEIGRKTLVCCASEQQTRTSSF 89


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 373 IFEHSTTYNLMKLTTMGE 426
           +F  +  YNL KLTT+ E
Sbjct: 201 LFRFNNQYNLEKLTTIDE 218


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 408 TYNHGGMNSRQSARRMNCWWN*HMQLA 488
           T  H    + ++  R++ W   H+QLA
Sbjct: 674 TPEHAAAVAEEAVERVHAWMRHHLQLA 700


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,755
Number of Sequences: 2352
Number of extensions: 11710
Number of successful extensions: 54
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)