Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_D08
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    25   0.47 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.7  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 120 VKTYSIRCLSTICSAIQTY*YVNMSKEIL 206
           +K YS+  +ST    I TY + N + EIL
Sbjct: 170 MKKYSVDIISTCAFGINTYCFRNDNSEIL 198


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 128 SFNCFIKLRKIGSRWAYFINFIFLQLLYFIVLLTSRIYS 12
           SF    +   I S+   F+N IFL +    ++L+S I++
Sbjct: 4   SFQYINRSELITSKIVSFVNSIFLVMSAVTIILSSLIFN 42


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 267 TDCRPRYFNNFRYVWTSKN 323
           T C  +  N FRY W + N
Sbjct: 219 TQCPIQQGNTFRYQWIAGN 237


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 267 TDCRPRYFNNFRYVWTSKN 323
           T C  +  N FRY W + N
Sbjct: 219 TQCPIQQGNTFRYQWIAGN 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,835
Number of Sequences: 336
Number of extensions: 3909
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)