Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D08
(725 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q10F22 Cluster: OB-fold nucleic acid binding domain con... 40 0.047
UniRef50_UPI00004D98ED Cluster: C16orf75 protein.; n=2; Xenopus ... 38 0.33
UniRef50_O15564 Cluster: Methionine gamma-lyase; n=2; Trichomona... 36 0.77
UniRef50_Q96E14 Cluster: OB DNA-binding domain-containing protei... 36 0.77
UniRef50_A7PQL1 Cluster: Chromosome chr6 scaffold_25, whole geno... 35 1.8
UniRef50_UPI0000EB3463 Cluster: C16orf75 protein.; n=1; Canis lu... 35 2.4
UniRef50_A3J3E7 Cluster: Uroporphyrinogen-III synthase; n=1; Fla... 34 3.1
UniRef50_A7Q4L0 Cluster: Chromosome chr10 scaffold_50, whole gen... 34 3.1
UniRef50_Q3XZ14 Cluster: Glycoside hydrolase, family 42, small c... 33 5.4
UniRef50_O94350 Cluster: Cystathionine beta-lyase; n=27; cellula... 33 5.4
UniRef50_UPI0000545A4A Cluster: PREDICTED: hypothetical protein;... 33 7.2
UniRef50_A0J7N6 Cluster: Transcriptional regulator, AraC family;... 33 7.2
UniRef50_A7EV26 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_Q10F22 Cluster: OB-fold nucleic acid binding domain
containing protein, expressed; n=2; Oryza sativa|Rep:
OB-fold nucleic acid binding domain containing protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 175
Score = 40.3 bits (90), Expect = 0.047
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Frame = +1
Query: 244 VWLQGTIEQTVGRD---ILIISDTFGRAKITKC-ETADGVIDKNSIKKGTYCCIIGTAVK 411
VWLQG + RD +++ D A+IT + A+G ++G Y ++G+
Sbjct: 66 VWLQGVVVLADYRDGAGHILVDDGSCVAEITLTPKEAEG----QPWREGMYVMVLGSYSG 121
Query: 412 TKGVPE-----VQAYKFIDLSSQPEMKSSWEIEVNEA-NLF 516
+ +P ++ +K +DLS+QP+ +S W +EV EA N F
Sbjct: 122 KESLPRANRPVIKVHKLVDLSAQPDRESMWYMEVVEAFNFF 162
>UniRef50_UPI00004D98ED Cluster: C16orf75 protein.; n=2; Xenopus
tropicalis|Rep: C16orf75 protein. - Xenopus tropicalis
Length = 150
Score = 37.5 bits (83), Expect = 0.33
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 244 VWLQGTIEQTVGRD---ILIISDTFGRAKITKCETADGVIDKNSIKKGTYCCIIGTAVKT 414
VW+QGT+ Q V D L ++DT T C K+ ++ G Y ++G + +
Sbjct: 58 VWMQGTVIQ-VRPDRGTTLRLNDT--THTFTVCGADKVPKGKHCLEIGKYVMVMGVVLSS 114
Query: 415 KGVPEVQAYKFIDLSSQPEMKSSWEIEVN 501
P ++A K DLS P W+ EV+
Sbjct: 115 SPEPILRAVKITDLSDNPVHSRMWKHEVD 143
>UniRef50_O15564 Cluster: Methionine gamma-lyase; n=2; Trichomonas
vaginalis|Rep: Methionine gamma-lyase - Trichomonas
vaginalis
Length = 396
Score = 36.3 bits (80), Expect = 0.77
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 296 IIKISRPTVCSIVPCNHTSMGVGLFMRSLIKYFLGHIDILIGLYC 162
++ I+ T CS + N GV + + S KY GH D++ GL C
Sbjct: 179 VLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLIC 223
>UniRef50_Q96E14 Cluster: OB DNA-binding domain-containing protein
C16orf175; n=15; Euteleostomi|Rep: OB DNA-binding
domain-containing protein C16orf175 - Homo sapiens
(Human)
Length = 147
Score = 36.3 bits (80), Expect = 0.77
Identities = 24/87 (27%), Positives = 36/87 (41%)
Frame = +1
Query: 244 VWLQGTIEQTVGRDILIISDTFGRAKITKCETADGVIDKNSIKKGTYCCIIGTAVKTKGV 423
VW+QG + R + D G + E + + G Y ++G
Sbjct: 58 VWMQGRVVMA-DRGEARLRDPSGDFSVRGLERVPR--GRPCLVPGKYVMVMGVVQACSPE 114
Query: 424 PEVQAYKFIDLSSQPEMKSSWEIEVNE 504
P +QA K DLS P +S WE+EV +
Sbjct: 115 PCLQAVKMTDLSDNPIHESMWELEVED 141
>UniRef50_A7PQL1 Cluster: Chromosome chr6 scaffold_25, whole genome
shotgun sequence; n=4; core eudicotyledons|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 134
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 KKGTYCCIIGTAVKTKGVPE-VQAYKFIDLSSQPEMKSSWEIEVNEA 507
K G Y ++G G P ++ +K +DLS P+ +S W +EV EA
Sbjct: 77 KIGMYVMVVGGYFVRSGEPPMIKVHKIVDLSPFPDRESMWYLEVIEA 123
>UniRef50_UPI0000EB3463 Cluster: C16orf75 protein.; n=1; Canis lupus
familiaris|Rep: C16orf75 protein. - Canis familiaris
Length = 86
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 373 KGTYCCIIGTAVKTKGVPEVQAYKFIDLSSQPEMKSSWEIEVNE 504
+G Y ++G P +QA K DLS P ++ WE+EV +
Sbjct: 37 RGKYVMVMGVVQVCSPEPCLQAVKMTDLSDNPVHENMWELEVED 80
>UniRef50_A3J3E7 Cluster: Uroporphyrinogen-III synthase; n=1;
Flavobacteria bacterium BAL38|Rep: Uroporphyrinogen-III
synthase - Flavobacteria bacterium BAL38
Length = 222
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 352 IDKNSIKKGTYCCIIGTAVKT-KGVPEVQAYKFIDLSSQPEMKS 480
++ N+++ T CI T KT + +PEV YK I ++SQP +++
Sbjct: 169 LENNTLENKTCFCIGTTTAKTLENIPEVSGYKNIIIASQPTVEN 212
>UniRef50_A7Q4L0 Cluster: Chromosome chr10 scaffold_50, whole genome
shotgun sequence; n=22; Vitis vinifera|Rep: Chromosome
chr10 scaffold_50, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1113
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 211 KDLINKPTPIDVWLQGTIEQTVGRDILIISDTFGRAKITKCETADGVIDKNSIKKG 378
+D + PTPID WL GT E+ + +L ++ FG + + + G++ K + G
Sbjct: 800 RDNMEIPTPIDSWLPGTHEKISHQQLLYATNDFGEDNLIG-KGSQGMVYKGVLSNG 854
>UniRef50_Q3XZ14 Cluster: Glycoside hydrolase, family 42, small
chain, N-terminal:Glycoside hydrolase, family 42, small
chain, C-terminal:Glycoside hydrolase family 2,
immunoglobulin-like beta-sandwich domain:Glycoside
hydrolase, family 2, TIM barrel domain:Glycoside
hydrolase, family 2, sugar binding; n=1; Enterococcus
faecium DO|Rep: Glycoside hydrolase, family 42, small
chain, N-terminal:Glycoside hydrolase, family 42, small
chain, C-terminal:Glycoside hydrolase family 2,
immunoglobulin-like beta-sandwich domain:Glycoside
hydrolase, family 2, TIM barrel domain:Glycoside
hydrolase, family 2, sugar binding - Enterococcus
faecium DO
Length = 993
Score = 33.5 bits (73), Expect = 5.4
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 357 INNPVSRFTFGDFCSSKRIGNY*NIAAYSLFDCSLQPYIDGSRFVYEVFN 208
I++P+ + + N A S F+ SL+ YIDG + VYEV N
Sbjct: 598 IHSPIQLIAVDEELQEVTLSNITAFTAGSAFNLSLEWYIDGKKTVYEVMN 647
>UniRef50_O94350 Cluster: Cystathionine beta-lyase; n=27; cellular
organisms|Rep: Cystathionine beta-lyase -
Schizosaccharomyces pombe (Fission yeast)
Length = 390
Score = 33.5 bits (73), Expect = 5.4
Identities = 24/108 (22%), Positives = 45/108 (41%)
Frame = -1
Query: 329 LVIFARPNVSEIIKISRPTVCSIVPCNHTSMGVGLFMRSLIKYFLGHIDILIGLYCRANG 150
+V R + + + T+ S V CN G + S KY GH D++ G+ +
Sbjct: 161 IVKITRSKAKDALLVMDNTMLSPVLCNPLDFGYDIVYESATKYLSGHHDLMGGVIATKSD 220
Query: 149 R*AAY*VSFNCFIKLRKIGSRWAYFINFIFLQLLYFIVLLTSRIYSSA 6
++ + F + +G+ A F F+ L+ + + L R +A
Sbjct: 221 E-----IAKSVFFNINAMGAAMAPFECFLLLRGIKTMGLRVERAQQNA 263
>UniRef50_UPI0000545A4A Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 148
Score = 33.1 bits (72), Expect = 7.2
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 244 VWLQGTI-EQTVGRDILIISDTFGRAKITKCETADGVIDKNSIKKGTYCCIIGTAVKTKG 420
VW+QGT+ E + L++ D G + + K + G Y ++G
Sbjct: 56 VWMQGTVLELQADNNTLLMLDETGNFTVNGINSVPK--GKPCLSPGKYVMVMGVIQSHSP 113
Query: 421 VPEVQAYKFIDLSSQPEM-KSSWEIEVNE 504
P ++A K DLS+ + + +W EV +
Sbjct: 114 EPVLRAVKMADLSANAAIHRRNWIYEVED 142
>UniRef50_A0J7N6 Cluster: Transcriptional regulator, AraC family;
n=3; Gammaproteobacteria|Rep: Transcriptional regulator,
AraC family - Shewanella woodyi ATCC 51908
Length = 271
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 208 IKDLINKPTPIDVWLQGTIEQTVGRDILIISDTFGRAKI 324
IK L NK TPI++ + T+ Q + ++I+ SDT R +I
Sbjct: 104 IKTLANKETPIEMLFEKTVAQDLEQEIIQASDTKQRIEI 142
>UniRef50_A7EV26 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 935
Score = 32.7 bits (71), Expect = 9.5
Identities = 22/105 (20%), Positives = 46/105 (43%)
Frame = +1
Query: 241 DVWLQGTIEQTVGRDILIISDTFGRAKITKCETADGVIDKNSIKKGTYCCIIGTAVKTKG 420
+VW + + + + R + I+ G A ITK + D + K+ ++G +
Sbjct: 138 EVWRKSQLSRELERLLPILEPGSGSADITKRKRLDSDVQLG--KRPVL--VVGQSDSPIS 193
Query: 421 VPEVQAYKFIDLSSQPEMKSSWEIEVNEANLFLEGKLIPNIEDCH 555
VP+ ++ +S P+ KS ++I+ + G + N + H
Sbjct: 194 VPDNESQTRTSISGWPDQKSDFQIQEEALSPMAAGSSMENFSNAH 238
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,092,697
Number of Sequences: 1657284
Number of extensions: 13425460
Number of successful extensions: 31788
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 30729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31779
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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