Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_D15
         (597 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W4X8 Cluster: CG13761-PB; n=4; Diptera|Rep: CG13761-P...    36   0.96 
UniRef50_UPI000065F20D Cluster: Homolog of Brachydanio rerio "An...    33   6.7  
UniRef50_Q19YB6 Cluster: Gp33; n=2; unclassified Siphoviridae|Re...    33   6.7  

>UniRef50_Q9W4X8 Cluster: CG13761-PB; n=4; Diptera|Rep: CG13761-PB -
           Drosophila melanogaster (Fruit fly)
          Length = 468

 Score = 35.5 bits (78), Expect = 0.96
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 153 DGSEILVHGLETPACVVMDSALLRTPDLLAIQFENHLDLP*HYLNLNYCN*CT 311
           +G+E+ VH +E   C+      +   DLL    +  LDL  HY  L  C+ CT
Sbjct: 231 EGNELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCT 283


>UniRef50_UPI000065F20D Cluster: Homolog of Brachydanio rerio
           "Ankyrin repeat domain 6.; n=1; Takifugu rubripes|Rep:
           Homolog of Brachydanio rerio "Ankyrin repeat domain 6. -
           Takifugu rubripes
          Length = 187

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 460 CECV*CQDVNAIKRSDFFCIRRMLCCL*G 374
           C+CV C+D    +   FFC R   CCL G
Sbjct: 147 CQCVICRDQRGQEVCFFFCCRFFFCCLIG 175


>UniRef50_Q19YB6 Cluster: Gp33; n=2; unclassified Siphoviridae|Rep:
           Gp33 - Mycobacterium phage PLot
          Length = 288

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 265 SKWFSNCIAKRSGVLNKAESITTHAGVSKPCTNISEPSGFQLL 137
           S WF  CI   SGV++    +TT+   + P   ++EP G Q+L
Sbjct: 186 SGWFGVCIFAFSGVVSVGTPVTTYGSGTSPSQVVTEP-GVQIL 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,840,532
Number of Sequences: 1657284
Number of extensions: 8495821
Number of successful extensions: 16865
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16865
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)