Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D07
(659 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 117 1e-26
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 65 4e-11
SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10) 46 2e-05
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 34 0.12
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 33 0.27
SB_8164| Best HMM Match : rve (HMM E-Value=0.00069) 30 1.9
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 2.5
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_30477| Best HMM Match : Metallothionein (HMM E-Value=8.3) 29 3.4
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 4.4
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15) 29 4.4
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 29 4.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 4.4
SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 28 5.9
SB_30396| Best HMM Match : M20_dimer (HMM E-Value=4e-08) 28 5.9
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 28 7.7
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_23583| Best HMM Match : TSP_1 (HMM E-Value=0.095) 28 7.7
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 123 bits (296), Expect = 1e-28
Identities = 58/100 (58%), Positives = 75/100 (75%)
Frame = +3
Query: 360 MGCAQXXXXXXXXXXXKLIDKNLKENGIQASKDIKLLLLGAGESGKSTIVKQMKIIHESG 539
MGC K+IDKNL+ +G +A++++KLLLLGAGESGKSTIVKQMKIIHE G
Sbjct: 1 MGCTLSAEDKAAAERSKMIDKNLRADGERAAREVKLLLLGAGESGKSTIVKQMKIIHEHG 60
Query: 540 FTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNXDR 659
++ E+ QY+ VVYSNTIQS++AI+RAM L I +G+ DR
Sbjct: 61 YSTEECTQYKQVVYSNTIQSMIAIIRAMGTLKIEFGHPDR 100
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 117 bits (281), Expect = 1e-26
Identities = 57/100 (57%), Positives = 70/100 (70%)
Frame = +3
Query: 360 MGCAQXXXXXXXXXXXKLIDKNLKENGIQASKDIKLLLLGAGESGKSTIVKQMKIIHESG 539
MGC K I+KNLK G +A +D+KLLLLGAGESGKSTIVKQM+IIH+ G
Sbjct: 1 MGCTLSAEERAAIARSKAIEKNLKLEGARAERDVKLLLLGAGESGKSTIVKQMRIIHDHG 60
Query: 540 FTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNXDR 659
F+ ED+ QYRP+V+SNTI SL+ I+RAM L I + N R
Sbjct: 61 FSPEDYIQYRPLVFSNTIYSLLTIIRAMDKLRIDFENDAR 100
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/77 (46%), Positives = 55/77 (71%)
Frame = +3
Query: 414 IDKNLKENGIQASKDIKLLLLGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTI 593
I+K ++++ +++KLLLLG GESGKST +KQM+IIH G+++ED + Y P+VY N I
Sbjct: 19 IEKQIRQDKRNQRRELKLLLLGTGESGKSTSIKQMRIIHGQGYSDEDKRGYIPLVYQNII 78
Query: 594 QSLVAILRAMPNLGIIY 644
++ ++ RAM L I Y
Sbjct: 79 TAMHSLTRAMETLKIPY 95
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/97 (37%), Positives = 53/97 (54%)
Frame = +3
Query: 348 RTADMGCAQXXXXXXXXXXXKLIDKNLKENGIQASKDIKLLLLGAGESGKSTIVKQMKII 527
R A C + IDK + + Q + +K+LLLGAGESGKST +KQM+II
Sbjct: 208 RYAPPRCCLTQEEAEQRAQSQKIDKQIAQEKAQLRRQVKILLLGAGESGKSTFLKQMRII 267
Query: 528 HESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGI 638
+ F + ++Y+PVVYSN ++ + + A L I
Sbjct: 268 YGKDFDADALQEYKPVVYSNILKGMKVLADARRKLRI 304
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +3
Query: 414 IDKNLKENGIQASKDIKLLLLGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTI 593
ID L + + S++I+LL L +G SGKST +KQ+KI+++ GF ++ +YRP VY
Sbjct: 26 IDALLDQERERKSQEIQLLTLVSGNSGKSTFIKQLKIVYDDGFNEKERLEYRPQVYRLLA 85
Query: 594 QSLVAILRAMPNLGIIYGNXD 656
++ I RA+ LG+ + + D
Sbjct: 86 GNIAKITRAVEQLGLHFNSHD 106
>SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +3
Query: 495 KSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNXD 656
KST +KQ+KI+++ GF ++ +YRP VY ++ I RA+ LG+ + + D
Sbjct: 2 KSTFIKQLKIVYDDGFNEKERLEYRPQVYRLLAGNIAKITRAVEQLGLHFNSHD 55
>SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10)
Length = 290
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 477 GAGESGKSTIVKQMKIIHE-SGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNL 632
GAGESGKSTIVKQM+I+H+ GFT + +Q + N +++ I AM L
Sbjct: 156 GAGESGKSTIVKQMRILHDVHGFTELEKRQKIEDIKKNIRDAILTITGAMSTL 208
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 355 AVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPAL 248
A LP L P + PTP P P LYT P A A+
Sbjct: 143 AFLPPLAPSSGPTPSPPPTKPQEDPTLYTEPCANAV 178
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = -2
Query: 373 WAHPISAVLP--MLWPQAAP-TPEPGALSPISQHALYTRP---VAPAL--PEPPYTILAP 218
W P A LP + PQAAP TP GA P ++ P V P + P PP +++AP
Sbjct: 287 WVTPHPATLPVTLFTPQAAPVTPPMGAQLPETEQPQMVAPSSTVTPPVTEPAPPSSVVAP 346
>SB_8164| Best HMM Match : rve (HMM E-Value=0.00069)
Length = 1117
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -1
Query: 386 LFGRLGAPHIGSSPYAMAAGRPDSRAGRALTDLSACALHASCRSGTTGATLHDISTQYTN 207
L L + +I ++ G R GR L L+ ALH + T GA+ H+++TQ N
Sbjct: 529 LHNDLVSDYIINNELRTLCGSLSLRCGR-LMSLALGALHVARHVNTNGASTHELATQMRN 587
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -2
Query: 322 PTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNTRT*QY 197
P EP +P AL + P P P P T P TRT QY
Sbjct: 46 PLREPPTPAPTPPPALPSTPTLPLAPRPRPTASQPTTRT-QY 86
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 361 ISAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAP 218
++A PML P AP P P A H++ + P PP + P
Sbjct: 1385 MAAPAPMLAPMLAPMPAPCAPPECHTHSVQVKQTHHMAPAPPPPMAFP 1432
>SB_30477| Best HMM Match : Metallothionein (HMM E-Value=8.3)
Length = 178
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = -3
Query: 495 CPIRQHLTTIA*CLLMPEYHSLSSSYRSICFEQPLHALRPTGRTPYRQFSL 343
C + + + C+ EY Y +C E +H PTG P Q L
Sbjct: 107 CQVEYCMCQVEYCMCQVEYCMYQVEY-CMCLENSIHTPLPTGNPPLLQLKL 156
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2
Query: 328 AAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNT 212
AAP L + Q A VAP P+ P T LAP T
Sbjct: 178 AAPVTTMKLLLCLRQQAASETTVAPETPDAPATTLAPET 216
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 364 PISAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 236
P+ P QA+ TP+P A +P + + +RP+ LP PP
Sbjct: 35 PLECTEPSSVLQASITPKP-ATAPTTTTQVRSRPLPTILPAPP 76
>SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15)
Length = 794
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -2
Query: 334 PQAAPTPEPG--ALSPISQHALYTRPVAPALPEPPYTILAPNTR 209
PQ PE +L P+S H+++ P++ PP ++ P+ R
Sbjct: 602 PQVGSYPEGSFPSLPPVSSHSMFQHQPHPSMACPPTMMVTPDGR 645
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 495 KSTIVKQMKIIHESGFTNEDFKQYRPVV 578
KS I + +H SG +E FKQYR V
Sbjct: 997 KSLIASRQAALHNSGKESEAFKQYRNAV 1024
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 334 PQAAPTPEPGALSPISQHALYTRPVAPALPEPP 236
P AP+P P SP ++ P+APA PP
Sbjct: 120 PSQAPSPPPPPTSPATRAPPPPPPIAPATGGPP 152
>SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)
Length = 233
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = -2
Query: 322 PTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNTRT*QY 197
P P PG +P + +P P PP L P + Y
Sbjct: 123 PPPPPGVFTPPPPYRTTAKPKGPTKKPPPMMSLTPTPKKKHY 164
>SB_30396| Best HMM Match : M20_dimer (HMM E-Value=4e-08)
Length = 489
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 315 GVGAACGHSIGRTADMGCA 371
G+G ACGH++ A +GCA
Sbjct: 182 GIGHACGHNLISEAGVGCA 200
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 334 PQAAPTPEPGALSPISQHALYTRPVAPALPEPPYTILAPNT 212
P A+P P P A+ P H + + P A P P + AP T
Sbjct: 344 PAASPAPSPSAVKPF--HPVSSAPSAIKFPAKP-NVPAPGT 381
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 444 QASKDIKLLLLGAGESGKSTIVKQM 518
+ +++++LLLG SGK+TI+K +
Sbjct: 13 EKDREMRILLLGLDNSGKTTILKSL 37
>SB_23583| Best HMM Match : TSP_1 (HMM E-Value=0.095)
Length = 520
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2
Query: 254 RSDRTRVERMLRDR*ERARLGSRGGLRP*HRENCRYGVRPVGRRACS 394
+S + ER ++ + L G P H+ C++ V+P + AC+
Sbjct: 48 KSGKPDTERKCNEQPCASELNQNGVYEPVHKIQCKHAVQPSTQEACN 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,300,441
Number of Sequences: 59808
Number of extensions: 449655
Number of successful extensions: 1936
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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