Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D14
(842 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming] beta-... 267 3e-70
UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 229 5e-59
UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular organisms... 225 1e-57
UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 202 7e-51
UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 200 3e-50
UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific suc... 197 3e-49
UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase be... 188 1e-46
UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb CG106... 180 5e-44
UniRef50_A0F011 Cluster: Succinate-CoA ligase ADP-forming beta s... 175 9e-43
UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102, w... 174 2e-42
UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit, putat... 167 3e-40
UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;... 161 2e-38
UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 160 3e-38
UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, wh... 155 2e-36
UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase be... 151 2e-35
UniRef50_Q01AE2 Cluster: Succinyl-CoA-ligase beta subunit; n=1; ... 147 3e-34
UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=2... 147 3e-34
UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=1... 145 1e-33
UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1... 140 3e-32
UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=1... 140 3e-32
UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=3... 139 7e-32
UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 138 1e-31
UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma j... 136 6e-31
UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=7... 135 2e-30
UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase (ADP-form... 134 3e-30
UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3... 134 3e-30
UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=8... 132 8e-30
UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=2... 131 2e-29
UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 128 2e-28
UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n... 124 3e-27
UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit, p... 123 5e-27
UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit; ... 121 3e-26
UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=9... 118 2e-25
UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n... 117 4e-25
UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chai... 116 7e-25
UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7... 116 1e-24
UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=1... 115 1e-24
UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta ... 114 2e-24
UniRef50_Q8D2D7 Cluster: SucC protein; n=4; Gammaproteobacteria|... 114 3e-24
UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=4... 113 4e-24
UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8... 112 1e-23
UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 109 9e-23
UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n... 107 3e-22
UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n... 107 5e-22
UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5... 104 2e-21
UniRef50_Q5T9Q8 Cluster: Succinate-CoA ligase, ADP-forming, beta... 103 4e-21
UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6... 103 7e-21
UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6... 102 1e-20
UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n... 98 3e-19
UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit f... 97 4e-19
UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1... 97 6e-19
UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n... 97 6e-19
UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine ligase-... 94 3e-18
UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 92 1e-17
UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2... 90 6e-17
UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n... 90 6e-17
UniRef50_Q8G6B4 Cluster: Succinyl-CoA synthetase beta chain; n=3... 89 1e-16
UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit; ... 89 1e-16
UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine ligase-... 88 2e-16
UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n... 87 4e-16
UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), bet... 86 1e-15
UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit; ... 85 3e-15
UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4; ... 81 3e-14
UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine ligase-... 81 5e-14
UniRef50_Q07LP6 Cluster: Succinate--CoA ligase; n=1; Rhodopseudo... 79 1e-13
UniRef50_A3GUP8 Cluster: Succinyl-CoA synthetase beta chain; n=1... 76 1e-12
UniRef50_A6LP53 Cluster: Succinate--CoA ligase; n=1; Thermosipho... 73 9e-12
UniRef50_Q0PQT6 Cluster: Succinyl CoA ligase beta subunit; n=1; ... 70 8e-11
UniRef50_Q8IQ64 Cluster: CG10622-PB, isoform B; n=1; Drosophila ... 69 2e-10
UniRef50_P72927 Cluster: Succinate--CoA ligase; n=3; Chroococcal... 67 5e-10
UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus ... 67 6e-10
UniRef50_A0RTT8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 66 1e-09
UniRef50_A1RXJ2 Cluster: Transcriptional regulator, Fis family; ... 61 3e-08
UniRef50_Q4J9C1 Cluster: Succinyl-CoA synthetase beta chain; n=4... 59 2e-07
UniRef50_Q8YQB9 Cluster: Succinyl-CoA synthetase beta chain; n=4... 56 8e-07
UniRef50_Q110Z1 Cluster: Succinate--CoA ligase; n=2; Oscillatori... 56 8e-07
UniRef50_A7HMU2 Cluster: Succinate--CoA ligase; n=1; Fervidobact... 56 8e-07
UniRef50_UPI0000F2DCF5 Cluster: PREDICTED: hypothetical protein;... 51 4e-05
UniRef50_Q8KDG1 Cluster: Citrate lyase, subunit1; n=11; Chlorobi... 51 4e-05
UniRef50_Q39YX4 Cluster: Succinyl-CoA synthetase beta subunit-li... 47 7e-04
UniRef50_Q8R6L7 Cluster: UDP-N-acetylmuramyl tripeptide synthase... 41 0.045
UniRef50_Q1NU51 Cluster: Cyanophycin synthetase; n=3; delta prot... 39 0.14
UniRef50_A0LDT1 Cluster: ATP-grasp domain protein; n=5; Proteoba... 38 0.24
UniRef50_Q1VJG9 Cluster: Succinyl-CoA synthetase, beta subunit; ... 38 0.32
UniRef50_A0GFR9 Cluster: CoA-binding; n=1; Burkholderia phytofir... 38 0.42
UniRef50_Q8ZTH6 Cluster: Putative uncharacterized protein PAE324... 38 0.42
UniRef50_Q58010 Cluster: Uncharacterized protein MJ0590; n=6; Me... 38 0.42
UniRef50_Q8DW15 Cluster: Glutathione biosynthesis bifunctional p... 38 0.42
UniRef50_Q9V1X5 Cluster: AcdB acetate--coA ligase (ADP-forming) ... 37 0.55
UniRef50_A2QQL9 Cluster: Contig An08c0100, complete genome; n=5;... 36 0.96
UniRef50_A0DDG8 Cluster: Chromosome undetermined scaffold_46, wh... 36 1.3
UniRef50_A2BMF5 Cluster: Conserved archaeal protein; n=2; Archae... 36 1.3
UniRef50_Q2BI31 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_Q1Q7K5 Cluster: Strongly similar to acetate-CoA ligase ... 36 1.7
UniRef50_Q26CD7 Cluster: Putative nucleoside diphosphate sugar p... 34 3.9
UniRef50_P07244 Cluster: Bifunctional purine biosynthetic protei... 34 3.9
UniRef50_Q97NY4 Cluster: NAD-dependent epimerase/dehydratase fam... 34 5.1
UniRef50_A1WYS2 Cluster: Phosphoribosylaminoimidazole carboxylas... 34 5.1
UniRef50_A1IDG9 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_Q653A4 Cluster: Basic helix-loop-helix-like; n=4; Oryza... 34 5.1
UniRef50_O80261 Cluster: Orf 498; n=1; Vibrio phage fs2|Rep: Orf... 34 5.1
UniRef50_A2EVI4 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_Q4J9J2 Cluster: Phosphoribosylaminoimidazole carboxylas... 34 5.1
UniRef50_A2SRS8 Cluster: CoA-binding domain protein; n=4; Methan... 34 5.1
UniRef50_Q4SMD7 Cluster: Chromosome 3 SCAF14553, whole genome sh... 33 6.8
UniRef50_Q5P5S5 Cluster: Predicted Acetyl-CoA synthetase; n=4; P... 33 6.8
UniRef50_Q86AJ2 Cluster: Similar to Dictyostelium discoideum (Sl... 33 6.8
UniRef50_Q9FKD7 Cluster: E3 ubiquitin-protein ligase SINA-like 7... 33 6.8
UniRef50_P77886 Cluster: Carbamoyl-phosphate synthase pyrimidine... 33 6.8
UniRef50_Q4SK98 Cluster: Chromosome 13 SCAF14566, whole genome s... 33 9.0
UniRef50_Q47X73 Cluster: Pyridoxamine 5'-phosphate oxidase / oxi... 33 9.0
UniRef50_O69824 Cluster: Putative uncharacterized protein SCO643... 33 9.0
UniRef50_Q1I3D8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q18UC2 Cluster: Cyanophycin synthetase; n=2; Desulfitob... 33 9.0
UniRef50_A5DPX5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
>UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor; n=82; cellular
organisms|Rep: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 463
Score = 267 bits (654), Expect = 3e-70
Identities = 133/239 (55%), Positives = 174/239 (72%), Gaps = 2/239 (0%)
Frame = +2
Query: 131 KQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGR 310
+QQ R+L++HEY+S LL++ G+ VPK VAK+ DEA A +L +KD+V+KAQVLAGGR
Sbjct: 47 QQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGR 106
Query: 311 GKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRRE 490
GKGTF++GLKGGV++V +PE A ++ +M+ + L TKQTG GRICN V+V ERK+PRRE
Sbjct: 107 GKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRRE 166
Query: 491 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKI 670
YY AI MERSF GPV+I SS GGVNIEDVAAE+P+AI EPIDI GI +Q ++ +K+
Sbjct: 167 YYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKM 226
Query: 671 GLQEFATE--AHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
G E A M+ K+Y LFLK DA +IE+NP E + G C+DAK FD N+ +
Sbjct: 227 GFPPNIVESAAENMV-KLYSLFLKYDATMIEINPMVEDS-DGAVLCMDAKINFDSNSAY 283
>UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=55; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 432
Score = 229 bits (561), Expect = 5e-59
Identities = 121/234 (51%), Positives = 153/234 (65%), Gaps = 1/234 (0%)
Frame = +2
Query: 143 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT 322
R LN+ EY S L+ D+G+ V +F VA T +EA++ A LN K+IVLKAQ+LAGGRGKG
Sbjct: 36 RWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGV 95
Query: 323 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVA 502
F +GLKGGV + P V G +A +M+ L TKQT G N VMV E RE Y+A
Sbjct: 96 FNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLA 155
Query: 503 IMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIG-LQ 679
I+M+RS NGPV++ S QGGV+IE+VAA NP+ I E IDI GI D Q R+ E +G +
Sbjct: 156 ILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVG 215
Query: 680 EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
++A I K+Y+LFLK DA +EVNP+ E GQ C DAK FDDNAEF
Sbjct: 216 PLKSQAADQITKLYNLFLKIDATQVEVNPFGETP-EGQVVCFDAKINFDDNAEF 268
>UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular
organisms|Rep: Suclg2 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 419
Score = 225 bits (550), Expect = 1e-57
Identities = 119/234 (50%), Positives = 148/234 (63%), Gaps = 1/234 (0%)
Frame = +2
Query: 143 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT 322
R LN+ EY S L++D G+ V +F VA T EA++ A L K+IVLKAQ+LAGGRGKG
Sbjct: 23 RWLNLQEYQSKKLMQDSGVAVQRFFVADTASEALEAAKRLKAKEIVLKAQILAGGRGKGV 82
Query: 323 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVA 502
F +GLKGGV + P V G++A KML L TKQT G VMV E RE Y A
Sbjct: 83 FNSGLKGGVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKTVMVAEALDISRETYFA 142
Query: 503 IMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ- 679
I+M+RS NGPV++ S QGG++IE+VAA P+ I E IDI G+ DDQ R+ +G +
Sbjct: 143 ILMDRSCNGPVMVGSPQGGMDIEEVAAATPELIFKEVIDIFEGVRDDQALRMAANLGFKG 202
Query: 680 EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+A IK++YDLFLK DA +EVNP E GQ C DAK FDDNAEF
Sbjct: 203 PLERQAADQIKRLYDLFLKVDATQVEVNPLGETP-EGQVVCFDAKINFDDNAEF 255
>UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor; n=23; Fungi/Metazoa
group|Rep: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 427
Score = 202 bits (494), Expect = 7e-51
Identities = 107/248 (43%), Positives = 151/248 (60%), Gaps = 3/248 (1%)
Frame = +2
Query: 107 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 286
S N + Q RHL++HEY S LLR++GI P+ A T +EA + A +LNT +V+K
Sbjct: 17 SRLNAQAALQARRHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIK 76
Query: 287 AQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVT 466
AQ L GGRGKG F G K GV M+ +P+ A D+A +ML L+TKQTG AG+ + V +
Sbjct: 77 AQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIV 136
Query: 467 ERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQ 646
+R + E Y++I+M+R P+IIASSQGG+NIE+VA PDAI I+ G++
Sbjct: 137 KRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQM 196
Query: 647 ICRVIEKIGLQEFA-TEAHGMIKKMYDLFLKKDALLIEVNPYAEXA--LTGQFFCLDAKF 817
V + +G A EA + +Y +F+++DA +E+NP +E T + C DAKF
Sbjct: 197 AKDVAKSLGFSPDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKF 256
Query: 818 XFDDNAEF 841
FDDNA F
Sbjct: 257 GFDDNASF 264
>UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=35; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 421
Score = 200 bits (489), Expect = 3e-50
Identities = 105/239 (43%), Positives = 154/239 (64%), Gaps = 3/239 (1%)
Frame = +2
Query: 134 QQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL--NTKDIVLKAQVLAGG 307
QQ+R LN+HEY L+ +G+ VPK A + +E K ++ N ++V+K+Q+LAGG
Sbjct: 22 QQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGG 81
Query: 308 RGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRR 487
RG GTFK+GLKGGV +V E A +IAGKML Q+LVTKQTG G++ + V + E+
Sbjct: 82 RGLGTFKSGLKGGVHIVKRDE-AEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVN 140
Query: 488 EYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEK 667
E Y +I+++R GP+IIA +GG +IED+A + PD I PID+ +GITD+ +V++
Sbjct: 141 EMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDG 200
Query: 668 IGLQEF-ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ + ++ +KK+Y+LF K D ++E+NP AE + T Q DAK FDDNA F
Sbjct: 201 LAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETS-TNQLVAADAKLNFDDNAAF 258
>UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit; n=1; Toxoplasma
gondii|Rep: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit - Toxoplasma gondii
Length = 498
Score = 197 bits (480), Expect = 3e-49
Identities = 112/248 (45%), Positives = 153/248 (61%), Gaps = 11/248 (4%)
Frame = +2
Query: 131 KQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKT----KDEAIKFATELNTKD-----IVL 283
++Q R LN+HEY S ++++ I PKF VA T + EA F +E + D V+
Sbjct: 66 REQRRFLNLHEYQSMRIMKEFHITTPKFAVASTAKEAEQEAATFLSESPSGDGEPVDFVV 125
Query: 284 KAQVLAGGRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVM 460
KAQVLAGGRG G F+ NG +GGV++ +P G +A KML + LVTKQTG G++CN V+
Sbjct: 126 KAQVLAGGRGLGFFRENGYQGGVQVCESPREVGIVAEKMLGKTLVTKQTGKEGKLCNKVL 185
Query: 461 VTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 640
VTER F R+E YVAI+M+R GP++I S++GG +IED+A P++I PIDI GI++
Sbjct: 186 VTERFFIRKEKYVAILMDRGAGGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISE 245
Query: 641 DQICRVIEKIGLQEFATEAH-GMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKF 817
++ E +G EA I+ +Y+LF KD IEVNP E G+ DAK
Sbjct: 246 PRLREFAELLGFSGDRLEAACQCIRGLYELFRSKDCTQIEVNPLVETH-DGRVLVCDAKL 304
Query: 818 XFDDNAEF 841
FDDNA F
Sbjct: 305 NFDDNAGF 312
>UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=9; Plasmodium|Rep: ATP-specific
succinyl-CoA synthetase beta subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 462
Score = 188 bits (459), Expect = 1e-46
Identities = 102/239 (42%), Positives = 145/239 (60%), Gaps = 6/239 (2%)
Frame = +2
Query: 143 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNT----KDIVLKAQVLAGGR 310
R+L++HEY+S LLR H +P P+ AKT +EA + A L D+V+KAQVL+GGR
Sbjct: 48 RYLSIHEYLSVDLLRSHNVPCPEGYAAKTAEEAEEKALLLQNVCGDNDLVIKAQVLSGGR 107
Query: 311 GKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRR 487
G G FK N +GGV + +IA KML L+TKQ+G G+ CN V + ER + R+
Sbjct: 108 GVGYFKENNFEGGVHVCRNSMEVKEIATKMLNNTLITKQSGPEGKKCNTVFICERFYIRK 167
Query: 488 EYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEK 667
E Y+A +++R+ +G +++ SS GG +IED+ +NPDAI IDI +G+T Q E
Sbjct: 168 ERYIAFLLDRNSDGIILLGSSIGGSSIEDIIKKNPDAIYKLNIDINNGLTTGQAREFSEN 227
Query: 668 IGLQ-EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
IG + + MI +Y +F K D L+E+NP +E G+ C DAK FDDNAE+
Sbjct: 228 IGFKNDQLNIVTDMIVNLYKVFKKYDCTLLEINPLSELN-DGRVLCCDAKLNFDDNAEY 285
>UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb
CG10622-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to Sucb CG10622-PA, isoform A - Apis
mellifera
Length = 370
Score = 180 bits (437), Expect = 5e-44
Identities = 99/241 (41%), Positives = 140/241 (58%), Gaps = 3/241 (1%)
Frame = +2
Query: 128 SKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGG 307
S +Q R+LN+ EY S LLRD G+ V F + ++A L+ + V+KAQVLAGG
Sbjct: 22 SIKQTRNLNLLEYQSKELLRDCGVSVQNFAIVDDLNKANSALQNLHANEYVIKAQVLAGG 81
Query: 308 RGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRR 487
RGKG F NG KGGV + + D+ ML L TKQT G + +M+ E R
Sbjct: 82 RGKGWFDNGFKGGVHLTKDRKAVIDVVKNMLGHRLFTKQTSEDGILVQKIMIAESVNIAR 141
Query: 488 EYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIE- 664
E Y+ I+M+R +NGPV+IAS GG++IE VA +NP+ I P+DI GI DD+I + +
Sbjct: 142 ETYICILMDRQYNGPVLIASPAGGMDIETVAEKNPELIKTIPLDIYYGI-DDEIAKDVSI 200
Query: 665 KIGLQEFATEAHGM--IKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAE 838
+G + + + +K ++ LF+ DAL +E+NP E Q +DAK FDDNA+
Sbjct: 201 FLGFMDPTVQQKAIYELKNLWKLFVDIDALQVEINPLVETT-DNQVIAVDAKISFDDNAQ 259
Query: 839 F 841
F
Sbjct: 260 F 260
>UniRef50_A0F011 Cluster: Succinate-CoA ligase ADP-forming beta
subunit; n=1; Scophthalmus maximus|Rep: Succinate-CoA
ligase ADP-forming beta subunit - Scophthalmus maximus
(Turbot)
Length = 188
Score = 175 bits (427), Expect = 9e-43
Identities = 84/148 (56%), Positives = 112/148 (75%)
Frame = +2
Query: 107 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 286
+S + +QQ R+L++HEY+S LL++ GI VP VA + +EA A ++ +KD+V+K
Sbjct: 41 ASQLQLQQQQQQRNLSLHEYMSIGLLKEAGISVPVGLVASSSEEAYAVAKQIGSKDLVVK 100
Query: 287 AQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVT 466
AQVLAGGRGKGTF+ GLKGGV++V +PE A DI+ +M+ + L TKQTG AGRICN V +
Sbjct: 101 AQVLAGGRGKGTFEGGLKGGVKIVYSPEEARDISSQMIGRKLYTKQTGEAGRICNQVFIC 160
Query: 467 ERKFPRREYYVAIMMERSFNGPVIIASS 550
ER++PRREYY AI MERSF GPV+I SS
Sbjct: 161 ERRYPRREYYFAITMERSFQGPVLIGSS 188
>UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=5;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_102, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 449
Score = 174 bits (424), Expect = 2e-42
Identities = 93/235 (39%), Positives = 140/235 (59%), Gaps = 1/235 (0%)
Frame = +2
Query: 140 VRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKD-IVLKAQVLAGGRGK 316
V+ ++HEY S L+R + V K +A D+A K A L+ ++LK+QV AGGRGK
Sbjct: 40 VKCFDLHEYQSKDLMRGFNVRVQKGAIALNADDAAKVAKTLDPSGGLILKSQVHAGGRGK 99
Query: 317 GTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYY 496
GT +GLKGGV++ TPE + +M+ LVT QT G N V+V E R+ Y
Sbjct: 100 GTLSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLY 159
Query: 497 VAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL 676
+A +++R+ P I+AS GG+ IE+VA +P++I PIDI +G+TD +V++ + L
Sbjct: 160 LAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDINTGLTDQIANKVVDTLQL 219
Query: 677 QEFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
Q +A ++ +Y +F+ DA +E+NP+A Q FC+DAK DDNA+F
Sbjct: 220 QSVRQQAVEQLRNLYKMFISLDATQVEINPWATDP-KNQLFCIDAKINVDDNAKF 273
>UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit,
putative; n=1; Babesia bovis|Rep: Succinly CoA-ligase
beta subunit, putative - Babesia bovis
Length = 436
Score = 167 bits (406), Expect = 3e-40
Identities = 91/238 (38%), Positives = 141/238 (59%), Gaps = 5/238 (2%)
Frame = +2
Query: 143 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL--NTK--DIVLKAQVLAGGR 310
R+LNV E+ +L++HGIP P +A++ EA E+ +TK ++VLKA VL GGR
Sbjct: 37 RYLNVPEFGGMRILKEHGIPTPMNRLARSPSEAEAMTHEILESTKCGEVVLKALVLTGGR 96
Query: 311 GKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRRE 490
GKG F GV + +PE A +A M+ +LVTKQTGA+G C V+V E+ +E
Sbjct: 97 GKGKFVGTDISGVELAKSPERAKTLAEGMIGNVLVTKQTGASGLKCKEVLVAEKLNLAKE 156
Query: 491 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKI 670
Y++ M++RS + IA+ GG N+E+V+ ++P A+ I+ + GITDD++ ++ +
Sbjct: 157 RYISFMLDRSSCSIMAIATKHGGGNVEEVSEKDPSAVLTVKINPLKGITDDEVTKIATHL 216
Query: 671 GLQE-FATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ + +K MY F+ KDALL+E+NP +E + C D+K DDNA+F
Sbjct: 217 DFSKGLLEDTKSFVKNMYHAFVAKDALLLEINPLSETENSKLVAC-DSKVIIDDNADF 273
>UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;
n=1; Theileria annulata|Rep: Succinyl-coA ligase,
subunit, putative - Theileria annulata
Length = 433
Score = 161 bits (391), Expect = 2e-38
Identities = 84/238 (35%), Positives = 140/238 (58%), Gaps = 5/238 (2%)
Frame = +2
Query: 143 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNT----KDIVLKAQVLAGGR 310
R LNV EYI T+L+ +G+ VP+F A T +EA + + + ++V+KA VL GGR
Sbjct: 34 RWLNVSEYIGMTVLKRNGVRVPEFRSATTPEEAFEASKSIQQVTGKPELVIKALVLTGGR 93
Query: 311 GKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRRE 490
GKG F N GV +VN+PE A + A ML L TKQT G +C+ V++ ++ + E
Sbjct: 94 GKGVFSNTGFKGVEVVNSPESASECAKGMLGNYLTTKQTVGKGLLCSQVLLAQKLSLKNE 153
Query: 491 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKI 670
Y++ ++R G V IA+ GG N+E++A E PD++ + ++G+TD+ ++++++
Sbjct: 154 RYLSFTLDRGSGGIVAIATKHGGGNVEEIAHEYPDSVLTLSVSPLTGLTDENTEQLVKQL 213
Query: 671 GLQE-FATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
E + +K++Y+ F++ D L+EVNP E +G+ D+K DDNA++
Sbjct: 214 SFTENVRDQVVAAVKQIYNTFVQFDGTLLEVNPLVETD-SGEILACDSKLIVDDNAKY 270
>UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor; n=7; Trichomonas
vaginalis|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor - Trichomonas
vaginalis
Length = 407
Score = 160 bits (389), Expect = 3e-38
Identities = 92/241 (38%), Positives = 143/241 (59%), Gaps = 3/241 (1%)
Frame = +2
Query: 128 SKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGG 307
S R+ N+ E+ S + + + VA++ +EA + ++N V+KAQV GG
Sbjct: 3 SSSFARNFNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGG 62
Query: 308 RGKGTF-KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPR 484
RGKG + + G K GV V + + A IA +ML LVTKQTG G +C VM+++ +
Sbjct: 63 RGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVK 122
Query: 485 REYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIE 664
RE Y AI+++R PV+IAS++GGV IE+VAA +P+ I +D V GIT++ +
Sbjct: 123 RELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNIST 182
Query: 665 KIGLQEFATEAHGMI--KKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAE 838
K+GL A + +G++ +K++ LF+ DA +EVNP AE G+ +D+KF FDD+A
Sbjct: 183 KLGLTGKAYD-NGVVEMQKLWKLFVGSDATQVEVNPLAETT-DGRIITVDSKFNFDDSAH 240
Query: 839 F 841
+
Sbjct: 241 Y 241
>UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_53, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 429
Score = 155 bits (375), Expect = 2e-36
Identities = 90/246 (36%), Positives = 142/246 (57%), Gaps = 15/246 (6%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFA-------TELNT-KDIVLKAQVLAG 304
L++HEY + + +P+P + KT DEA K A +E N+ D+V+KAQ G
Sbjct: 12 LSLHEYQTAEFFKSFQLPIPPGKICKTPDEAYKAAIKIIQEGSERNSFTDLVVKAQCHTG 71
Query: 305 GRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFP 481
GRGKG FK NG G+ +V+ PE + A KML L+TKQTG+ G+ C MV V ER F
Sbjct: 72 GRGKGYFKENGFNSGIHIVSNPEDVKEYASKMLGNTLITKQTGSLGKKCEMVYVVERNFL 131
Query: 482 RREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD------D 643
R+E Y++I+++R+ G I+AS +GG++IE+ +P+ I I++ + + + +
Sbjct: 132 RKELYLSILLDRNTGGLGIVASEKGGIHIEE---SDPNYIKKFSIEMPNNVDEIDFSIYE 188
Query: 644 QICRVIEKIGLQEFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXF 823
+ +V + +Q + ++KKM+D+FL+ DA L+E+NP L G D K
Sbjct: 189 NVSKVYKLNPIQH--NQMKDILKKMFDIFLQTDATLLEINPLG-IDLQGNLIICDQKLNI 245
Query: 824 DDNAEF 841
DDN++F
Sbjct: 246 DDNSQF 251
>UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=1; Theileria parva|Rep:
ATP-specific succinyl-CoA synthetase beta subunit,
putative - Theileria parva
Length = 453
Score = 151 bits (367), Expect = 2e-35
Identities = 82/220 (37%), Positives = 126/220 (57%), Gaps = 5/220 (2%)
Frame = +2
Query: 131 KQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL----NTKDIVLKAQVL 298
K R LNV EYI T+L+ +G+ VP+F A T +EA + + NT ++V+KA VL
Sbjct: 24 KLSKRFLNVSEYIGMTILKRNGVRVPEFRNATTPEEAFEAGKSIQQLTNTPELVVKALVL 83
Query: 299 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 478
GGRGKGTF G KG V +V +P A ML L TKQT G +C V+V ++
Sbjct: 84 TGGRGKGTFNTGFKG-VEIVKSPSEVSACARGMLGNYLTTKQTVGKGLLCTEVLVAQKLS 142
Query: 479 PRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRV 658
+ E Y++ ++R G V IA+ GG N+E++A ++PDA+ I ++G+T + +
Sbjct: 143 IKSERYLSFTLDRGSGGIVAIATKHGGGNVEEIAHQHPDAVLTLQISPLTGLTPELTELL 202
Query: 659 IEKIGLQEFATE-AHGMIKKMYDLFLKKDALLIEVNPYAE 775
++++ TE ++++YD F+K D L+EVNP E
Sbjct: 203 VKQLSFSNEVTEQVKKTVQQLYDTFVKSDGTLLEVNPLVE 242
>UniRef50_Q01AE2 Cluster: Succinyl-CoA-ligase beta subunit; n=1;
Ostreococcus tauri|Rep: Succinyl-CoA-ligase beta subunit
- Ostreococcus tauri
Length = 203
Score = 147 bits (357), Expect = 3e-34
Identities = 77/180 (42%), Positives = 114/180 (63%)
Frame = +2
Query: 143 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT 322
RHLNVHEY ++ +G+ VP T D+ L +++V+K+Q+LAGGRG GT
Sbjct: 22 RHLNVHEYQGAEIMMKNGVRVPIGVACATLDDVDAACDALRGREVVVKSQILAGGRGLGT 81
Query: 323 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVA 502
F +G GGV +V E A A KML LVTKQ+G AG+ N++ V E+ RE Y A
Sbjct: 82 FASGFAGGVHVVAKTE-ARATAEKMLGGTLVTKQSGPAGKPVNVLYVAEKLKLTREMYFA 140
Query: 503 IMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQE 682
+M++R+ GP++IAS++GG +IED+AA P+ I +DIV G+T Q ++EK+G+++
Sbjct: 141 LMLDRASAGPLVIASAEGGTSIEDLAATQPEKIIKMRLDIVKGMTRPQADELVEKLGVKK 200
>UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=21;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 388
Score = 147 bits (357), Expect = 3e-34
Identities = 83/232 (35%), Positives = 134/232 (57%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + R G+ VP+ VA T +EA++ A EL+T+ V+KAQ+ AGGRGK
Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDTEIYVVKAQIHAGGRGKA--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++ + A ++L + LVT QTG G+ + + + ++EYYV +
Sbjct: 58 ----GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFV 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
++R+ + ++AS +GG IE+VAA+ P+ I E ID V G++ Q R+ I + +E
Sbjct: 114 IDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIPKES 173
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+A + +Y++F++KD ++E+NP G+ LDAK FDDNA F
Sbjct: 174 INKAAKFLISLYNVFIEKDCSIVEINPLVTTG-EGEVLALDAKINFDDNALF 224
>UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=155;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 399
Score = 145 bits (351), Expect = 1e-33
Identities = 83/235 (35%), Positives = 134/235 (57%), Gaps = 4/235 (1%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HE+ + +L + G PVP+ A T DEA A +L V+K+Q+ AGGRGKG F+
Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKLGGPVFVVKSQIHAGGRGKGKFE 60
Query: 329 N---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYV 499
KGGVR+V + E A +ML ++LVT QTG G+ N + + E +E+Y+
Sbjct: 61 GLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYL 120
Query: 500 AIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ 679
+++++R+ + ++AS++GG++IEDVA P+ I ID +G+ + + +GL
Sbjct: 121 SLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLT 180
Query: 680 -EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
A EA ++ ++Y F+ KD ++E+NP A LDAK FD N+ F
Sbjct: 181 GGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTA-DDHLRVLDAKLSFDGNSLF 234
>UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 398
Score = 140 bits (340), Expect = 3e-32
Identities = 86/230 (37%), Positives = 117/230 (50%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ ++EY R GIP P+ KT DE + A L +VLK+Q+ AGGRGK
Sbjct: 10 MKIYEYQVKEFFRSFGIPTPRGAAGKTSDEIVTAARSLGVMPVVLKSQIKAGGRGKA--- 66
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+R NT E AG A +L LVT QTG AG N +++ ER RE YV I+
Sbjct: 67 ----GGIRTANTLEEAGLQAIDLLGSRLVTAQTGPAGEQVNSLLLEERIDHERELYVGIL 122
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
++R P ++ S +GGV+IE + E P I E ID G+ Q RV +GL
Sbjct: 123 VDRETGRPALLVSGEGGVDIEKLGREAPGQILCESIDPAYGLRSFQASRVFLSLGLPSAS 182
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
A + +Y LF++ D +E+NP A +G+ LD K DDNA
Sbjct: 183 AARCAELSLSLYRLFMEMDCSDVEINPLA-LTTSGEPVALDGKVNVDDNA 231
>UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=14;
Campylobacter|Rep: Succinyl-CoA synthetase beta chain -
Campylobacter jejuni
Length = 387
Score = 140 bits (340), Expect = 3e-32
Identities = 87/230 (37%), Positives = 125/230 (54%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + + D+GIP K VA + DEA+ A EL +KAQ+ AGGRG G
Sbjct: 1 MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHAGGRGLG--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++ + D A K+L LVT QTG G++ + + +EYY+AI+
Sbjct: 58 ----GGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYLAIL 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
R IIASS+GG++IE VA E+P+ I ID G V +GL ++
Sbjct: 114 FNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLDKDE 173
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ MI K+Y L++ KD ++E+NP + A G F+ LDAK FDD+A
Sbjct: 174 GKKLISMIAKLYKLYMDKDMNMLEINPLIKTA-EGDFYALDAKCSFDDSA 222
>UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=34;
cellular organisms|Rep: Succinyl-CoA synthetase beta
chain - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 398
Score = 139 bits (337), Expect = 7e-32
Identities = 85/235 (36%), Positives = 128/235 (54%), Gaps = 4/235 (1%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + LL+ +G PV + + DEA A +L V+K+Q+ AGGRGKG FK
Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60
Query: 329 N---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYV 499
KGGVR+ + + A ML LVTKQTG AG+ N + + + RE Y+
Sbjct: 61 ELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 120
Query: 500 AIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ 679
+I+++RS + S++GG++IE VA P+ I ID G+T + + + + + L+
Sbjct: 121 SILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADALKLE 180
Query: 680 -EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
E +A + +Y F++KD L+EVNP G+ LDAK FD NA F
Sbjct: 181 GEARADAEKLFPILYKAFVEKDMSLLEVNPLI-VMTNGRMRVLDAKVSFDGNALF 234
>UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=64;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 388
Score = 138 bits (335), Expect = 1e-31
Identities = 82/232 (35%), Positives = 130/232 (56%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY +LR + +PVP+ A + +EA+K A L V+KAQ+ AGGRGKG
Sbjct: 1 MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHAGGRGKG--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++ + + A +L LVT QTG G+ N +++ E ++E YV+++
Sbjct: 58 ----GGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYVSLV 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFA 688
++R ++ASS+GG++IE+VAA P+ I +D G+ D + + KIG+ + +
Sbjct: 114 VDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPQIGLQDAEADDIARKIGVPDAS 173
Query: 689 T-EAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+A ++ +Y F + DA L E+NP G+ LDAKF FD NA F
Sbjct: 174 VPQARQALQGLYKAFWETDASLAEINPLILTG-DGKVIALDAKFNFDSNALF 224
>UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05557 protein - Schistosoma
japonicum (Blood fluke)
Length = 177
Score = 136 bits (329), Expect = 6e-31
Identities = 64/149 (42%), Positives = 94/149 (63%)
Frame = +2
Query: 395 MLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIED 574
ML + T QTG +G++CN ++ ERK+ RRE+Y+AI+++RS GPV++ QGGVNIED
Sbjct: 1 MLGHRIFTAQTGDSGQLCNTLLACERKYSRREHYLAIVLDRSSGGPVMVGCKQGGVNIED 60
Query: 575 VAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFATEAHGMIKKMYDLFLKKDALLI 754
+A +NPDA+ PIDI G+ + K+G + EA I+++Y LF D L+
Sbjct: 61 IARDNPDALIKIPIDIDKGLDKKDAVMMAHKLGFSH-SDEAAVYIERLYKLFDSTDCTLL 119
Query: 755 EVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
E+NP ++ + G C+D K FDDNA F
Sbjct: 120 EINPISQD-INGHVICMDCKMNFDDNAAF 147
>UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=76;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Bacillus subtilis
Length = 385
Score = 135 bits (326), Expect = 2e-30
Identities = 77/230 (33%), Positives = 128/230 (55%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY +LR +G+ VP+ VA T +EA++ A L++ V+KAQ+ AGGRGK
Sbjct: 1 MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQIHAGGRGKA--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++ + + A ++L + LVT QTG G++ +++ E ++EYY+ ++
Sbjct: 58 ----GGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYIGLV 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
++R+ + V++AS +GG IE+VA + P+ I ID G+ Q + I + +E
Sbjct: 114 LDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIPKEL 173
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+A + +Y F++KD + E+NP G LDAK FD NA
Sbjct: 174 VGKAAKFMLGLYKAFVEKDCSIAEINPLVVTG-DGNVMALDAKLNFDSNA 222
>UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase
(ADP-forming) beta chain; n=1; Candidatus Protochlamydia
amoebophila UWE25|Rep: Probable succinate-CoA ligase
(ADP-forming) beta chain - Protochlamydia amoebophila
(strain UWE25)
Length = 389
Score = 134 bits (323), Expect = 3e-30
Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N HE+ + +LR +GIPVP F +A + E + + + ++K QV AGGRGK
Sbjct: 1 MNTHEFQAKQILRKYGIPVPDFYIASSSKEVEEIIKQYQLQSAIIKVQVHAGGRGKA--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++ P+ + + +++ + ++ +QTG +G I + V+++ ++E+Y+ I
Sbjct: 58 ----GGVKLATNPQEILEFSQELIGKKIINEQTGPSGMISHQVLISPAILIKKEFYLGIT 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
+ R V+IAS GGVNIE +A E P+ + PI + + R+ +G + +
Sbjct: 114 INRELASRVLIASPIGGVNIEKIAHEQPNQLLMLPIPLEETFRSYHLIRIASFMGWKGKQ 173
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
E +I+ + F + DA L+E+NP E G LDAK DDNA F
Sbjct: 174 IQEGVAIIQSLVKAFKETDASLLEINPLVETK-EGHLLALDAKLSIDDNALF 224
>UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhodopirellula baltica
Length = 394
Score = 134 bits (323), Expect = 3e-30
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 2/233 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT-F 325
+ +HEY L R G+PV ++ T DEA +L K V+KAQ+ AGGRGKG
Sbjct: 1 MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVI 60
Query: 326 KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAI 505
N + GV +V + E A A +L + LVT QTG G+ + V V RE Y+ I
Sbjct: 61 DNPDQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYLGI 120
Query: 506 MMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEF 685
+++R+ + PV++ S++GGV IE VA E P+ I E D G+ Q+ ++ +K+G++
Sbjct: 121 VVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQVRKLCKKLGIEGA 180
Query: 686 ATE-AHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
A + A+ + M F+ D + E+NP G+ LDAK FD+NA F
Sbjct: 181 AAKSAYKFMTAMCRFFVDFDCEMAEINPLVITG-DGEMVALDAKIIFDENAMF 232
>UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=80;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhizobium loti (Mesorhizobium loti)
Length = 397
Score = 132 bits (320), Expect = 8e-30
Identities = 84/235 (35%), Positives = 124/235 (52%), Gaps = 4/235 (1%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY LL+ G PV + EA A L V+K+Q+ AGGRGKG FK
Sbjct: 1 MNIHEYQGKALLKSFGAPVAEGVPVFKASEAEAAARALPGPLYVVKSQIHAGGRGKGKFK 60
Query: 329 N---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYV 499
KGGVR+ + A +ML LVTKQTG AG+ N + + + RE Y+
Sbjct: 61 ELSPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQVNRLYIEDGADIERELYL 120
Query: 500 AIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ 679
+I+++RS + S++GG++IE VA + P+ + ID G+T D + ++ + L
Sbjct: 121 SILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKVITVAIDPERGVTADDVKKLNAALKLD 180
Query: 680 EFATEAHG-MIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
A + G + +Y F++KD L+EVNP G+ LDAK FD+NA F
Sbjct: 181 GDAAKDGGTLFPILYKAFIEKDMSLLEVNPLI-VMKNGRLRVLDAKVSFDNNALF 234
>UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=29;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 397
Score = 131 bits (316), Expect = 2e-29
Identities = 82/235 (34%), Positives = 123/235 (52%), Gaps = 4/235 (1%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + LL+ +G PV + +EA A +L V+K+Q+ AGGRGKG FK
Sbjct: 1 MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60
Query: 329 N---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYV 499
KGGVR+ + E + ML LVT QTG AG+ N + + + RE Y
Sbjct: 61 ELGPDAKGGVRLAKSIEEVVSHSRDMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120
Query: 500 AIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ 679
+++++RS + S++GG++IE VA + P+ I I+ G++D + + + + L
Sbjct: 121 SLLVDRSVGQVAFVVSTEGGMDIEAVAHDTPEKIHTIAINPEKGVSDADVAAISKALELD 180
Query: 680 EFATE-AHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
A E A + +Y F +KD L+EVNP G LDAK FD NA F
Sbjct: 181 GVAAEDAKALFPILYKAFNEKDMALLEVNPLIVME-NGHLRVLDAKMSFDGNALF 234
>UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=2; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter propionicus (strain DSM 2379)
Length = 394
Score = 128 bits (309), Expect = 2e-28
Identities = 82/230 (35%), Positives = 119/230 (51%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HEY + +L GI +P+ VA + + A EL V+KAQV AGGRGKG
Sbjct: 1 MKIHEYQAKDILAGFGIAIPRGRVAMNASQVERAARELGGH-CVIKAQVYAGGRGKG--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+R+ P AG+IA ++L LVT QTG G ++V E RE Y++I
Sbjct: 57 ----GGIRVAQDPGQAGEIAKELLGTKLVTPQTGPEGLEVRRLLVEEVVDIERELYLSIT 112
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
++R + +IAS++GG++IE++A PD I ID G+ Q R +GL
Sbjct: 113 LDRESSRYCLIASAEGGMDIEEIARTAPDRIRILTIDPFIGLRSYQARRTALGLGLVGPL 172
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
E +I +Y L++D L+E+NP G +D K FDDNA
Sbjct: 173 CEECVELILNLYRCLLERDCSLVEINPLV-VTNAGWLVAMDTKMTFDDNA 221
>UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n=3;
Archaeoglobus fulgidus|Rep: Succinyl-CoA synthetase beta
chain 1 - Archaeoglobus fulgidus
Length = 382
Score = 124 bits (299), Expect = 3e-27
Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HE+ + + HGI VP+ VA + +EA K A +L + +V+KAQ+L GGRGK
Sbjct: 1 MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKLGGR-VVVKAQILVGGRGKA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV+ N+PE A ++A K+L + G V+V E+ R+EYYV +
Sbjct: 57 ----GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYVGYV 105
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
+++S P +I S GG+++E++AA++PDAI D + G+ D ++ + + + G + E
Sbjct: 106 VDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRAGFEGEE 165
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ +IKK+ D+ +A L E+NP A F DA+ DDNA
Sbjct: 166 FKQMFDIIKKLVDIAFAYEAELTEINPLA--VTDEGFLAADARLNTDDNA 213
>UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit,
putative; n=5; Trichocomaceae|Rep: Succinyl-CoA
synthetase beta subunit, putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 407
Score = 123 bits (297), Expect = 5e-27
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 2/215 (0%)
Frame = +2
Query: 203 VPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGD 382
VP+ V +A + + VLK+Q+LAGGRGKG + KGG+R+V TPE A
Sbjct: 36 VPRGYVVTNPGDAEAVVSSIGAPS-VLKSQILAGGRGKGKMSSDGKGGIRIVATPEQAFQ 94
Query: 383 IAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGV 562
A +ML L T+QT G + + + + +E+Y+A+ +R PVI+ S QGGV
Sbjct: 95 NASRMLGHYLATQQTPPHGLLVKKLYIYKAVDVEQEFYLALTFDRERYSPVILISDQGGV 154
Query: 563 NIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL--QEFATEAHGMIKKMYDLFLK 736
NIE N D + ++ GIT + + + ++ +E T +I++M LF +
Sbjct: 155 NIE----SNQDKLHRFWFNLSRGITGETMAGIQKQSCFTDKEMPT-IESIIRQMIKLFEE 209
Query: 737 KDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+DA+L+E+NP G F CLDAKF FD+ A+F
Sbjct: 210 RDAILLELNPLVRTP-EGSFVCLDAKFEFDNAAQF 243
>UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1)
Length = 388
Score = 121 bits (291), Expect = 3e-26
Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HEY + L +GIP+P+ +A++ +E + A + +V KAQ+ AGGRGK
Sbjct: 1 MKLHEYQAKQLFHRYGIPIPEGRLARSVEETGQAARAFAGRCVV-KAQIHAGGRGKA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV VN+ + A +IA ++L+ LVT QTG G ++V E RE Y+++
Sbjct: 57 ----GGVARVNSVDQARNIAQRLLQHTLVTAQTGDQGLYVGSLLVEEIVPVAREMYLSLT 112
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
++R+ +IAS GGV+IE A + P+ + ID + G+ + +GL
Sbjct: 113 LDRANGRYCLIASPDGGVDIEQTARKTPERVRRLTIDPLVGLRAFHARDIARFLGLDGPL 172
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ A +I +Y L+KDA L+E+NP A G+ +DAK DD+A F
Sbjct: 173 SAAASKVILSLYRCLLEKDASLVEINPLAVTE-EGRLMAMDAKVSIDDSALF 223
>UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=99;
Proteobacteria|Rep: Succinyl-CoA synthetase beta chain -
Shigella flexneri
Length = 388
Score = 118 bits (284), Expect = 2e-25
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + L +G+P P T EA + A+++ V+K QV AGGRGK
Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++VN+ E A L + LVT QT A G+ N ++V +E Y+ +
Sbjct: 58 ----GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAV 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
++RS V +AS++GGV IE VA E P I +D ++G Q + K+GL+ +
Sbjct: 114 VDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKL 173
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ + + +FL++D LIE+NP G CLD K D NA F
Sbjct: 174 VQQFTKIFMGLATIFLERDLALIEINPLV-ITKQGDLICLDGKLGADGNALF 224
>UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Roseovarius|Rep: Succinyl-CoA synthetase beta subunit -
Roseovarius sp. 217
Length = 391
Score = 117 bits (281), Expect = 4e-25
Identities = 75/227 (33%), Positives = 110/227 (48%)
Frame = +2
Query: 161 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 340
EY S LL +G+ VP+ A+T DEA + E++ + V+KAQ+ AGGRG L
Sbjct: 5 EYQSKELLAQYGVHVPEGRPARTPDEAQRLCKEIDARKYVVKAQIGAGGRG-------LA 57
Query: 341 GGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERS 520
GG+R TP D A ++L LVT QTG AG +V + + +VAI ++
Sbjct: 58 GGIRFAATPSAVADEARRLLGSTLVTDQTGPAGETVTLVQIEAAIDIAQSCFVAIALDPE 117
Query: 521 FNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFATEAH 700
P+++AS GGV E A + D P+ S + + + +G+ E A
Sbjct: 118 TGQPMLLASGAGGVEFEQRARMDEDTAQSCPLPPDSPESRTALATFLSGVGMTEAQEAAI 177
Query: 701 GMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
I F + D LIE+NP+A G++ +DAK D NA F
Sbjct: 178 TAIFAARLAFTENDMTLIEINPFARTG-DGRWMAVDAKVAIDPNAGF 223
>UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chain;
n=5; Escherichia coli|Rep: SucC, succinyl-CoA synthetase
beta chain - Escherichia coli (strain UTI89 / UPEC)
Length = 389
Score = 116 bits (279), Expect = 7e-25
Identities = 81/235 (34%), Positives = 124/235 (52%), Gaps = 6/235 (2%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATE---LNTKDIVLKAQVLAGGRGKG 319
+N+HEY + +LL G+P PK +A + + A + +K VLKAQV AGGRGK
Sbjct: 1 MNLHEYQAKSLLAGMGMPCPK-EIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA 59
Query: 320 TFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFP-RREYY 496
GGV+++ A +ML LVT QTG G+ + +++ E +P R+E Y
Sbjct: 60 -------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQELY 112
Query: 497 VAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL 676
++++R I S +GGV IE VA E P+ I+ ID ++G+ I + + L
Sbjct: 113 FGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVLQL 172
Query: 677 QE--FATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ FAT + ++ + + F + D L+E+NP TG+F C DAK DDNA
Sbjct: 173 EHGLFATFSR-LVNQAWKAFNELDFALLEINPLV-LRETGEFMCADAKVSLDDNA 225
>UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7;
Chlamydiaceae|Rep: Succinyl-CoA synthetase beta chain -
Chlamydophila caviae
Length = 388
Score = 116 bits (278), Expect = 1e-24
Identities = 74/230 (32%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+++HEY + LL + I +P + VA + +E + EL V+K QV AGGRGK
Sbjct: 1 MHLHEYQAKDLLVSYDIAIPPYRVASSVEEGQQALKELAIDAGVVKVQVHAGGRGKN--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV + +P K+L+ V+ QT V++T EYY+A++
Sbjct: 58 ----GGVVVAKSPSDILAAVDKLLRMRFVSNQTSGEALPVEKVLITPLVNIAAEYYLAVI 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
M+R P I+ S GGV+IE+VA + PD + P+ + + + QI ++I+ + + +
Sbjct: 114 MDRKNRCPAIMLSKAGGVDIEEVAQKYPDQLLTVPLTPFARLYNYQIRQIIKFMNWEGDI 173
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ +IKK+ F DA L+E+NP G LDAK DDNA
Sbjct: 174 RKQGAQLIKKLVQCFYDNDASLLEINPLV-LTQEGDLLVLDAKITIDDNA 222
>UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=16;
Gammaproteobacteria|Rep: Succinyl-CoA synthetase beta
chain - Haemophilus influenzae
Length = 389
Score = 115 bits (277), Expect = 1e-24
Identities = 80/232 (34%), Positives = 116/232 (50%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + L +G+PV V ++ ++ +L+ K QV AGGRGK
Sbjct: 1 MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGGKWAAKCQVHAGGRGKA--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++V E A A K L Q LVT QT G+ N + E +E+Y++ +
Sbjct: 58 ----GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAV 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFA 688
++R+ V IASS+GG+NIE+V +P + ID + G Q + K+GL
Sbjct: 114 VDRTSQKVVFIASSEGGMNIEEVVQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLSGTQ 173
Query: 689 TEAH-GMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ + + LFL+KD L+EVNP G CLDAK DDNA F
Sbjct: 174 NKQFTDIFMGLSRLFLEKDLSLLEVNPLV-LTPQGNLVCLDAKISVDDNALF 224
>UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta
chain; n=1; Desulfotalea psychrophila|Rep: Probable
succinyl-CoA synthetase, beta chain - Desulfotalea
psychrophila
Length = 386
Score = 114 bits (275), Expect = 2e-24
Identities = 81/232 (34%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HEY + L R + IPVP+ + T + +K A + I +KAQ+ AGGRGKG
Sbjct: 1 MKIHEYQAKQLFRKYSIPVPE-GLLCTNLQEVKTALKSLQLPIAVKAQIHAGGRGKG--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++ T A +L LVT QTG +GR + +++ E RE Y++I+
Sbjct: 57 ----GGVKLGKTATEVVQYADDILGMSLVTAQTGPSGRTVSKILLEEGVSIARELYLSIL 112
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
++R IIA GG+NIE+VAA P+ I I+ + G I + E + + QE
Sbjct: 113 VDRERACITIIACQDGGMNIEEVAASTPERIGKIHINPLIGPRSYHINQAREWLNIAQEQ 172
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
A I +Y LFL D ++E+NP Q LDAK D NA F
Sbjct: 173 ARAFSLFIHALYKLFLDYDCSMVEINPLI-ITEDNQLIALDAKVDTDSNALF 223
>UniRef50_Q8D2D7 Cluster: SucC protein; n=4;
Gammaproteobacteria|Rep: SucC protein - Wigglesworthia
glossinidia brevipalpis
Length = 396
Score = 114 bits (274), Expect = 3e-24
Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + L + IP+PK K DE K + L+T V+K Q+ AGGRGK
Sbjct: 1 MNLHEYQAKKLFNKYEIPIPKGYCIKELDEIEKTISNLSTGPWVIKCQIHAGGRGKS--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+++ N+ + + A K L L+T QT G+ N +++ ++ ++E Y++ +
Sbjct: 58 ----GGIKITNSKKEIHEFAKKWLGNKLITYQTDKNGQKVNYLLIEKKTIIKKELYLSFV 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
+ R + ++I+S GGV+IE++ + + I E ++ I D Q ++ K+GLQ
Sbjct: 114 INRKKSSIMLISSDSGGVDIENIFKKKSNNIYKEILESCYLIQDFQSRKIAFKLGLQGNQ 173
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ + K+ LFL+ D +E+NP CLD K DDNA
Sbjct: 174 INQFVKICNKLSLLFLENDLTTLEINPIVIDD-KNNLICLDGKIIIDDNA 222
>UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=47;
Actinobacteria (class)|Rep: Succinyl-CoA synthetase beta
chain - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 398
Score = 113 bits (273), Expect = 4e-24
Identities = 76/232 (32%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+++ EY + L HG+PV K VA T + A K A E+ +V KAQV GGRGK
Sbjct: 1 MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGGLTVV-KAQVKVGGRGKA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGVR+ T A D A +L + G N VMV + EYY +I+
Sbjct: 57 ----GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFSIL 105
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
++R+ + + S +GG+ IE +A E P+A+ +D ++GI +D+ ++ G + E
Sbjct: 106 LDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFETEV 165
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
A + ++ K++ ++ +++A L+EVNP G LD K DDNA+F
Sbjct: 166 AEKVIPVLIKIWQVYYEEEATLVEVNPLV-LTDDGDVIALDGKITLDDNADF 216
>UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8;
Thermoprotei|Rep: Succinyl-CoA synthetase beta chain -
Pyrobaculum aerophilum
Length = 382
Score = 112 bits (269), Expect = 1e-23
Identities = 70/234 (29%), Positives = 125/234 (53%), Gaps = 3/234 (1%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HEY + L +G+ +P VA T +E +K A E+ +VLKAQV+ GRGK
Sbjct: 1 MKLHEYEAKELFSKYGVKIPPGKVALTPEEVLKIAREIGAP-VVLKAQVVVAGRGKA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+++ N+PE A +++ +M G I + VT+ RE Y++++
Sbjct: 57 ----GGIKVANSPEEAYELSKRMFGM-------NIKGLIVKKLYVTKFVEVEREMYLSLI 105
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFA 688
++R+ + +AS GG++IE++A +P+ I +D +G+ D + ++ +G ++
Sbjct: 106 IDRASRRYLFLASPVGGMDIEEIAKTSPEKIKRVYVDPATGLRDYHVRSIVSWLGFKQGT 165
Query: 689 T---EAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ +A +++ MY + + DA L+E NP A G+ LDA+ DDNA F
Sbjct: 166 SQWQQAASIVQAMYRIMVDYDAELVESNPLA-VTKEGEVIPLDARVIVDDNALF 218
>UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Deinococcus radiodurans
Length = 386
Score = 109 bits (262), Expect = 9e-23
Identities = 79/234 (33%), Positives = 117/234 (50%), Gaps = 3/234 (1%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGK-GTF 325
+ +HEY +LRD G+ V VA T +E E + +V+KAQV GGRGK G
Sbjct: 1 MKLHEYQGKEVLRDFGVNVQDGKVATTPEEVQAIYKEYG-QPVVVKAQVHVGGRGKAGGV 59
Query: 326 KNGLKGGVRMVNTPEVAG-DIAGKMLKQLLVTKQTGA-AGRICNMVMVTERKFPRREYYV 499
K + N + G DI G + ++LVTK AG EYYV
Sbjct: 60 KYSANEDKALENAKNILGMDIKGLTVNKVLVTKAVDIDAGT---------------EYYV 104
Query: 500 AIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ 679
++++R+ ++AS++GG+ IE+VAA NP+ I +D V+G+ + V K G +
Sbjct: 105 GMIVDRNVQSYTLMASAEGGMEIEEVAATNPEKIIRHRVDPVTGLRPYEAREVAIKAGFR 164
Query: 680 EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ M+ KM L++DA+L+E+NP A G LD KF DDNA +
Sbjct: 165 GNLNKIADMMVKMSKAALERDAVLVEINPLFVDA-DGTPIALDTKFEIDDNAMY 217
>UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Symbiobacterium thermophilum|Rep: Succinyl-CoA
synthetase beta subunit - Symbiobacterium thermophilum
Length = 373
Score = 107 bits (257), Expect = 3e-22
Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ ++EY++ + +HG+P + T +EA + A ++ +KAQVL GGRGK
Sbjct: 1 MKLYEYLAKQMFAEHGVPTGNGILCTTPEEAEEAARKIGP--CAIKAQVLVGGRGKA--- 55
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+++ NTPE A + A ++L L G I + V+V + +EYYV+I
Sbjct: 56 ----GGIKLANTPEEARERAREILGMNL-------KGYIVDKVLVDPQIKIEKEYYVSIT 104
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
++ P+++AS GGV IE V D I +E IDI +G+ Q + KI L +
Sbjct: 105 LDGMAKKPLVMASEYGGVEIESVP---HDKIVFEHIDIETGLLPFQAREIARKINLTGDL 161
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
A + ++ +Y F K DA L+E+NP A + D +F +D+A F
Sbjct: 162 ADQFVRILTGLYQAFRKYDAELVEINPLALTDGGTRLIAADGRFNVEDDALF 213
>UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Candidatus Vesicomyosocius okutanii HA|Rep: Succinyl-CoA
synthetase beta subunit - Vesicomyosocius okutanii
subsp. Calyptogena okutanii (strain HA)
Length = 386
Score = 107 bits (256), Expect = 5e-22
Identities = 66/230 (28%), Positives = 119/230 (51%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+++HEY + TL I PK + + D+A L V+KAQ+ AGGRGKG
Sbjct: 1 MHIHEYQAKTLFNHKHIQTPKGILIYSVDQASDACKTLGGSIWVVKAQIHAGGRGKG--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+ + + E + ++L L+T QT A G + +++ + E+Y+ ++
Sbjct: 58 ----GGIILCRSIEEVKNACSQLLNSQLITPQTYAKGLPVSQLLIEIGENITHEFYLGLL 113
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
++R ++AS++GG++IE VA + P+ I I+ + ++ + +K+ L +F
Sbjct: 114 IDRQTKKITVLASTKGGMDIEKVARKTPNQIIKFGINPLGHLSVQDCAFMAKKLDLHFKF 173
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ + ++ +Y++F +KD LIE+NP + LD K FDDNA
Sbjct: 174 TKQFNNILLGLYEIFTQKDVNLIEINPLV-ITKENKLLALDGKIDFDDNA 222
>UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5;
Bacteroides|Rep: Succinyl-CoA synthetase beta chain -
Bacteroides fragilis
Length = 382
Score = 104 bits (250), Expect = 2e-21
Identities = 69/230 (30%), Positives = 113/230 (49%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ VHEY + + +GIPV + + T D A+ + + +KAQVL GGRGK
Sbjct: 1 MKVHEYQAKEIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKA--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++ N A +L+ + G ++++E EYY++
Sbjct: 58 ----GGVKLANNDRDVYQYAQTILEMTI-------KGYPVTKILLSEAVNIAAEYYISFT 106
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
++R+ +I S+ GG++IE+VA ++P+ I ID + G+ D + + Q E
Sbjct: 107 IDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPDYLAHKFAFSLFEQAEQ 166
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
A +I+ +Y F++KDA L E+NP + G +DAK FDDNA
Sbjct: 167 ANRMATIIQDLYKAFIEKDASLAEINPLVLTPV-GTLLAIDAKMVFDDNA 215
>UniRef50_Q5T9Q8 Cluster: Succinate-CoA ligase, ADP-forming, beta
subunit; n=3; Eutheria|Rep: Succinate-CoA ligase,
ADP-forming, beta subunit - Homo sapiens (Human)
Length = 154
Score = 103 bits (248), Expect = 4e-21
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +2
Query: 527 GPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFATE--AH 700
GPV+I SS GGVNIEDVAAE+P+AI EPIDI GI +Q ++ +K+G E A
Sbjct: 31 GPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAE 90
Query: 701 GMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
M+ K+Y LFLK DA +IE+NP E + G C+DAK FD N+ +
Sbjct: 91 NMV-KLYSLFLKYDATMIEINPMVEDS-DGAVLCMDAKINFDSNSAY 135
>UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Halobacteriaceae|Rep: Succinyl-CoA synthetase beta chain
- Halobacterium salinarium (Halobacterium halobium)
Length = 382
Score = 103 bits (246), Expect = 7e-21
Identities = 74/232 (31%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HEY + + D GIP P+ +A + DEA++ A L+ + +KAQV GGRGK
Sbjct: 1 MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALDYP-VAVKAQVHVGGRGKA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
G+K E A I G LK G + V+V E E YV +
Sbjct: 57 GGIKLAENTAEAREAAESILGMDLK-----------GYTVDRVLVEEAVDFTNELYVGVT 105
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
M+RS PV++ S +GGV+IE VA E P+ I E +D G+ Q + G+ Q+
Sbjct: 106 MDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIEQDV 165
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
A + +++ +YDL+ DA +E+NP + DA D++A F
Sbjct: 166 AGDVAKIVQGVYDLWADSDATEVEINPVMVTS-ERDVVAADAVMKLDEDALF 216
>UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Euryarchaeota|Rep: Succinyl-CoA synthetase beta chain -
Methanococcus jannaschii
Length = 364
Score = 102 bits (244), Expect = 1e-20
Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 3/234 (1%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HEY + + + +GIPVP+ + +D+ + K++VLKAQVL GGRGK
Sbjct: 1 MKLHEYEAKNIFKKYGIPVPESFLVSKEDDLNSINVD---KEVVLKAQVLVGGRGKA--- 54
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+ + E + +K+ G ++V E+ +EYYV+I+
Sbjct: 55 ----GGILFASNKE-------EFIKKAEELFNKEVKGEKVEKILVEEKLPIEKEYYVSII 103
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVI---EKIGLQ 679
++R P+II S++GGV+IE+VA +NP+ I ID+ I R I K+
Sbjct: 104 IDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFL-PYIARWIVKEAKLPSN 162
Query: 680 EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
E A +I K+Y +F + DA ++E+NP G + DA DD+A F
Sbjct: 163 EIGKVA-DVIYKLYKIFKELDATMVEINPLV-ITKDGNVYAADAVLHLDDDAAF 214
>UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Archaea|Rep: Succinyl-CoA synthetase beta subunit -
Methanopyrus kandleri
Length = 359
Score = 97.9 bits (233), Expect = 3e-19
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Frame = +2
Query: 161 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 340
EY + LL++ G+P+P+ +VA+T +A + A EL + +KAQV G RGK
Sbjct: 6 EYQAKHLLKEAGVPIPEGDVARTSADAARIAAELGGP-VAVKAQVPVGARGKA------- 57
Query: 341 GGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERS 520
GG+ + PE A A K+L + G V+V E+ E+YV+I ++R+
Sbjct: 58 GGILFADDPEGARKAARKLLGSRI-------RGETVRKVLVEEKLDIAEEWYVSITLDRA 110
Query: 521 FNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEFATEA 697
PV++ S +GGV+IE+V E I +D + G+ + I + G+ +E +
Sbjct: 111 KRRPVLLVSREGGVDIEEVPDEK---IARRYLDPILGLRPFEAREAILEAGIPKEHLRDV 167
Query: 698 HGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+I MY++F DA L+E+NP G+ DA D++A
Sbjct: 168 EEVITSMYEVFESYDAHLVEINPLV-LTENGEVVAADAVVNLDEDA 212
>UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit
family protein; n=2; cellular organisms|Rep:
Succinyl-CoA synthetase, beta subunit family protein -
Tetrahymena thermophila SB210
Length = 534
Score = 97.5 bits (232), Expect = 4e-19
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 50/279 (17%)
Frame = +2
Query: 155 VHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL-NTK-----------DIVLKAQVL 298
+HEY LL+ + +PV +VA + ++A+ A +L N+K D V+KAQ+
Sbjct: 82 LHEYQVMDLLQKYDLPVISGSVATSAEQALNVAQQLKNSKPTNQSQGITFTDFVVKAQIH 141
Query: 299 AGGRGKGTFK-NGLKGGVRMVNTPEVAGDIA----------------GKMLKQLLVTKQT 427
AGGRGKG FK NG++ GV+ +P+ DIA G+ + +LV ++T
Sbjct: 142 AGGRGKGFFKENGMQSGVQFATSPQEVKDIAEKMLGKTLITKQTGLRGRSVNSVLVVERT 201
Query: 428 GAAGRIC--NMVM---VTERKFPRR---------------EYYVAIMMERSFNGPVIIAS 547
IC N ++ + + KF R+ E Y+AI ++R G VII +
Sbjct: 202 FLRKVICFRNRIVYLFIPQYKFMRKWQQCVRLMFLNKQKQELYLAITLDRKQGGVVIICN 261
Query: 548 SQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEFATEAHGMIKKMYD 724
+GGVNIE ++ ++ +++ G+T + + + + L ++ + H ++K +Y
Sbjct: 262 ERGGVNIEQ---QDESSVKTHFVNVHEGLTQQTLDDISKSLNLGSQYNDQLHKIVKGLYK 318
Query: 725 LFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
F + D+ L+E+NP + G+ D K DDNA +
Sbjct: 319 CFSETDSTLLEINPLG-LTIDGKLLICDQKMNVDDNAAY 356
>UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 380
Score = 96.7 bits (230), Expect = 6e-19
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 2/231 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HEY + + +GIPVP+ VA T EA++ A E+ ++LKAQVL GGRG
Sbjct: 1 MRLHEYEALDIFERNGIPVPRRGVASTMHEALRVAGEIGYP-VILKAQVLVGGRG----- 54
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
L GG++ ++P+ ++A +L + G ++V E+ +E YV I
Sbjct: 55 --LAGGIKTASSPDELKEVAEALLS-------SDVKGLPVLKLLVCEKVEVAKELYVGIT 105
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKI-GL-QE 682
++ PVI+AS++GG+ IE+ A +P+ I +D Q ++ ++ G+ Q+
Sbjct: 106 IDGYSGKPVIVASTEGGMLIEETARTSPEKIAAIHVDSSLEFYPYQARTMLGRLSGINQQ 165
Query: 683 FATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
T +I ++Y++ ++ + L+ E+NP G +DA DD+A
Sbjct: 166 LLTSWTDVIGQLYNVVMRYEPLICEINPLVVLP-NGGLIAVDAVLEVDDSA 215
>UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n=6;
Thermoplasmatales|Rep: Succinyl-CoA synthetase beta
subunit - Thermoplasma volcanium
Length = 384
Score = 96.7 bits (230), Expect = 6e-19
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
LN++EY+ + R++GIPVP V + + KF T + +K+Q+L GGRGK
Sbjct: 20 LNLYEYMGKDIFREYGIPVPNGYVVSSPQDVKKF-----TNPVAVKSQILLGGRGKA--- 71
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG++ T E + +L T V++ + + EYYV+I
Sbjct: 72 ----GGIKFAKTDEELKNAVSTLLS-------TKVRNMTVTKVLIEDMLNIKHEYYVSIA 120
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
+ R+ P++IAS+ GG+ IE+V D I ID G +D + +GL E
Sbjct: 121 LNRAAKSPMLIASAMGGMEIENVP---DDKIFKRIIDPSLGYSDFIGREASQFMGLPPEL 177
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ + ++KK+Y+++ +D L+E+NP E G+ DAK D +A
Sbjct: 178 SKQFLDILKKLYNVYRGEDCELVEINPLVETG-DGKLIAADAKVVIDSDA 226
>UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 372
Score = 94.3 bits (224), Expect = 3e-18
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ + EY + L + GIP+P+ N + A E VLKAQVL GGRGK
Sbjct: 1 MKLFEYQAKELFAESGIPIPQ-NALIGDISELNSALEKIGLPCVLKAQVLQGGRGKA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
G V+ V T E A A ++L+ A G+ ++V E RE YV+I
Sbjct: 57 ----GLVKFVRTKEEAQKEAERILE---------ATGK---KLLVEEAVPYEREMYVSIT 100
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEF 685
++ + +++A +GGV+IE +A P+ I E +D+ G+ Q ++ +GL Q
Sbjct: 101 VDAASGLAMVMACLEGGVDIEQIARTTPEKIIKEKVDMSLGLMAYQADNIMYGLGLEQSA 160
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
A E ++ K+Y LF+K +A L+E+NP G D KF DDNA
Sbjct: 161 AKEGSKILLKLYQLFVKYNAELVEINPLM-ILRDGTMAAADGKFNLDDNA 209
>UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Succinyl-CoA
synthetase, beta subunit - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 383
Score = 92.3 bits (219), Expect = 1e-17
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
++++E+ LL G+ VA T +EA + A L + +KAQVL GGRGK
Sbjct: 1 MDLYEHQGKELLGRFGLRTLPGVVATTPEEARRAAERLGGT-VAVKAQVLTGGRGKA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+++ +PE A + A ++L + G +++ RE Y++ M
Sbjct: 57 ----GGIKVAESPEEAEEAARRILGMDI-------RGHTVRRLLIESGADIERELYLSAM 105
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EF 685
++R P+I+ S++GGV+IE+VA +P +I +D + G+ Q+ + GL E
Sbjct: 106 VDRESRRPLILFSTEGGVDIEEVAERSPGSIVRLHVDPLVGLLPYQVRELTFASGLSGET 165
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
A + ++ +Y+ F DA L+E+NP G+ LDAK D+++
Sbjct: 166 AKDFGRAVQNLYEAFRGIDASLVEINPLVVTG-EGEVVALDAKVTVDNSS 214
>UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2;
Candidatus Blochmannia|Rep: Succinyl-CoA synthetase beta
chain - Blochmannia floridanus
Length = 399
Score = 90.2 bits (214), Expect = 6e-17
Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 6/237 (2%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDI--VLKAQVLAGGRGKGT 322
+N++EY + L + IP+ K ++ E +E+ + ++K Q+ +GGRGK
Sbjct: 1 MNLYEYQAKQLFKQFNIPILKNHIITETSEIKDCISEIIKEGPPWIVKCQIRSGGRGKS- 59
Query: 323 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVA 502
GGV++VN+ E A + + LVT QT G N +++ E+Y++
Sbjct: 60 ------GGVQIVNSMEDMLAFANRWFGKNLVTYQTTVDGERVNSILIEPAVNIAHEFYLS 113
Query: 503 IMMERSFNGPVIIASSQGGVNIEDVAAEN---PDAITYEPIDIVSGITDDQICRVIEKIG 673
I+++R + + I S++GGV+IE+V E+ D I ID + G Q + K+
Sbjct: 114 ILIDRDLSNIICIVSTKGGVDIENVIHESVSTSDVIYKISIDPLIGACAYQGRLLASKLS 173
Query: 674 LQ-EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
L + M + +F++KD LIE+NP CLDAK D NA F
Sbjct: 174 LSGTQINQFTDMYINLVRMFIEKDLTLIEINPLI-INKNNDLLCLDAKVSIDRNALF 229
>UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n=4;
Peptococcaceae|Rep: Succinyl-CoA synthetase beta subunit
- Pelotomaculum thermopropionicum
Length = 369
Score = 90.2 bits (214), Expect = 6e-17
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 5/232 (2%)
Frame = +2
Query: 161 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 340
EY+ L +G+PVPK +A DEA K A E+ V+K+QVL G RGK
Sbjct: 3 EYMGKELFAKYGLPVPKGRMAPNPDEAAKIAAEIG-GPCVVKSQVLIGKRGKA------- 54
Query: 341 GGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERS 520
GG++ N+PE A A ++ + G V+V E+ +E Y++I ++ +
Sbjct: 55 GGIKFPNSPEEAKKAAEEVFAMTI-------QGLPVEAVLVEEKLKIDKELYMSITVDGA 107
Query: 521 FNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFATEAH 700
PV+IAS+ GG++IE+ + + I + ID G+ V+ ++G+ AH
Sbjct: 108 AKMPVLIASAYGGMDIEE---QPEEYIIKKHIDPEMGMQAFIARDVVRQMGIS--LNSAH 162
Query: 701 G-----MIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
G +I+ +Y +F ++DA L+E+NP + DAK DD+A F
Sbjct: 163 GKQLVSIIQTLYKIFKEQDAELVEINPLVFS--DDKVIAADAKVTIDDDALF 212
>UniRef50_Q8G6B4 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bifidobacterium|Rep: Succinyl-CoA synthetase beta chain
- Bifidobacterium longum
Length = 400
Score = 89.4 bits (212), Expect = 1e-16
Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 6/237 (2%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
++++EY + LL + IP P A+ E + A ++ V+KAQV G RG+
Sbjct: 1 MDLYEYQARQLLEEQDIPTPDAIFAQNSHEVAEAADKIGYP-CVIKAQVKIGHRGQA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV++ + + A +L+ + T G + V+V E K EYYV+I
Sbjct: 57 ----GGVKIAHNRDEA------ILESESILPMT-IHGHKVSGVLVAEAKNILHEYYVSIS 105
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEF- 685
++R+ ++A++ GG +E++A E+P+A+ ID + + + IG
Sbjct: 106 VDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHIDALGDFDLAAATEMAQSIGFYHAD 165
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYA-----EXALTGQFFCLDAKFXFDDNAEF 841
+A ++ KM+ F DA L+E+NP A + T Q LDAK DDNA F
Sbjct: 166 VDQAAQILLKMWRCFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDNASF 222
>UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Methanomicrobiales|Rep: Succinyl-CoA synthetase,
beta subunit - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 361
Score = 89.4 bits (212), Expect = 1e-16
Identities = 71/229 (31%), Positives = 110/229 (48%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ EY + + R+ GIPVP + + DEA A + + +VLKAQV GGRGK
Sbjct: 1 MKFREYEAKQIFREAGIPVPNSVLITSADEA-NAAQKKVAEKVVLKAQVDVGGRGKA--- 56
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
G+ N +VA D+ K +K L V K ++V E EYY++I
Sbjct: 57 GGILPA-NAENISDVARDLFAKTIKGLPVEK-----------ILVEEALEISHEYYLSIT 104
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFA 688
++R+ P+I+ SS+GGV IE +A E P+A+ +D D I R + +E
Sbjct: 105 IDRAKKMPLILFSSEGGVEIETLAKERPEALRRVYVDPSFVTLPDFIVRNVIGTNPKEIG 164
Query: 689 TEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
T +++ ++ +F +DA+L E+NP D K DDN+
Sbjct: 165 T----IVRDLFAVFRSRDAVLAEINPLV--MTPKGILAADGKIILDDNS 207
>UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 390
Score = 88.2 bits (209), Expect = 2e-16
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Frame = +2
Query: 155 VHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNG 334
++EY + + +GIP+ + +A EA + K +V+KAQV+AGGRGK
Sbjct: 3 LYEYEAKEVFSKYGIPLGQNGIATNPAEAGMICAGIG-KPVVVKAQVMAGGRGKA----- 56
Query: 335 LKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMME 514
G + PE A A ++L + G +++ E+ RE Y +I M+
Sbjct: 57 --GLILPAADPEAAAKAAAQILGK-------EHHGEQVKKLLIEEQIEIAREVYASITMD 107
Query: 515 RSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EFAT 691
+ PV++ S+QGG+ IE +AA NP+ + E ID + ++ + + G +
Sbjct: 108 FTEGKPVMMVSAQGGMEIESLAAANPELLIKEHIDPWREVFGHRLRDLWRRAGFRGGQVV 167
Query: 692 EAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
E ++ ++ +FL+ DAL E+NP G+ DAK DD A F
Sbjct: 168 ELENILGRLVRVFLETDALTAEINPLV-MTQEGKIIAADAKLILDDEASF 216
>UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n=1;
unknown|Rep: UPI00015B9071 UniRef100 entry - unknown
Length = 384
Score = 87.4 bits (207), Expect = 4e-16
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYT-LLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTF 325
+N E+++ +L GIPVP+ + +T +EA EL ++KAQV G RGK
Sbjct: 1 MNFLEHVAKARVLAPAGIPVPRAVLCRTPEEAAAAFGELGP--CMVKAQVPTGKRGKA-- 56
Query: 326 KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAI 505
GG++ N E A +A ++L + GA V++ ++ E+Y A+
Sbjct: 57 -----GGIKPANAAEEARGVAERILGMTIDCHAVGA-------VLLEQQATIASEFYAAV 104
Query: 506 MMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEF 685
+++ + P+++ S++GG++IE+VAA PDA+ +D +G ++ + L
Sbjct: 105 LIDTASRCPLVLFSTEGGMDIEEVAATRPDALRRHAVDPEAGFDAAAARALLAGLDLGGA 164
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
++ + + + DA LIE+NP A G+ LD K DD+A F
Sbjct: 165 EGAVADILASLTETSGRVDAELIEINPLAVLD-DGRVVALDCKLTLDDSAAF 215
>UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), beta
chain; n=3; Methanococcus maripaludis|Rep: Succinate-CoA
ligase (ADP-forming), beta chain - Methanococcus
maripaludis
Length = 362
Score = 85.8 bits (203), Expect = 1e-15
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ +HEY + + +++ IP+PK + K E+I + +V+KAQVL GGRGK
Sbjct: 1 MKLHEYEAKEIFKENNIPIPKNKLVSGKVESIDYP-------VVIKAQVLVGGRGKA--- 50
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GG+ + D A + ++ L+ G + V++ E+ +EYYV ++
Sbjct: 51 ----GGILFADNV----DDANEKIESLIGNT---VKGELVEKVLLEEQIKIVKEYYVGVV 99
Query: 509 MERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEF- 685
+ R+ V+I S++GGV+IE+VA++ P+ I ++ +++K G+
Sbjct: 100 VNRNEKNNVVIFSTEGGVDIEEVASKTPEKIIKLSLNPEKEFLPYLARGMLKKAGIPSAE 159
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ ++ K+Y F D +L E+NP G+ DA DD+A F
Sbjct: 160 IPKVADVLCKVYKAFKNMDGILAEINPLV-FTEDGKIIAADAVLNVDDDAYF 210
>UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Caldivirga maquilingensis IC-167|Rep: Succinyl-CoA
synthetase, beta subunit - Caldivirga maquilingensis
IC-167
Length = 377
Score = 84.6 bits (200), Expect = 3e-15
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Frame = +2
Query: 161 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 340
EY +L +G+ VPK V + + K + + +K+QV GR K
Sbjct: 5 EYKGKEILAKYGVSVPKGVVISSVSDIDKSNLKY---PVFVKSQVPFAGRAK-------M 54
Query: 341 GGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERS 520
G V+ N + A IA + L +++ + V++ E +EYYV++ ++RS
Sbjct: 55 GLVKRANNKDEAKQIASEYLGKVIQDFEV-------KKVLLEEGVDVVKEYYVSVTIDRS 107
Query: 521 FNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EFATEA 697
+I+AS +GGV+IE++A +P+ I I G+ D + + + +G E A++
Sbjct: 108 SRTFIILASPEGGVDIEEIARTSPEKIYRGRIHPFEGLRDYTVNAINKFMGFTGELASKF 167
Query: 698 HGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+++ MY++F DA L+E+NP A G F LD K DDNA
Sbjct: 168 ASLLRIMYNVFETYDAELVEINPLA-LTRDGNFVALDVKIMIDDNA 212
>UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4;
Bacteria|Rep: Succinyl-CoA ligase beta subunit - Aquifex
aeolicus
Length = 436
Score = 81.0 bits (191), Expect = 3e-14
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Frame = +2
Query: 149 LNVHEYISYT-LLRDHGIPVPKFN-VAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT 322
++++EY +Y + + +GIP PK+ V D+ ++F +L + V+K+QVL G RGK
Sbjct: 1 MDLYEYEAYDKIFKKYGIPTPKYMFVEHITDDVVEFVNQLG--ECVVKSQVLVGKRGKA- 57
Query: 323 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVA 502
G VR+ + P+ A L+++ + G + V+V E+ +E Y +
Sbjct: 58 ------GAVRVCSNPDEA-------LEEIETLLRMTVYGEMPVGVLVVEKANILKELYAS 104
Query: 503 IMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-Q 679
I+ PV+ S +GG++IE+V PD + PI+ + G+ + + ++G
Sbjct: 105 IVYSTDHRAPVLTLSLEGGMDIEEVP---PDKVKSWPINPLKGLYPHMVRNYLLELGFPH 161
Query: 680 EF---ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQ--FFCLDAKFXFDDNA 835
E+ + +I +M+D F +A L+E+NP A G+ LDA DD+A
Sbjct: 162 EYMPVLRKLSEVIARMWDAFWGAEARLLEINPLAIVDRGGKPDVLALDAVVKIDDDA 218
>UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=3; Clostridia|Rep:
ATP-dependent carboxylate-amine ligase-like, ATP-grasp -
Desulfitobacterium hafniense (strain DCB-2)
Length = 425
Score = 80.6 bits (190), Expect = 5e-14
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Frame = +2
Query: 161 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 340
EY L G+PVPK A T +EA + A E + +K QV AGGRGK
Sbjct: 6 EYQGKEWLAKAGMPVPKGRPASTPEEA-REAAEWIGGPVAVKGQVQAGGRGKA------- 57
Query: 341 GGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMME-- 514
G V++VNTP+ A A ++L + + G V+V E+ ++E+Y + ++
Sbjct: 58 GIVKLVNTPDEAAAAAAEILSKTV-------KGLPVRKVLVEEKLDIKKEFYCSFVVNGA 110
Query: 515 RSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL-QEFAT 691
+ P+++ S +GG++IE V + I +PI +G+ + K G+ E T
Sbjct: 111 KEARSPMLMFSVEGGMDIESVPEDKLLKINVDPI---NGLQTYDAVDLAAKAGIAPEELT 167
Query: 692 EAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ + K+ + K D + +E+NP+ G C D K D+++
Sbjct: 168 KFAKFLTKLSQTYKKYDCMTLEINPFVMTG-NGNLICADCKMEIDNSS 214
>UniRef50_Q07LP6 Cluster: Succinate--CoA ligase; n=1;
Rhodopseudomonas palustris BisA53|Rep: Succinate--CoA
ligase - Rhodopseudomonas palustris (strain BisA53)
Length = 375
Score = 79.0 bits (186), Expect = 1e-13
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Frame = +2
Query: 149 LNVHEYISYTL-LRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTF 325
+N+ E+ + TL L GI V ++A L+ ++KAQV G RGK
Sbjct: 1 MNLLEHAAKTLVLALAGIATLPSQVCHKPEDAAAAVAVLSPA--MIKAQVPTGKRGKA-- 56
Query: 326 KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAI 505
GG+R +TPE A + +L + G+ + V+V +R E+Y A+
Sbjct: 57 -----GGIRPADTPEEARAVTRDILAMTI-------DGQDVSSVLVEQRADIADEFYAAV 104
Query: 506 MMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEF 685
+ + + PV++ S +GGV IE A+ +P ++ +D++ G + + + L+
Sbjct: 105 LCDTARRLPVVLFSPEGGVEIETTASRSPASLRRYEVDVLRGFGRSEAELFVTGLDLRGA 164
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTG-QFFCLDAKFXFDDNAEF 841
T ++ ++Y F+ DA L+E+NP A LT + LDAK D+ A F
Sbjct: 165 DTAVVDVLVRLYRAFVDSDAELVEINPLA--VLTDRRVVALDAKVTLDEAAAF 215
>UniRef50_A3GUP8 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Vibrio cholerae NCTC 8457|Rep: Succinyl-CoA synthetase
beta chain - Vibrio cholerae NCTC 8457
Length = 148
Score = 75.8 bits (178), Expect = 1e-12
Identities = 48/135 (35%), Positives = 72/135 (53%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + L + G+PVP+ T EA + A ++T V+K QV AGGRGK
Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV + +T E A K L + LVT QT A G+ + ++V E E Y+ +
Sbjct: 58 ----GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAV 113
Query: 509 MERSFNGPVIIASSQ 553
++RS V +AS++
Sbjct: 114 VDRSTRRIVFMASTE 128
>UniRef50_A6LP53 Cluster: Succinate--CoA ligase; n=1; Thermosipho
melanesiensis BI429|Rep: Succinate--CoA ligase -
Thermosipho melanesiensis BI429
Length = 338
Score = 72.9 bits (171), Expect = 9e-12
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDE-AIKFATELNTKDIVLKAQVLAGGRGKGTF 325
+ ++E++ L ++HG+ +P+ + +KDE IKF VLK+QVL GGR K
Sbjct: 1 MKIYEFVGKQLFKEHGVKIPEGYLVTSKDELTIKFLPA------VLKSQVLVGGRMKA-- 52
Query: 326 KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAI 505
GG+ N D +LK+ + ++ +++ + +REYY+++
Sbjct: 53 -----GGILFANNQREFYDYGNILLKKNIKGEKPYG-------ILIEKMINIKREYYLSM 100
Query: 506 MMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEF 685
+++ +I+ S GG+NIE+ A D V I D+ +V+ K
Sbjct: 101 YIDKLEKDFMILFSEYGGINIEENA------------DKVIKINFDKY-KVLPK------ 141
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ H +I +Y L +KD LIE+NP AE L G LDA DDN+ F
Sbjct: 142 --KFHKIILTLYKLMKEKDLTLIEINPLAE-TLNGDLIALDAVLHLDDNSIF 190
>UniRef50_Q0PQT6 Cluster: Succinyl CoA ligase beta subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: Succinyl
CoA ligase beta subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 172
Score = 69.7 bits (163), Expect = 8e-11
Identities = 42/124 (33%), Positives = 64/124 (51%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+N+HEY + L D+GIPVP+ + +A A EL + ++K Q GGRGK
Sbjct: 1 MNLHEYQAKKLFADYGIPVPEGKTVSSPSDARAAAQELGGEVWLVKTQAHTGGRGKA--- 57
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIM 508
GGV + + + A +L LVTKQTG G N+V+V + RE Y+ +
Sbjct: 58 ----GGVTLAKSLDEVEAAAEAILGMTLVTKQTGPEGLPVNLVLVEQGSDIARELYLGAL 113
Query: 509 MERS 520
++R+
Sbjct: 114 LDRA 117
>UniRef50_Q8IQ64 Cluster: CG10622-PB, isoform B; n=1; Drosophila
melanogaster|Rep: CG10622-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 112
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +2
Query: 95 LLTASSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKD 274
L ++A K VR+LN+ E+ S LL+ +G+ + +F V + +
Sbjct: 5 LKAVTTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPE 64
Query: 275 IVLKAQVLAGGRGKGTFKNGLKGGVRM 355
V+KAQ+LAGGRGKGTF NG KGGV +
Sbjct: 65 YVVKAQILAGGRGKGTFDNGFKGGVHI 91
>UniRef50_P72927 Cluster: Succinate--CoA ligase; n=3;
Chroococcales|Rep: Succinate--CoA ligase - Synechocystis
sp. (strain PCC 6803)
Length = 401
Score = 67.3 bits (157), Expect = 5e-10
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPV-PKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTF 325
+++ EY + L + GIP+ P + T A+K ++ +VLK+QV AGGRGK
Sbjct: 1 MDLLEYQAKELFQQVGIPILPSQTIQNTT--ALK-RLQI-PYPMVLKSQVRAGGRGKA-- 54
Query: 326 KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAI 505
GGVR V + A + L + A +++ R + E ++AI
Sbjct: 55 -----GGVRFVENT-IDAIAAASAIFHLPI------ADEYPEVILAEARYDAQSELFLAI 102
Query: 506 MMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-E 682
+++ PV++ SS+GG+++E + + + + + + + R+ K+GL
Sbjct: 103 VLDYQRQCPVLMGSSEGGIDVETLLEQ------MQSVSLRTNFSPYLARRLAVKMGLTGP 156
Query: 683 FATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
T G+I KMY+LF+ D +IE+NP A G+ LD K +D A
Sbjct: 157 LVTAVSGIIGKMYELFVTYDLDVIEINPLGISA-DGEVMALDGKITVNDTA 206
>UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Succinate--CoA ligase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 368
Score = 66.9 bits (156), Expect = 6e-10
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Frame = +2
Query: 161 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 340
E+ + L R++GI + + +E K A EL V+K QV GGRGK
Sbjct: 5 EFQAKELFREYGINLLDSISSTNIEEGRKHAKELGYP-FVIKIQVPVGGRGKA------- 56
Query: 341 GGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERS 520
GG++ + +I + L + + A +++ + ++E Y++I + RS
Sbjct: 57 GGIQKCQNDDEF-EIKYPQVMDLTIKGEKARA------ILLEKMADIKKELYLSIFLNRS 109
Query: 521 FNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EFATEA 697
IIAS +GGV IE V + I + ++DD V +++GL+ + A
Sbjct: 110 KRCYTIIASDEGGVEIESVKNQIIKEIG------LGEVSDDLAQEVAKEMGLEGKHAEGV 163
Query: 698 HGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+KK+ L ++K+A L+E+NP A LD KF DDN+ F
Sbjct: 164 VDTLKKLSKLTIEKEAELVEINPLA-IMQDDSITALDGKFVTDDNSNF 210
>UniRef50_A0RTT8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Cenarchaeum symbiosum|Rep: Succinyl-CoA synthetase,
beta subunit - Cenarchaeum symbiosum
Length = 365
Score = 66.1 bits (154), Expect = 1e-09
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 2/229 (0%)
Frame = +2
Query: 161 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 340
EY + L ++GI VP+ +K ++A K A ++ V+K QV GGRGK
Sbjct: 2 EYQAKELFAEYGIKVPQGRASKGIEQARKDAKDIGYP-FVIKIQVPVGGRGKA------- 53
Query: 341 GGV-RMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMER 517
GG+ + N E+ +L+ V T G +++ + +E Y+++ + R
Sbjct: 54 GGIQKCTNEDEL-------VLRYPQVYDLT-IKGERARAILLEKMADISKELYLSLFLNR 105
Query: 518 SFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ-EFATE 694
S +IAS++GGV IE V ++ + + ++ + +V ++GL+ A +
Sbjct: 106 SKRCYTVIASAEGGVEIESVKSQIIKEVG------LGKVSPEVAAQVASEMGLEGAAAKD 159
Query: 695 AHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+++K+ L +K+A L E+NP A + G LD K DDNA F
Sbjct: 160 LSDILQKLSLLTTEKEAELAEINPLAILS-DGTLLALDGKVMTDDNAAF 207
>UniRef50_A1RXJ2 Cluster: Transcriptional regulator, Fis family;
n=1; Thermofilum pendens Hrk 5|Rep: Transcriptional
regulator, Fis family - Thermofilum pendens (strain Hrk
5)
Length = 372
Score = 61.3 bits (142), Expect = 3e-08
Identities = 53/187 (28%), Positives = 93/187 (49%)
Frame = +2
Query: 275 IVLKAQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNM 454
+++KAQV GRGK G V+ PE A +A ++ + + G R
Sbjct: 44 LIVKAQVRGWGRGKA-------GLVKSAENPEEALKVA----QEFFLREFNGEKIRY--- 89
Query: 455 VMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 634
V+V+ERK RE Y++ M+ + G +++AS GGV++E++ ++ P + ID G+
Sbjct: 90 VLVSERKRILREMYLSFMVSSNPPGFLLLASKHGGVDVEEL-SKTPGGLLKIFIDPFEGL 148
Query: 635 TDDQICRVIEKIGLQEFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAK 814
D + V +G+ + E +++ ++ +F + + L+EVNP A LD K
Sbjct: 149 RDYMVRTVAGYLGVPQEHIEK--ILRSLWQIFREYNFTLLEVNPLA--LTEDGVLALDRK 204
Query: 815 FXFDDNA 835
DD+A
Sbjct: 205 GVIDDDA 211
>UniRef50_Q4J9C1 Cluster: Succinyl-CoA synthetase beta chain; n=4;
Sulfolobaceae|Rep: Succinyl-CoA synthetase beta chain -
Sulfolobus acidocaldarius
Length = 337
Score = 58.8 bits (136), Expect = 2e-07
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
+ ++EY L + GIP+PK V D IK+ + V+KAQ+L G RGK
Sbjct: 1 MKLYEYEGKELFKAVGIPIPKGVVT---DSPIKWDGKA-----VVKAQLLEGARGK---- 48
Query: 329 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPR-REYYVAI 505
+G V++ T V IA +K+L + K + E P RE Y++
Sbjct: 49 ---RGLVKV--TDNVEQTIAE--MKKLGIQK------------FLVEEFIPHTRELYISA 89
Query: 506 MMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEF 685
+++R P+I AS++GG++IE N + + I + GI + + + +G++
Sbjct: 90 LIDRDTAEPIIAASTEGGIDIE----SNSNVKIFH-IPMERGIRSYDVYNIEKYLGVKGI 144
Query: 686 ATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
++K +Y L + DA L E+NP A G+ LD+K +DNA F
Sbjct: 145 ----EPILKGLYRLITEFDAELAEINPLA-VTNDGKIIALDSKVILEDNALF 191
>UniRef50_Q8YQB9 Cluster: Succinyl-CoA synthetase beta chain; n=4;
Nostocaceae|Rep: Succinyl-CoA synthetase beta chain -
Anabaena sp. (strain PCC 7120)
Length = 408
Score = 56.4 bits (130), Expect = 8e-07
Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Frame = +2
Query: 275 IVLKAQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNM 454
IVLK+QV AG R K GGVRMV T + A + + L + G + +
Sbjct: 40 IVLKSQVHAGEREK-------VGGVRMVETT-IDAIAAAQTIFNLSIW------GELPEV 85
Query: 455 VMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 634
++ + +E+Y+A++++ + PV++ S++ +++E +A + + E
Sbjct: 86 LLAESKYNSHQEFYLAVVLDTAVCRPVLLGSTEADIDLE-LADQKMQYVVVE-----QEF 139
Query: 635 TDDQICRVIEKIGLQEFATEAHG-MIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDA 811
+ R+ K+GLQ ++ +++KMY LF++KD L+E+NP L G+ L+
Sbjct: 140 SPFYARRLALKMGLQGTLMQSVSTVLEKMYQLFVQKDLDLVEINPLG-VNLAGEVMALNG 198
Query: 812 KFXFDDNA 835
K ++ A
Sbjct: 199 KVGVNERA 206
>UniRef50_Q110Z1 Cluster: Succinate--CoA ligase; n=2;
Oscillatoriales|Rep: Succinate--CoA ligase -
Trichodesmium erythraeum (strain IMS101)
Length = 405
Score = 56.4 bits (130), Expect = 8e-07
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPV-PKFNVAKTKD-EAIKFATELNTKDIVLKAQVLAGGRGKGT 322
+++ EY + L + GIPV P + KD + +K +VLK+QV G R
Sbjct: 1 MDLLEYQAKALFSEMGIPVLPSQRIDYPKDLKKLKIPYP-----VVLKSQVHTGERSS-- 53
Query: 323 FKNGLKGGVRMV-NTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPR-REYY 496
GG++ V NT + A + + L + + A V++ E K+ +E Y
Sbjct: 54 -----LGGIKFVENTIDAVA--AAQTIFNLPIKDEYPA-------VLLAEAKYNADQELY 99
Query: 497 VAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGL 676
+A++++ PV++ S QGG++ E + + + + + R++ KIGL
Sbjct: 100 LAVVLDPIVRRPVLLGSKQGGIDTETAIK------SMQKVVVNQEFSPFYARRLMVKIGL 153
Query: 677 QEFATE-AHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNA 835
+ E +++KMY LF++KD +IE+NP + G+ LD K +D A
Sbjct: 154 EGKLIELVSHIVEKMYQLFVEKDLDMIEINPLG-ISPKGEVMALDGKVSVNDYA 206
>UniRef50_A7HMU2 Cluster: Succinate--CoA ligase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Succinate--CoA
ligase - Fervidobacterium nodosum Rt17-B1
Length = 355
Score = 56.4 bits (130), Expect = 8e-07
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 3/234 (1%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTK---DIVLKAQVLAGGRGKG 319
+ + EY+ LL +HG VP+ K +D K T+ + VLK+QVL GGR K
Sbjct: 1 MKIQEYVGKRLLSEHGFYVPRSLFVKEEDIDSKELTQKILELGFPQVLKSQVLVGGRMKA 60
Query: 320 TFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYV 499
GGV + E + + L++ LV K+ G + V++ E +E Y
Sbjct: 61 -------GGVIIAKNLEE----SMRALRE-LVNKE--IKGEMPEGVLIEEFVKHDKELYF 106
Query: 500 AIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQ 679
I ++R+ ++I S GGV+IE+ + P+ +V++
Sbjct: 107 GITIDRTNRNILMIYSEFGGVDIEEASRMFPN-------------------KVLKTYSFN 147
Query: 680 EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
+ E K + D+F K D L+E+NP + LDA DDNA F
Sbjct: 148 DLPEEFKETAKVLLDIFKKLDLTLLEINPIG--VTKSGYVMLDAVMHVDDNALF 199
>UniRef50_UPI0000F2DCF5 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 263
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 641 DQICRVIEKIGL-QEFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKF 817
+Q R+ +K+G A + K+Y+LFLK DA ++E+NP E + G C+DAK
Sbjct: 20 EQAVRLAQKMGFPSNLVDSAADNMVKLYELFLKYDATMVEINPMLED-VDGGVLCMDAKI 78
Query: 818 XFDDNA 835
FD N+
Sbjct: 79 NFDSNS 84
>UniRef50_Q8KDG1 Cluster: Citrate lyase, subunit1; n=11;
Chlorobiaceae|Rep: Citrate lyase, subunit1 - Chlorobium
tepidum
Length = 398
Score = 50.8 bits (116), Expect = 4e-05
Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 5/226 (2%)
Frame = +2
Query: 179 LLRDHGIPVPKFNVAKTKDEAIKFATE---LNTKDIVLKAQVLAGGRGKGTFKNGL-KGG 346
L GIPVP + V + L +V+KA GGR FK GL K G
Sbjct: 12 LFNKWGIPVPNYVVIMDPKRLAQLGEANKWLRESKLVVKAHEAIGGR----FKLGLVKIG 67
Query: 347 VRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERSFN 526
+ + D A + +++L K A R V+V E E+YV+I+ R +
Sbjct: 68 LNL--------DEAIQASREMLGAKVGTAEVR---QVIVAEMLDHDAEFYVSIIGNR--D 114
Query: 527 GPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFATEAHGM 706
G ++ S GGV+IED N D++ I + T +Q+ + ++ G + E G
Sbjct: 115 GAELLISKYGGVDIED----NWDSVRRIQIPLDEHPTIEQLTALAKEAGFEGEIAERVGK 170
Query: 707 I-KKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDAKFXFDDNAEF 841
I ++ F +DA IE+NP +F LDA D +A F
Sbjct: 171 ICSRLVLCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARF 216
>UniRef50_Q39YX4 Cluster: Succinyl-CoA synthetase beta subunit-like;
n=1; Geobacter metallireducens GS-15|Rep: Succinyl-CoA
synthetase beta subunit-like - Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210)
Length = 423
Score = 46.8 bits (106), Expect = 7e-04
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +2
Query: 488 EYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEK 667
E YV+I + PV++ +++GGV++EDV E+ I + P V+G+ I + +
Sbjct: 107 EIYVSISESSEYRMPVLLLTTKGGVDVEDVPPEDKRTIVFNP---VTGVKSFHINDALRE 163
Query: 668 IGL-QEFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQF--FCLDAKFXFDDN 832
+ ++ + + K++ ++ +E+NP + G++ F D K FD +
Sbjct: 164 LKCPPQYISSLVQHLPKLWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFDQD 221
>UniRef50_Q8R6L7 Cluster: UDP-N-acetylmuramyl tripeptide synthase;
n=4; Clostridia|Rep: UDP-N-acetylmuramyl tripeptide
synthase - Thermoanaerobacter tengcongensis
Length = 879
Score = 40.7 bits (91), Expect = 0.045
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 179 LLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKN 331
+L+DHG+PVP+ +VA ++EAI A EL +V+K G +GKG N
Sbjct: 219 ILKDHGLPVPEGDVAYNEEEAISIAEELG-YPVVIKP--YNGNQGKGVHLN 266
>UniRef50_Q1NU51 Cluster: Cyanophycin synthetase; n=3; delta
proteobacterium MLMS-1|Rep: Cyanophycin synthetase -
delta proteobacterium MLMS-1
Length = 891
Score = 39.1 bits (87), Expect = 0.14
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 158 HEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIV 280
H+Y++ LL DHG+PVP +A ++A+K A +L +V
Sbjct: 225 HKYVANRLLVDHGLPVPPAGLAANLEQAVKLAEQLGWPVVV 265
>UniRef50_A0LDT1 Cluster: ATP-grasp domain protein; n=5;
Proteobacteria|Rep: ATP-grasp domain protein -
Magnetococcus sp. (strain MC-1)
Length = 424
Score = 38.3 bits (85), Expect = 0.24
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +2
Query: 488 EYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEK 667
E Y +I + P + + GGV+IE++ P+ I P D ++G + + +
Sbjct: 106 EVYFSITDSTKYRAPTVTITHHGGVDIEELP---PEKIATVPFDPLTGFKGFVVSNALTR 162
Query: 668 IGL-QEFATEAHGMIKKMYDLFLKKDALLIEVNP 766
+G E + + K++DL+ +E+NP
Sbjct: 163 LGAPNEIISPLVQNLPKLWDLYHNYGMTTLELNP 196
>UniRef50_Q1VJG9 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Psychroflexus torquis ATCC 700755|Rep: Succinyl-CoA
synthetase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 247
Score = 37.9 bits (84), Expect = 0.32
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 629 GITDDQICRVIEKIGLQ-EFATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQ-FFC 802
G+ + I + I+ L ++ E H +I K+Y LF + D L+EVNP A+T Q
Sbjct: 15 GLDSNMINQAIKDAKLNLDYIDELHEIIYKLYTLFTEGDCDLVEVNP---LAITKQGVTA 71
Query: 803 LDAKFXFDDNA 835
LD+K D NA
Sbjct: 72 LDSKVSLDMNA 82
>UniRef50_A0GFR9 Cluster: CoA-binding; n=1; Burkholderia
phytofirmans PsJN|Rep: CoA-binding - Burkholderia
phytofirmans PsJN
Length = 750
Score = 37.5 bits (83), Expect = 0.42
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQ 292
L++ E+ S LLRD+GI VPK +A+ +D+A A + +V+K Q
Sbjct: 504 LDLTEHASQALLRDYGIDVPKSGLAQNRDQACALARAIGF-PLVIKVQ 550
>UniRef50_Q8ZTH6 Cluster: Putative uncharacterized protein PAE3249;
n=3; Thermoproteaceae|Rep: Putative uncharacterized
protein PAE3249 - Pyrobaculum aerophilum
Length = 232
Score = 37.5 bits (83), Expect = 0.42
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +2
Query: 179 LLRDHGIPVPKFNVAKTKDEAIKFATEL 262
LLR +GIPVP+F VA+ ++EA+K A E+
Sbjct: 25 LLRAYGIPVPEFAVARDEEEAVKAAEEI 52
>UniRef50_Q58010 Cluster: Uncharacterized protein MJ0590; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0590 -
Methanococcus jannaschii
Length = 704
Score = 37.5 bits (83), Expect = 0.42
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +2
Query: 128 SKQQVRHL--NVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL 262
+K+ ++ L N +EY + LL +G+PVPK +AK +DEA+++ +L
Sbjct: 478 NKEIIKELLSNPNEYTAKKLLSIYGLPVPKGYLAKNEDEALEYCKKL 524
>UniRef50_Q8DW15 Cluster: Glutathione biosynthesis bifunctional
protein gshAB (Gamma-GCS-GS) (GCS-GS) [Includes:
Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-
glutamylcysteine synthetase) (Gamma-ECS) (GCS);
Glutathione synthetase (EC 6.3.2.3) (Glutathione
synthase) (GSH synthetase) (GSH-S) (GSHase) (GS)]; n=17;
Streptococcus|Rep: Glutathione biosynthesis bifunctional
protein gshAB (Gamma-GCS-GS) (GCS-GS) [Includes:
Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-
glutamylcysteine synthetase) (Gamma-ECS) (GCS);
Glutathione synthetase (EC 6.3.2.3) (Glutathione
synthase) (GSH synthetase) (GSH-S) (GSHase) (GS)] -
Streptococcus mutans
Length = 754
Score = 37.5 bits (83), Expect = 0.42
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +2
Query: 158 HEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 328
++ ++ +LR++G PVP KDEA+++ +++ K IV+K + G G F+
Sbjct: 484 NKVVTKKILRENGYPVPAGAEFDNKDEALRYYSQIKNKPIVVKPKTTNFGLGISIFE 540
>UniRef50_Q9V1X5 Cluster: AcdB acetate--coA ligase (ADP-forming) (EC
6.2.1.13), beta chain; n=8; Thermococcaceae|Rep: AcdB
acetate--coA ligase (ADP-forming) (EC 6.2.1.13), beta
chain - Pyrococcus abyssi
Length = 232
Score = 37.1 bits (82), Expect = 0.55
Identities = 13/28 (46%), Positives = 24/28 (85%)
Frame = +2
Query: 179 LLRDHGIPVPKFNVAKTKDEAIKFATEL 262
+L+ +GIP+P+F VA+ ++EA+KF+ E+
Sbjct: 29 ILKLYGIPIPEFKVARDEEEAVKFSREI 56
>UniRef50_A2QQL9 Cluster: Contig An08c0100, complete genome; n=5;
cellular organisms|Rep: Contig An08c0100, complete
genome - Aspergillus niger
Length = 325
Score = 36.3 bits (80), Expect = 0.96
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Frame = +2
Query: 455 VMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 634
+ V E ++++++ ++R+ P I+AS+ G + A YE D G
Sbjct: 36 IPVKEAALSESDFFLSLTVDRTALSPCILASTSAGF---EPAQTGRFPFAYEGTDF--GS 90
Query: 635 TDDQICRVIEKIGLQEFATEAHG-MIKKMYDLFLKKDALLIEVNPYAEXALTGQFFCLDA 811
T + V + L A + +++ ++ +F +K+A L+EV A T F DA
Sbjct: 91 TTLLVETVASYLQLPATAHDNLAQLLQGLWRVFKEKEAYLLEVRANA----TSAFEVRDA 146
Query: 812 KFXFDDNA 835
+F FDD A
Sbjct: 147 RFAFDDAA 154
>UniRef50_A0DDG8 Cluster: Chromosome undetermined scaffold_46, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_46,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2450
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 403 FKHLSCYITSNFRCVDHSNSTFKSILKGTFPST-TSKNLC 287
+ + +CY SNF+C++ + +K++L T T T+ NLC
Sbjct: 811 YTNSNCYFDSNFKCIEVKDEPYKNVLLNTLNCTQTNLNLC 850
>UniRef50_A2BMF5 Cluster: Conserved archaeal protein; n=2;
Archaea|Rep: Conserved archaeal protein - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 238
Score = 35.9 bits (79), Expect = 1.3
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Frame = +2
Query: 161 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 340
E+ +Y + +G+PVP++ +A+ DEA + + E+ +VLK +++ T K+ +
Sbjct: 21 EHEAYAVAEAYGLPVPRYGLARDPDEAARLSREIGF-PVVLK--IVSPDI---THKSDV- 73
Query: 341 GGVRMVNTPEVAGDIAGKMLKQLLV-TKQTGAAGRICNMVMVTERKFPRREYYVAIMMER 517
GGV + E D A K Q++ K+ RI V++ E E V ++
Sbjct: 74 GGVILDIRSE---DDARKAFTQIIENVKKHAPEARIAG-VLIQEMVPSDLEVIVGATRDQ 129
Query: 518 SFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQICRVIEKIGLQEFATEA 697
F GP+++ GG+ +E + + PID I + + R++E + +
Sbjct: 130 IF-GPLLM-FGLGGIFVEVLKDVSFRLAPVTPIDAEEMIKEIKAYRILE-----GYRGKP 182
Query: 698 HGMIKKMYDLFLKKDALLIEVNP 766
I+ + D+ +K L++E NP
Sbjct: 183 PRDIEALKDIIVKTSKLMLE-NP 204
>UniRef50_Q2BI31 Cluster: Putative uncharacterized protein; n=1;
Neptuniibacter caesariensis|Rep: Putative
uncharacterized protein - Neptuniibacter caesariensis
Length = 507
Score = 35.5 bits (78), Expect = 1.7
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = -3
Query: 534 TGPLKLRSIIIAT*-YSLRGNFLSVTMTMLQIRPAAPVCFVTRSCLSIFPAISPATSGVL 358
TG L ++I+IA ++ S +++ Q+RP + RSCL + PA+ VL
Sbjct: 118 TGFLFSQTILIALYLFAAFAVITSGLLSVYQLRPKGLLKTFKRSCLLLLPAL--PLMAVL 175
Query: 357 TIRTPPLSPFLKVPFPRPPARTCAFRTMSLVLSSVANLIASSLVLATLNLGTGIP 193
I P P +V R ART TMS +++LI S V +P
Sbjct: 176 FIGMPRFGPLWEVGLDRTAARTGLSETMS--PGDISSLIRSPEVAFRATFEAEVP 228
>UniRef50_Q1Q7K5 Cluster: Strongly similar to acetate-CoA ligase
(ADP-forming) subunit beta; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to acetate-CoA
ligase (ADP-forming) subunit beta - Candidatus Kuenenia
stuttgartiensis
Length = 242
Score = 35.5 bits (78), Expect = 1.7
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 7/233 (3%)
Frame = +2
Query: 89 NXLLTASSANKFPSKQQVRHLNVHEYI---SYTLLRDHGIPVPKFNVAKTKDEAIKFATE 259
N L+ ++ N Q N HE + + LL +GI +F VA + EAI+ A
Sbjct: 2 NIFLSHTARNAQKIIQNALEQNRHELLEPEAKQLLGTYGIVTTRFLVASSAHEAIQAANS 61
Query: 260 LNTKDIVLKAQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAG 439
+ +VLK +++ T G+ + + N EVA K+ K + +T
Sbjct: 62 IK-YPVVLK--IISPDLSHKTDAGGVM--LNIQNDKEVAAAYE-KIFKNI---SKTVPDA 112
Query: 440 RICNMVMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIE---DVAAENPDAITYE 610
RI ++V E P E V + + F GP ++ GG+ +E DV+ YE
Sbjct: 113 RIYG-ILVEEMSTPSTEIIVGGLRDPQF-GPTVMFGI-GGIFVELFKDVSFRIAPVEDYE 169
Query: 611 PIDIVSGITDDQICRVIEKIGLQEFATEAHGMIKKMYDLFLKKDALL-IEVNP 766
+D++ + ++ + + H +I ++ D+ + + + I++NP
Sbjct: 170 ALDMIREVKGARLLSGFRNAAPLDISEICH-IIIRVSDIMISNEEIKEIDLNP 221
>UniRef50_Q26CD7 Cluster: Putative nucleoside diphosphate sugar
pyrophosphorylase; n=1; Flavobacteria bacterium
BBFL7|Rep: Putative nucleoside diphosphate sugar
pyrophosphorylase - Flavobacteria bacterium BBFL7
Length = 347
Score = 34.3 bits (75), Expect = 3.9
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 131 KQQVRHLNVHEYISYTLLRDHGIPV-PKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGG 307
KQ V H+ ++I ++ R+ I + P N KT + E+ + L+ ++AGG
Sbjct: 70 KQFVHHIENGDFIDLSVYREQNIKILPVLNNDKTLSRILDL--EITKSTLPLECMIMAGG 127
Query: 308 RGK 316
RGK
Sbjct: 128 RGK 130
>UniRef50_P07244 Cluster: Bifunctional purine biosynthetic protein
ADE5,7 [Includes: Phosphoribosylamine--glycine ligase
(EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide
synthetase) (Phosphoribosylglycinamide synthetase);
Phosphoribosylformylglycinamidine cyclo-ligase (EC
6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase)]; n=12; cellular
organisms|Rep: Bifunctional purine biosynthetic protein
ADE5,7 [Includes: Phosphoribosylamine--glycine ligase
(EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide
synthetase) (Phosphoribosylglycinamide synthetase);
Phosphoribosylformylglycinamidine cyclo-ligase (EC
6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase)] - Saccharomyces cerevisiae
(Baker's yeast)
Length = 802
Score = 34.3 bits (75), Expect = 3.9
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +2
Query: 122 FPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLA 301
F + L + S + H IP ++V +EAI F K V+KA +A
Sbjct: 97 FGPSVKAAQLEASKAFSKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIA 156
Query: 302 GGRG 313
G+G
Sbjct: 157 AGKG 160
>UniRef50_Q97NY4 Cluster: NAD-dependent epimerase/dehydratase family
protein; n=12; Streptococcus pneumoniae|Rep:
NAD-dependent epimerase/dehydratase family protein -
Streptococcus pneumoniae
Length = 233
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 641 DQICRVIEKIGLQE--FATEAHGMIKKMYDLFLKKDALLIEVNPYAEXALTGQ 793
+Q+ +V+ ++G+Q+ F++ A D + +D LL VNPYAE L G+
Sbjct: 100 NQVLKVLSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGE 152
>UniRef50_A1WYS2 Cluster: Phosphoribosylaminoimidazole carboxylase,
ATPase subunit; n=5; cellular organisms|Rep:
Phosphoribosylaminoimidazole carboxylase, ATPase subunit
- Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 384
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 107 SSANKFPSKQQVRHLNV--HEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIV 280
++A + P + R L H + T LR+HG+PV F +EA + ++
Sbjct: 89 AAAERLPVRPSPRALATTQHRILEKTFLREHGLPVVPFEAVHGPEEAAAAVARIGAPAVI 148
Query: 281 LKAQVLAGGRGK 316
A + G+G+
Sbjct: 149 KSAGLGYDGKGQ 160
>UniRef50_A1IDG9 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 253
Score = 33.9 bits (74), Expect = 5.1
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 149 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKA 289
L + EY + +L +G+PV + +AKT DEA+ A EL +VLKA
Sbjct: 40 LALSEYEAKQVLAAYGVPVTREVLAKTPDEAVAAAGELG-YPVVLKA 85
>UniRef50_Q653A4 Cluster: Basic helix-loop-helix-like; n=4; Oryza
sativa|Rep: Basic helix-loop-helix-like - Oryza sativa
subsp. japonica (Rice)
Length = 396
Score = 33.9 bits (74), Expect = 5.1
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 444 IRPAAPVCFVTRSCLSIFPAISPATSGVLTIRTPPLSPFLKVPF-PR-PPARTCAFRTMS 271
+ P P C P +SP L TPPLSP L VP PR PP +R +
Sbjct: 206 LSPRPPATVAASCCSPRPPQLSPRLPPQLLKSTPPLSPRLAVPISPRTPPTPGSPYRLLR 265
Query: 270 L 268
L
Sbjct: 266 L 266
>UniRef50_O80261 Cluster: Orf 498; n=1; Vibrio phage fs2|Rep: Orf
498 - Vibrio phage fs2
Length = 498
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 293 VLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMV 457
+L GG K +N +K + +NTP +A I + Q +V TG A N+V
Sbjct: 47 ILGGGSCKRDTRNFIKASISSINTPHIAYRIDKYLDDQCIVLSSTGNASVTLNVV 101
>UniRef50_A2EVI4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 398
Score = 33.9 bits (74), Expect = 5.1
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -2
Query: 517 AFHHNCHVVFPAWELPLCDHDHVANSSCCPCLFCY*ELFKHLSCYITSNFRCVDHSNSTF 338
+ H C WE PLC + +++ S PC C + C + C DH+ F
Sbjct: 158 SMHTTCAQRMKQWECPLCRYAPISSLSLSPCEVCG-TFDRPYICLSCARSFCYDHALEHF 216
Query: 337 KS 332
K+
Sbjct: 217 KN 218
>UniRef50_Q4J9J2 Cluster: Phosphoribosylaminoimidazole carboxylase
ATPase; n=3; Sulfolobaceae|Rep:
Phosphoribosylaminoimidazole carboxylase ATPase -
Sulfolobus acidocaldarius
Length = 364
Score = 33.9 bits (74), Expect = 5.1
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2
Query: 122 FPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLA 301
FP V L Y ++H +P P+F VA+ +EA+K E VLK + L
Sbjct: 89 FPGINSVE-LKRERYKEKLYYKEHNLPTPRFLVAEDGEEALKILKEEFNGIGVLK-ESLG 146
Query: 302 GGRGKGTF 325
G GKG +
Sbjct: 147 GYDGKGQY 154
>UniRef50_A2SRS8 Cluster: CoA-binding domain protein; n=4;
Methanomicrobiales|Rep: CoA-binding domain protein -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 707
Score = 33.9 bits (74), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 173 YTLLRDHGIPVPKFNVAKTKDEAIKFATEL 262
Y LLR +P P F + +T D+A K AT++
Sbjct: 35 YDLLRQFNVPAPAFEIVQTPDDAAKAATKI 64
>UniRef50_Q4SMD7 Cluster: Chromosome 3 SCAF14553, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1036
Score = 33.5 bits (73), Expect = 6.8
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = +2
Query: 98 LTASSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDI 277
L A+ F + L + S + HGIP ++ EA F + +
Sbjct: 86 LQAAGVPCFGPSAKAAQLEASKSFSKAFMERHGIPTARYGSFTDPQEACNFIRSADFPAL 145
Query: 278 VLKAQVLAGGRG 313
V+KA LA G+G
Sbjct: 146 VVKASGLAAGKG 157
>UniRef50_Q5P5S5 Cluster: Predicted Acetyl-CoA synthetase; n=4;
Proteobacteria|Rep: Predicted Acetyl-CoA synthetase -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 727
Score = 33.5 bits (73), Expect = 6.8
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 137 QVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 286
Q N+ E+ + TLLR HG+ VP + + DE + A + +V+K
Sbjct: 498 QAEARNLFEFEAKTLLRAHGVDVPAEALVRNVDELDEVAARFGDRPLVMK 547
>UniRef50_Q86AJ2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Histidine kinase DhkE; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Histidine kinase DhkE - Dictyostelium
discoideum (Slime mold)
Length = 1216
Score = 33.5 bits (73), Expect = 6.8
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 596 AITYEPIDIVSG-ITDDQICRVIEKIGLQEFATEAHGMIKKMYDLFLKKD 742
+I Y+ I +V I +DQ+ + +K+ +F + G +KK+Y +F K+D
Sbjct: 214 SIKYDSIVMVDKMINNDQLSMIKDKVNRNQFLIFSSGSLKKLYSVFGKED 263
>UniRef50_Q9FKD7 Cluster: E3 ubiquitin-protein ligase SINA-like 7;
n=4; Arabidopsis thaliana|Rep: E3 ubiquitin-protein
ligase SINA-like 7 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 286
Score = 33.5 bits (73), Expect = 6.8
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = -2
Query: 505 NCHVVFPAWELPL--CDHDHVANSSCCPCL 422
+C + + A+ +P+ CD+ H+A SSCCP L
Sbjct: 50 DCPICYEAFTIPIFQCDNGHLACSSCCPKL 79
>UniRef50_P77886 Cluster: Carbamoyl-phosphate synthase
pyrimidine-specific large chain; n=32; Firmicutes|Rep:
Carbamoyl-phosphate synthase pyrimidine-specific large
chain - Lactobacillus plantarum
Length = 1058
Score = 33.5 bits (73), Expect = 6.8
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 179 LLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKG 319
L+ + G PVP +A+T DEA+ FA + IV A + GG G G
Sbjct: 135 LMEELGEPVPASGIARTVDEALAFAKQAGYPVIVRPAFTM-GGTGGG 180
>UniRef50_Q4SK98 Cluster: Chromosome 13 SCAF14566, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF14566, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 251
Score = 33.1 bits (72), Expect = 9.0
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +2
Query: 230 KDEAIKFATELNTKDIVLKAQVLAGGRGKGTF-----KNGLKGGVRMVNTPEVAGDIAGK 394
+D I+ A EL + + L A+ AGG+G + GL+ G+ N P A I G+
Sbjct: 18 RDRWIRVAAELTRETLTLTAEAEAGGQGANYWDYTSGSAGLRNGLSNGNEPGSAAGIPGR 77
Query: 395 MLKQLL 412
QLL
Sbjct: 78 GQDQLL 83
>UniRef50_Q47X73 Cluster: Pyridoxamine 5'-phosphate oxidase /
oxidoreductase, NAD-dependent; n=4; Proteobacteria|Rep:
Pyridoxamine 5'-phosphate oxidase / oxidoreductase,
NAD-dependent - Colwellia psychrerythraea (strain 34H /
ATCC BAA-681) (Vibriopsychroerythus)
Length = 558
Score = 33.1 bits (72), Expect = 9.0
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 206 PKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGD 382
P+++ ++ + I EL+ LK Q LA G+G KN V + + P+++G+
Sbjct: 171 PRYSESEIESLIIPLTNELSDLKAQLKTQQLASSSGEGLSKNSAVAKVSLPDYPKISGE 229
>UniRef50_O69824 Cluster: Putative uncharacterized protein SCO6430;
n=1; Streptomyces coelicolor|Rep: Putative
uncharacterized protein SCO6430 - Streptomyces
coelicolor
Length = 630
Score = 33.1 bits (72), Expect = 9.0
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 390 PAISPATSGVLTIRTPPL-SPFLKVPFPRPPARTCA 286
PA P SGV + P +P L+VP+P PART A
Sbjct: 525 PAHKPPVSGVPALEAPAAETPALEVPYPDTPARTGA 560
>UniRef50_Q1I3D8 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas entomophila L48|Rep: Putative
uncharacterized protein - Pseudomonas entomophila
(strain L48)
Length = 339
Score = 33.1 bits (72), Expect = 9.0
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 224 KTKDEAIKFA-TELNTKDIVLKAQVLAGGRGKGTFK 328
KT DE I+ T LNT +IVL Q L R KG FK
Sbjct: 126 KTNDEEIRNTFTRLNTNNIVLNDQELRNARYKGLFK 161
>UniRef50_Q18UC2 Cluster: Cyanophycin synthetase; n=2;
Desulfitobacterium hafniense|Rep: Cyanophycin synthetase
- Desulfitobacterium hafniense (strain DCB-2)
Length = 885
Score = 33.1 bits (72), Expect = 9.0
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 179 LLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKG-TFKNGLKGGVR 352
LL + GIPVP V + +DEA++ +L D ++ + G +GKG T K G + VR
Sbjct: 222 LLYEGGIPVPDGVVTRNEDEAVEVFRQL---DRLVVVKPYNGNQGKGVTLKLGTEAEVR 277
>UniRef50_A5DPX5 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 413
Score = 33.1 bits (72), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 508 HNCHVVFPAWELPLCDHDHVANSSCC 431
H C F W +P C H H +NS CC
Sbjct: 343 HGCTNTFTDWRIP-CFHSHFSNSLCC 367
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,773,035
Number of Sequences: 1657284
Number of extensions: 16500224
Number of successful extensions: 47529
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 45214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47307
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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