Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D05
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 197 8e-51
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 172 2e-43
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 128 5e-30
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 124 7e-29
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 124 7e-29
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 124 7e-29
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 122 4e-28
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical p... 29 2.6
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 28 6.0
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 28 6.0
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 6.0
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 28 6.0
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 28 7.9
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 7.9
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 7.9
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 197 bits (480), Expect = 8e-51
Identities = 99/198 (50%), Positives = 138/198 (69%)
Frame = +2
Query: 146 VRNFSNSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTN 325
VR S ++A S I NVT+IG GLMGSGIAQVSA A NVT+VD + AL KA++ I +
Sbjct: 10 VRGLS-TTAQLSKINNVTIIGAGLMGSGIAQVSANAKLNVTVVDSNQSALEKAQQGIANS 68
Query: 326 LSRVAKKMYKDNPQEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQ 505
L RVAKK + D+ V+ L RI +T+ +++ K ADLV+EAIVENI +K KLF +
Sbjct: 69 LKRVAKKKHADDAAAQTALVSSVLDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAE 128
Query: 506 LDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEAT 685
++ A T+ +NTSSL + +I +K K +FGGLHFFNPVP+M+LL VV+ +ETS+AT
Sbjct: 129 VEVAAKPTTLITTNTSSLRLADIGLNLKDKSRFGGLHFFNPVPMMKLLEVVRHTETSDAT 188
Query: 686 YKTMMEWGKSXGKTCITC 739
+ ++++GK+ GKT + C
Sbjct: 189 FNQLVDYGKTVGKTTVAC 206
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 172 bits (419), Expect = 2e-43
Identities = 83/195 (42%), Positives = 129/195 (66%)
Frame = +2
Query: 155 FSNSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSR 334
F+ AMQ+ I+NV ++G G MGSGIAQV+A +G NV L DV+ AL +A K+I +++
Sbjct: 2 FTAKCAMQN-IRNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMKAISQSVTH 60
Query: 335 VAKKMYKDNPQEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDG 514
++KK K +E FV ++ RI T + + A ADL++EA +ENI +K +F Q++
Sbjct: 61 LSKKQ-KGTDKEKSDFVTLTMSRIKTCNNVSTAVADADLIIEAAIENIDLKRGIFAQIEQ 119
Query: 515 VAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEATYKT 694
+I +NTSS + ++A ++ K +FGGLHFFNPVPVM+LL V++ +TS+ TY T
Sbjct: 120 SCKKDSILTTNTSSFLLEDVAKGLQDKTRFGGLHFFNPVPVMKLLEVIRSDDTSDETYAT 179
Query: 695 MMEWGKSXGKTCITC 739
++++G + GKT + C
Sbjct: 180 LIKFGTAVGKTTVAC 194
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 128 bits (308), Expect = 5e-30
Identities = 69/180 (38%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Frame = +2
Query: 194 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQE- 370
V + G G+MGSGIAQV QAG V L S L +A+++I NL RVA K D P E
Sbjct: 13 VAIFGAGMMGSGIAQVCLQAGYPVNLYGRSEKKLLEARETIKKNLIRVASKKKTDVPMEP 72
Query: 371 --VEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 544
+E+ L + TD A++ A + +EA+ EN+ +K +F+ + P + + +
Sbjct: 73 AALEEIAQIQLDLLQIHTDIPSAAEDAAMAIEAVAENLDLKLDIFQTIQKTCPQNCMLIT 132
Query: 545 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEATYKTMMEWGKSXGK 724
NTSSL ++++ V++ F GLHFFNPVPVM+L+ VV ETS T + + K K
Sbjct: 133 NTSSLKLSQMLPVIQNPALFAGLHFFNPVPVMKLVEVVSTDETSPETTNFLFNFCKEIKK 192
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 124 bits (299), Expect = 7e-29
Identities = 66/183 (36%), Positives = 107/183 (58%)
Frame = +2
Query: 185 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 364
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 378 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 436
Query: 365 QEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 544
E E+ N + I+ + A K+AD+V+EA+ E++ +KHK+ KQ++ V +TI AS
Sbjct: 437 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 491
Query: 545 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEATYKTMMEWGKSXGK 724
NTS+L I +IA+ R DK G+H+F+PV M+LL ++ TS+ T T + G GK
Sbjct: 492 NTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 551
Query: 725 TCI 733
+
Sbjct: 552 LVV 554
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 124 bits (299), Expect = 7e-29
Identities = 66/183 (36%), Positives = 107/183 (58%)
Frame = +2
Query: 185 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 364
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 352 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 410
Query: 365 QEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 544
E E+ N + I+ + A K+AD+V+EA+ E++ +KHK+ KQ++ V +TI AS
Sbjct: 411 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 465
Query: 545 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEATYKTMMEWGKSXGK 724
NTS+L I +IA+ R DK G+H+F+PV M+LL ++ TS+ T T + G GK
Sbjct: 466 NTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 525
Query: 725 TCI 733
+
Sbjct: 526 LVV 528
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 124 bits (299), Expect = 7e-29
Identities = 66/183 (36%), Positives = 107/183 (58%)
Frame = +2
Query: 185 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 364
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 378 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 436
Query: 365 QEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 544
E E+ N + I+ + A K+AD+V+EA+ E++ +KHK+ KQ++ V +TI AS
Sbjct: 437 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 491
Query: 545 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEATYKTMMEWGKSXGK 724
NTS+L I +IA+ R DK G+H+F+PV M+LL ++ TS+ T T + G GK
Sbjct: 492 NTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 551
Query: 725 TCI 733
+
Sbjct: 552 LVV 554
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 122 bits (293), Expect = 4e-28
Identities = 64/183 (34%), Positives = 106/183 (57%)
Frame = +2
Query: 185 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 364
+ + V+G G MG+GIA V+ G L+D + + + + + T+L+R K+ K +
Sbjct: 352 VNEIAVVGAGFMGAGIANVTINKGIRTVLLDANQAGVERGQNHVATHLNRQLKRQ-KISK 410
Query: 365 QEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 544
E EK N + I+ + A K+AD+V+EA+ E++ +KHK+ +Q++ V +TI AS
Sbjct: 411 LEREKIYNHLVPTIDYS-----AMKNADVVIEAVFEDLPLKHKVIRQIENVVGPNTIIAS 465
Query: 545 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEATYKTMMEWGKSXGK 724
NTS+L I +IA+ R DK G+H+F+PV M+LL ++ TS+ T T + G GK
Sbjct: 466 NTSALPIKDIAAASSRSDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 525
Query: 725 TCI 733
+
Sbjct: 526 LVV 528
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 111 bits (268), Expect = 4e-25
Identities = 67/180 (37%), Positives = 101/180 (56%)
Frame = +2
Query: 185 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 364
IK+V VIGGG MG GIA +G LV+V+N A K + R K + N
Sbjct: 39 IKSVAVIGGGTMGRGIAIAFCLSGFETYLVEVNNKAAEFCKNELEITYKR-EKAFRRLND 97
Query: 365 QEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 544
+VEK + + TD + + + DL+VEA+ E++ +K +LF +LD + IF +
Sbjct: 98 SKVEKLRKN----LQITTDFQKLN-NCDLIVEAVFEDMKLKKELFTKLDKICKPSCIFGT 152
Query: 545 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEATYKTMMEWGKSXGK 724
NTSSL +NE++SV++ K G+HFFNP ++R++ V+ GS+TS T E +S K
Sbjct: 153 NTSSLDLNEMSSVLRDPTKVVGIHFFNPANLIRMVEVIYGSKTSSKAVATAFEACRSIKK 212
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 99.1 bits (236), Expect = 3e-21
Identities = 64/189 (33%), Positives = 104/189 (55%)
Frame = +2
Query: 158 SNSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRV 337
+NS A + +V +IGGG MG +A AG LV V N+ K + + +
Sbjct: 32 TNSEAYD--VNSVAIIGGGTMGKAMAICFGLAGIETFLV-VRNEQRCKQELEVMYAREKS 88
Query: 338 AKKMYKDNPQEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGV 517
K++ N + +EK +N +L +D + S + DL+VE+++E++ +K +LF L+ +
Sbjct: 89 FKRL---NDKRIEK-INANL---KITSDFHKLS-NCDLIVESVIEDMKLKKELFANLENI 140
Query: 518 APSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLXVVKGSETSEATYKTM 697
S IF +NTSSL +NEI+SV++ G+HFFNP V+RL+ ++ GS TS T
Sbjct: 141 CKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATA 200
Query: 698 MEWGKSXGK 724
+ +S K
Sbjct: 201 FQACESIKK 209
>Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical
protein C35A5.3 protein.
Length = 460
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 347 MYKDNPQEVEKFVNDSLGRINTATDAAEASKSADLVVEAIVEN 475
+Y D+PQ+ ++ LGRI+ AA K+ D+ I+++
Sbjct: 204 IYIDDPQDSKRISGKELGRIHKNKSAAHLDKNGDIPYWKIIKS 246
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 188 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVD--VSNDALAKAKKSIGTNLSRV 337
KNV ++G G G I AQ +VTL+ + L ++ + + TN+ V
Sbjct: 171 KNVVIVGAGPSGIDITLQIAQTANHVTLISKKATYPVLPESVQQMATNVKSV 222
>Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical
protein K11H3.1b protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 116 DSKMMQFKVIVRNFSNSSAMQS-AIKNVTVIGGGLMGSGIAQV 241
+S + I R F +S + + + K VT+IG G GS IA++
Sbjct: 11 NSSRLSLSSIFRYFGTTSTIATMSPKKVTIIGSGNWGSAIARI 53
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 419 DAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVK 589
D ++KSADLVV I L L+ V HT A + + +E A +VK
Sbjct: 145 DGERSAKSADLVVRQIAAYNKNIEGLINHLNSVDRMHTEAAIEKPTYNRDETAKIVK 201
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 419 DAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVK 589
D ++KSADLVV I L L+ V HT A + + +E A +VK
Sbjct: 145 DGERSAKSADLVVRQIAAYNKNIEGLINHLNSVDRMHTEAAIEKPTYNRDETAKIVK 201
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 121 ENDAV*SYRKKFFKF-LCNAKCYQECNSYWRWSNGLRHSPGICPSR-TECY 267
EN+ + FF+ + K +Q C+ W ++GL SP +C SR C+
Sbjct: 1123 ENNCHNNGESNFFQCSMQTIKEWQVCDGRWDCADGLDESPEMCASRKARCF 1173
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.0
Identities = 29/106 (27%), Positives = 47/106 (44%)
Frame = +2
Query: 221 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEVEKFVNDSLG 400
G+ Q++A Q +L+ +S +A AK + S ++ V K + V+ S G
Sbjct: 681 GAQHGQITAYPRQLESLIRLS-EAHAKIRLSQEVSVDDVEKAFTLWREALKQSAVDPSTG 739
Query: 401 RINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIF 538
R++ A A+ S S VEA+ E + K K G S +F
Sbjct: 740 RVDVAILASGMSASGRKAVEAMCEAV---LKQLKTAKGFVTSKALF 782
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical
protein F59A2.1b protein.
Length = 884
Score = 27.9 bits (59), Expect = 7.9
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Frame = +2
Query: 152 NFSNSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVT----LVDVSNDALAKAKKSIG 319
NF+N +A ++ T G L G G+++ + A T S A K S G
Sbjct: 585 NFNNPAASTASPATSTTPGNSLFGGGLSKTESTASSTTTPSFMFAKNSESAFPKPTFSFG 644
Query: 320 TNL--SRVAKKMYKDNPQ-EVEKFVNDSLGRINTATDAAEASKSA 445
S A ++N Q E K V S AT AA ++ SA
Sbjct: 645 KQQTPSTTAPAKQEENKQSETPKSVFGSGFTSGGATFAALSANSA 689
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 27.9 bits (59), Expect = 7.9
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Frame = +2
Query: 152 NFSNSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVT----LVDVSNDALAKAKKSIG 319
NF+N +A ++ T G L G G+++ + A T S A K S G
Sbjct: 561 NFNNPAASTASPATSTTPGNSLFGGGLSKTESTASSTTTPSFMFAKNSESAFPKPTFSFG 620
Query: 320 TNL--SRVAKKMYKDNPQ-EVEKFVNDSLGRINTATDAAEASKSA 445
S A ++N Q E K V S AT AA ++ SA
Sbjct: 621 KQQTPSTTAPAKQEENKQSETPKSVFGSGFTSGGATFAALSANSA 665
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +2
Query: 464 IVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDK 601
++E + ++ L L+ +PS F + S+S+ ++ S+ + +DK
Sbjct: 12 LMERMELQELLIVSLESKSPSQAAFGAPFGSMSVADLGSLTRLEDK 57
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 663 PLTTXSKRITGTGLKK*RPPNLSFLFTTDA-ISFIDREDVFDAKIV 529
P T +++TG LKK RP + SF + DA I +D + KIV
Sbjct: 487 PTTCEPQQVTGRFLKKQRPASASFSCSLDANIDDVDPHALQVPKIV 532
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 663 PLTTXSKRITGTGLKK*RPPNLSFLFTTDA-ISFIDREDVFDAKIV 529
P T +++TG LKK RP + SF + DA I +D + KIV
Sbjct: 487 PTTCEPQQVTGRFLKKQRPASASFSCSLDANIDDVDPHALQVPKIV 532
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,346,548
Number of Sequences: 27780
Number of extensions: 346215
Number of successful extensions: 890
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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