Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D04
(577 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 182 5e-45
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 167 2e-40
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 158 8e-38
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 156 4e-37
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 147 1e-34
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 147 2e-34
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 143 2e-33
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 133 2e-30
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 133 2e-30
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 125 7e-28
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 122 6e-27
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 122 8e-27
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 120 2e-26
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 120 2e-26
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 113 2e-24
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 111 1e-23
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 111 1e-23
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 108 1e-22
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 108 1e-22
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 107 2e-22
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 105 6e-22
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 103 2e-21
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 101 1e-20
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 100 5e-20
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 96 5e-19
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 95 8e-19
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 88 2e-16
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 87 3e-16
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 85 1e-15
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 74 3e-12
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 69 8e-11
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 56 6e-07
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 50 4e-05
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q2R0W4 Cluster: AT hook motif-containing protein, putat... 33 3.6
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 182 bits (443), Expect = 5e-45
Identities = 85/134 (63%), Positives = 105/134 (78%)
Frame = +3
Query: 39 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 218
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 219 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 398
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 399 RILTTQGRRDLDRI 440
R LT QG+RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 167 bits (406), Expect = 2e-40
Identities = 72/130 (55%), Positives = 100/130 (76%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 410
Y+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T
Sbjct: 68 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127
Query: 411 TQGRRDLDRI 440
+QGRRDLD++
Sbjct: 128 SQGRRDLDQV 137
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 158 bits (384), Expect = 8e-38
Identities = 76/134 (56%), Positives = 98/134 (73%)
Frame = +3
Query: 39 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 218
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAI
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAI 60
Query: 219 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 398
LRH+YIR P G+ + K F +KRNGV PSH + GS+ RKA+Q +EAL L +K + GG
Sbjct: 61 LRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGG 119
Query: 399 RILTTQGRRDLDRI 440
R LT+ GRRDLDR+
Sbjct: 120 RSLTSAGRRDLDRL 133
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 156 bits (378), Expect = 4e-37
Identities = 71/134 (52%), Positives = 95/134 (70%)
Frame = +3
Query: 39 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 218
M V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 219 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 398
RHIY+R VGV + K++GG G+ PSH SGS+ RK +QSLE + ++EK +GG
Sbjct: 61 ARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGG 120
Query: 399 RILTTQGRRDLDRI 440
R ++ QG+RDLDRI
Sbjct: 121 RRISQQGQRDLDRI 134
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 147 bits (357), Expect = 1e-34
Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 20/150 (13%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 170
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 171 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 350
L PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R L
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNIL 127
Query: 351 QSLEALKLVEKVQDGGRILTTQGRRDLDRI 440
Q L+ + +++ GGR++T+QGRRDLD++
Sbjct: 128 QQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 147 bits (356), Expect = 2e-34
Identities = 69/117 (58%), Positives = 89/117 (76%), Gaps = 1/117 (0%)
Frame = +3
Query: 63 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 242
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 243 PVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 410
P GV + +++G KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 70 PTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 143 bits (347), Expect = 2e-33
Identities = 66/138 (47%), Positives = 96/138 (69%), Gaps = 4/138 (2%)
Frame = +3
Query: 39 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 218
+R VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASI 69
Query: 219 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK----V 386
R +Y+R GV ++ K++GG R GV HF ++SG + R LQ LE +K+VEK V
Sbjct: 70 ARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGV 129
Query: 387 QDGGRILTTQGRRDLDRI 440
GGR +T+ G++DLDRI
Sbjct: 130 NKGGRKITSHGQQDLDRI 147
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 133 bits (322), Expect = 2e-30
Identities = 60/128 (46%), Positives = 86/128 (67%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 410
YIR +G KI+G RKR G+ P +SSG + R +LQ LE L + EK + GGR +T
Sbjct: 72 YIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRIT 131
Query: 411 TQGRRDLD 434
++G+ ++D
Sbjct: 132 SKGQSEMD 139
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 133 bits (322), Expect = 2e-30
Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Frame = +3
Query: 45 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 224
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 225 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGR 401
+YIR GV T ++FGG +RNGV P+HF +G R L+ L+ LK++E GGR
Sbjct: 65 KVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGR 124
Query: 402 ILTTQGRRDLDRI 440
+T GRRDLDRI
Sbjct: 125 TITATGRRDLDRI 137
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 125 bits (302), Expect = 7e-28
Identities = 62/130 (47%), Positives = 81/130 (62%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
TV DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 410
YI PVG++ + +GGRK G P F ++ GSI RKALQ LEA +EKV GR++T
Sbjct: 63 YIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVT 122
Query: 411 TQGRRDLDRI 440
+GR LD+I
Sbjct: 123 PKGRSFLDKI 132
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 122 bits (294), Expect = 6e-27
Identities = 60/129 (46%), Positives = 83/129 (64%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
TV DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 410
YI PVGV ++ +GG+K G P F R SG+I R+ALQ LE L+++ ++ GR++T
Sbjct: 63 YIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVIT 121
Query: 411 TQGRRDLDR 437
+GR LD+
Sbjct: 122 PEGRSFLDK 130
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 122 bits (293), Expect = 8e-27
Identities = 57/129 (44%), Positives = 82/129 (63%)
Frame = +3
Query: 54 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 233
+KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 234 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 413
+ + +GV + + +G + PSH SG + R LQ LE + +V K+Q GR LT
Sbjct: 67 LNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTK 125
Query: 414 QGRRDLDRI 440
+GR+D+D+I
Sbjct: 126 EGRKDMDKI 134
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 120 bits (290), Expect = 2e-26
Identities = 60/137 (43%), Positives = 88/137 (64%), Gaps = 4/137 (2%)
Frame = +3
Query: 42 RSVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 212
+++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR A
Sbjct: 73 QNLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAA 132
Query: 213 AILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD 392
A+ RHIY+R VGV + K+ G K G P+H +SGS+ RK +QSLE + ++E ++
Sbjct: 133 AVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLEKIGVLEYDEE 192
Query: 393 -GGRILTTQGRRDLDRI 440
GGR +T G+RDLDRI
Sbjct: 193 KGGRRITQAGQRDLDRI 209
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 120 bits (289), Expect = 2e-26
Identities = 54/126 (42%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
Frame = +3
Query: 45 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 224
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LR
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLR 84
Query: 225 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGR 401
H+Y GV + K++ +KRNG P+H CR+SG I R +Q LE++ +E+ ++ GR
Sbjct: 85 HLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGR 144
Query: 402 ILTTQG 419
L+ +G
Sbjct: 145 RLSRKG 150
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 113 bits (273), Expect = 2e-24
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
T KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHL 77
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRIL 407
Y+R VGV ++K +G ++RNG +H +S I R L L++L LVE G R L
Sbjct: 78 YVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSLGLVEFNPNTGTRRL 137
Query: 408 TTQGRRDLDRI 440
+ QG+R+LD I
Sbjct: 138 SPQGQRELDSI 148
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 111 bits (266), Expect = 1e-23
Identities = 55/136 (40%), Positives = 80/136 (58%)
Frame = +3
Query: 33 GKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 212
GK + T+KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCA
Sbjct: 24 GKRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCA 83
Query: 213 AILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD 392
A+LR IY+R VG ++K FG +K G P H SS A +SL L LVE
Sbjct: 84 AVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGAQ 143
Query: 393 GGRILTTQGRRDLDRI 440
G+ LT +G + D +
Sbjct: 144 SGQRLTRKGHKFADSL 159
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 111 bits (266), Expect = 1e-23
Identities = 55/124 (44%), Positives = 77/124 (62%)
Frame = +3
Query: 63 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 242
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 243 PVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGR 422
PVGV + +GGR+ G P F + SG+I RK LQ LE LVEK ++ GR++T +GR
Sbjct: 67 PVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEE-GRVVTPEGR 125
Query: 423 RDLD 434
+D
Sbjct: 126 SLVD 129
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 108 bits (259), Expect = 1e-22
Identities = 62/124 (50%), Positives = 76/124 (61%)
Frame = +3
Query: 69 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 248
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH------- 208
Query: 249 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 428
V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RD
Sbjct: 209 ---------------RVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRD 253
Query: 429 LDRI 440
LDRI
Sbjct: 254 LDRI 257
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 108 bits (259), Expect = 1e-22
Identities = 57/130 (43%), Positives = 77/130 (59%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
TV DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 410
YI PVG++ + +GGRKR G P F + SG+I R AL LE L V+K ++ GR++T
Sbjct: 61 YIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTRE-GRVVT 119
Query: 411 TQGRRDLDRI 440
GR LD++
Sbjct: 120 PMGRSFLDKV 129
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 107 bits (256), Expect = 2e-22
Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRIL 407
Y+ P+GV+ + +GG K G P+ F + SGS+ RKALQ LEA L+ V D GR +
Sbjct: 63 YVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKV 120
Query: 408 TTQGRRDLDRI 440
+ G LD +
Sbjct: 121 SPAGMAFLDSV 131
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 105 bits (253), Expect = 6e-22
Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
TVKDV ++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-----VQDG 395
Y+R GV +T +FG NG S SG + R LQ LE +K+++K ++ G
Sbjct: 117 YVRGHWGVGNLTHMFGSVNDNGKHES----GSGKVIRYLLQQLETIKVLKKDNKSLLKKG 172
Query: 396 GRILTTQGRRDLDRI 440
RI+T +G++DL+RI
Sbjct: 173 SRIVTKEGQQDLNRI 187
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 103 bits (248), Expect = 2e-21
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Frame = +3
Query: 45 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 224
+ ++ D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILR
Sbjct: 25 NTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILR 84
Query: 225 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GR 401
H+Y G+ + +++ RKR G P+H C +SG I R +Q LEA +EK +D GR
Sbjct: 85 HLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGR 144
Query: 402 ILTTQG 419
L+ +G
Sbjct: 145 RLSRRG 150
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 101 bits (242), Expect = 1e-20
Identities = 56/131 (42%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Frame = +3
Query: 48 VTVKDVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 224
V +V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 225 HIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGR 401
+Y P+G++T I+GGR+ G P HF ++ GS+ RK LQ LE LV KV GR
Sbjct: 62 KLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGR 121
Query: 402 ILTTQGRRDLD 434
++ GR LD
Sbjct: 122 TISPAGRSLLD 132
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 99.5 bits (237), Expect = 5e-20
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Frame = +3
Query: 51 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 230
TVKDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 231 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG----- 395
Y++ G+ T+ IFG K G + G I R AL+SLE LK++ K ++
Sbjct: 69 YLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRKDKNSATKKF 128
Query: 396 GRILTTQGRRDLDRI 440
R++T +G +L+RI
Sbjct: 129 SRVITKEGMTELNRI 143
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 96.3 bits (229), Expect = 5e-19
Identities = 46/128 (35%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = +3
Query: 54 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 233
+KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 234 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILT 410
I +GV + + F ++R GV P+H +SG I R LQ LE + VE+ + GR LT
Sbjct: 110 IHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSILQQLENIGYVEQNPKKKGRRLT 169
Query: 411 TQGRRDLD 434
T+G ++
Sbjct: 170 TKGENAIN 177
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 95.5 bits (227), Expect = 8e-19
Identities = 47/129 (36%), Positives = 74/129 (57%)
Frame = +3
Query: 54 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 233
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 234 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 413
+ P+G+ + K +GG K +G +H + G+I R A+ LE L +EKV+ GRI++
Sbjct: 63 LHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIVSK 122
Query: 414 QGRRDLDRI 440
QG + LDR+
Sbjct: 123 QGMQKLDRL 131
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/128 (35%), Positives = 72/128 (56%)
Frame = +3
Query: 57 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 236
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 237 RSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQ 416
+ + +G + P H +S + R LQ LE LV +V + GR LT +
Sbjct: 74 HHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKAGLV-RVAEKGRQLTPK 132
Query: 417 GRRDLDRI 440
G++ LD+I
Sbjct: 133 GQKLLDQI 140
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 87.0 bits (206), Expect = 3e-16
Identities = 49/129 (37%), Positives = 68/129 (52%)
Frame = +3
Query: 48 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 227
V+VK V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRK 61
Query: 228 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 407
+YI +G+ ++ +GG+ G H S SI R LE+ LV+K Q GR L
Sbjct: 62 LYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQK-GRSL 120
Query: 408 TTQGRRDLD 434
+ QG LD
Sbjct: 121 SPQGMSLLD 129
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 84.6 bits (200), Expect = 1e-15
Identities = 41/123 (33%), Positives = 71/123 (57%)
Frame = +3
Query: 72 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 251
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 252 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 431
+ + +GG K G ++ ++ G+I R A+ LE L +EK+ GRI++ QG + L
Sbjct: 63 INGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKL 122
Query: 432 DRI 440
DR+
Sbjct: 123 DRL 125
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/127 (25%), Positives = 73/127 (57%)
Frame = +3
Query: 54 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 233
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 234 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 413
I +G + + +I+ G+K+ S SG I R +++ LE +K+++K + G L+
Sbjct: 65 IYKKLGTRQLVRIYNGKKKG--RRSKKTNGSGKIIRFSIKELEKMKILKKDESGRFGLSK 122
Query: 414 QGRRDLD 434
+ + ++D
Sbjct: 123 KAQNEID 129
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 68.9 bits (161), Expect = 8e-11
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Frame = +3
Query: 48 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 227
VT+ DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR
Sbjct: 14 VTIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRK 71
Query: 228 IYIRSPVGVKTVTKIFGGRKRN----GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG 395
+ P+G++ + +G +KR V P S + R +LQ+LE LV
Sbjct: 72 VAQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQALEEDGLVTTAAGE 131
Query: 396 GRILTTQGRRDLDRI 440
GR ++ G L +
Sbjct: 132 GRRISDDGEAFLSEV 146
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 56.0 bits (129), Expect = 6e-07
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Frame = +3
Query: 39 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKT-ARFKELAPYDPDWFYVRCAA 215
M VTVKDV Q + V+ +AA LKK+ VK+ EL P + C +
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSPNGWTQSSWPNVKSLPHTHELLPQ-----HSNCTS 55
Query: 216 IL---RHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 371
++ + + + P T + GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 56 VVVRGKGVGMLVPRPRSTEDR---GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 50.0 bits (114), Expect = 4e-05
Identities = 36/145 (24%), Positives = 65/145 (44%)
Frame = -3
Query: 437 SVKVSSTLCGENATTVLNFLNKLQCLQRLQSLACNTA**PAEM*RCNSITFAPTKDLGDS 258
SV++S +L + A +L + Q LQ L+ A +T AE+ ++++ DLG
Sbjct: 25 SVQISLSLRCQFAAAILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHG 84
Query: 257 LYSNR*ANVNMTKDGSTTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSSDSFNN 78
+ V + + GS++ +EP+ ++ S+LF L +H F S +
Sbjct: 85 ANPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGCQSSDE 144
Query: 77 LVLFNILYCDGTHLALCWQPEASAG 3
L+L ++ Y + H A P G
Sbjct: 145 LLLVHVFYSNSRHRAASALPARGKG 169
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 268 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 366
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_Q2R0W4 Cluster: AT hook motif-containing protein,
putative; n=6; Oryza sativa (japonica
cultivar-group)|Rep: AT hook motif-containing protein,
putative - Oryza sativa subsp. japonica (Rice)
Length = 1682
Score = 33.5 bits (73), Expect = 3.6
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 6 GRCFRLPTQGKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 185
GR +P+ ++ ++ V D +++ + + H K TG ++ E+ ++ L PY
Sbjct: 484 GRQHNMPSASEVAALIVNDTSENQKGRDIIVHYKDTGPRRISENHPKFMAMQYPLLFPYG 543
Query: 186 PDWF 197
D F
Sbjct: 544 EDGF 547
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,399,490
Number of Sequences: 1657284
Number of extensions: 9650218
Number of successful extensions: 24217
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 23476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24198
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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