Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_D03
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonse... 34 0.51
BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonse... 34 0.51
AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein. 34 0.51
AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonse... 34 0.51
AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonse... 34 0.51
AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein. 34 0.51
AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense t... 34 0.51
AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein. 34 0.51
Z98946-1|CAB46379.1| 577|Homo sapiens moesin protein. 32 1.6
M69066-1|AAA36322.1| 577|Homo sapiens moesin B protein. 32 1.6
BC017293-1|AAH17293.1| 577|Homo sapiens moesin protein. 32 1.6
AF295356-1|AAK71522.1| 527|Homo sapiens moesin/anaplastic lymph... 32 1.6
>BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 651
E+K++RLE+ ++K++ + KD K +KK E + + ER K +EQ + +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
>BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 651
E+K++RLE+ ++K++ + KD K +KK E + + ER K +EQ + +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
>AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein.
Length = 1272
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 651
E+K++RLE+ ++K++ + KD K +KK E + + ER K +EQ + +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
>AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 651
E+K++RLE+ ++K++ + KD K +KK E + + ER K +EQ + +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
>AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 651
E+K++RLE+ ++K++ + KD K +KK E + + ER K +EQ + +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
>AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein.
Length = 1272
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 651
E+K++RLE+ ++K++ + KD K +KK E + + ER K +EQ + +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
>AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense
transcripts 2 protein.
Length = 1272
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 651
E+K++RLE+ ++K++ + KD K +KK E + + ER K +EQ + +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
>AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein.
Length = 1298
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 651
E+K++RLE+ ++K++ + KD K +KK E + + ER K +EQ + +
Sbjct: 80 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 138
>Z98946-1|CAB46379.1| 577|Homo sapiens moesin protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 639
+ E+ + +EAE+ ++A+LQA +D KT ++ +S ++ R K + +
Sbjct: 385 EAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESE 441
>M69066-1|AAA36322.1| 577|Homo sapiens moesin B protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 639
+ E+ + +EAE+ ++A+LQA +D KT ++ +S ++ R K + +
Sbjct: 385 EAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESE 441
>BC017293-1|AAH17293.1| 577|Homo sapiens moesin protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 639
+ E+ + +EAE+ ++A+LQA +D KT ++ +S ++ R K + +
Sbjct: 385 EAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESE 441
>AF295356-1|AAK71522.1| 527|Homo sapiens moesin/anaplastic lymphoma
kinase fusion protein protein.
Length = 527
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 639
+ E+ + +EAE+ ++A+LQA +D KT ++ +S ++ R K + +
Sbjct: 385 EAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESE 441
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,454,259
Number of Sequences: 237096
Number of extensions: 970252
Number of successful extensions: 7469
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7454
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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