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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C24
         (718 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   260   1e-70
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   193   2e-50
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...   153   2e-38
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...   106   3e-24
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    77   3e-15
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    71   2e-13
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    68   2e-12
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po...    50   4e-07
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    46   5e-06
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb...    35   0.010
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual    29   0.50 
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch...    29   0.66 
SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr 2|||...    27   2.7  
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    27   3.5  
SPAC5H10.05c |||FAD binding oxidoreductasde |Schizosaccharomyces...    26   4.7  
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch...    25   8.2  
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy...    25   8.2  
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual    25   8.2  
SPAC1687.13c |csn5||COP9/signalosome complex subunit Csn5|Schizo...    25   8.2  

>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  260 bits (637), Expect = 1e-70
 Identities = 122/196 (62%), Positives = 145/196 (73%)
 Frame = +2

Query: 122 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 301
           IV DNGTGFVK G+A  NFP F FPS+VGRPI+RAE K G++ +KD+MVGDEA  +RS+L
Sbjct: 6   IVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLL 65

Query: 302 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMF 481
           +V YPMENG++R++E+M  +WDYTF   K+ +DP+  KILLTEPPMNP  NREKM E MF
Sbjct: 66  QVKYPMENGIIRDFEEMNQLWDYTFF-EKLKIDPRGRKILLTEPPMNPVANREKMCETMF 124

Query: 482 EKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIXGRD 661
           E+Y F   YVAIQAVL+LYAQGL            THI PVYE   L HL  RLD+ GRD
Sbjct: 125 ERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRD 184

Query: 662 ITRYLIKLLLLRGYAF 709
            TRYLI LLL +GYAF
Sbjct: 185 ATRYLISLLLRKGYAF 200


>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  193 bits (471), Expect = 2e-50
 Identities = 93/196 (47%), Positives = 126/196 (64%)
 Frame = +2

Query: 122 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 301
           +V DNG+G  K GFAG + P  +FPS+VGRP  R    +  +  KD  VGDEA   R +L
Sbjct: 8   LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHHGIMVGMGQKDSYVGDEAQSKRGIL 65

Query: 302 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMF 481
            + YP+E+G+V NW+DM  +W +TF  +++ V P+E   LLTE P+NP  NREKM +++F
Sbjct: 66  TLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPCLLTEAPLNPKSNREKMTQIIF 124

Query: 482 EKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIXGRD 661
           E +   + YVAIQAVL+LYA G             TH  P+YE +ALPH   RLD+ GRD
Sbjct: 125 ETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRD 184

Query: 662 ITRYLIKLLLLRGYAF 709
           +T YL+K+L+ RGY F
Sbjct: 185 LTDYLMKILMERGYTF 200


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score =  153 bits (371), Expect = 2e-38
 Identities = 73/199 (36%), Positives = 111/199 (55%)
 Frame = +2

Query: 122 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 301
           I  DNG+GF+K GFAG + P  +FP+ VGR  I+ E  +     KD+ VG EA  LR +L
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR--IKHERVMPSSIQKDMFVGSEAQNLRGLL 69

Query: 302 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMF 481
           ++  P+E G+++NW DM  +W Y +   ++N  P+E  +LLTEPP+   +N+EK+ E  +
Sbjct: 70  KIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFY 129

Query: 482 EKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIXGRD 661
           E     +   ++Q VL LYA               TH  P+Y+ F++P   ++ +I GRD
Sbjct: 130 ETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRD 189

Query: 662 ITRYLIKLLLLRGYAFXHS 718
           +T YL   L   G+    S
Sbjct: 190 VTDYLQLQLRKSGHELVSS 208


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score =  106 bits (255), Expect = 3e-24
 Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
 Frame = +2

Query: 122 IVCDNGTGFVKCGFAGSNFPAFIFPSMVG--------------RPIIRAENKIGDIDVK- 256
           I+ DNGTG+ K G+AG++ P+++FP+++               +P   A    G +  K 
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKR 67

Query: 257 -----DLMVGDEASKLRSM-LEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKI 418
                D  +G++A K  S    + YP+ +G + NW+ M   W  +     +  +P++   
Sbjct: 68  ATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLF-KYLRCEPEDHYF 126

Query: 419 LLTEPPMNPTKNREKMIEVMFEKYEFDSAYVAIQAVLTLYAQGL--------IXXXXXXX 574
           LLTEPP+NP +NRE   E+MFE +     Y+A+QAVL L A           +       
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186

Query: 575 XXXXTHICPVYEEFALPHLTRRLDIXGRDITRYLIKLL 688
               THI PV E + +    + + + GRD+T ++  LL
Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLL 224


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 77.0 bits (181), Expect = 3e-15
 Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
 Frame = +2

Query: 122 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 301
           +V DNG+  ++ G+ G   P  +F ++V R   R  ++   +   D ++     ++ S  
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRKLSRTSTLVGNDTLI-----EVGSRS 81

Query: 302 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMF 481
               P E  V+ NW+ M  V DYTF   K+ +D  E  I +TEP  NPT  R  M E++F
Sbjct: 82  IARSPFERNVISNWDLMEQVLDYTF--LKLGIDRMEHPICMTEPLANPTYVRSTMTELLF 139

Query: 482 EKYEFDSAYVAIQAVLTLY--AQGLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIXG 655
           E Y   S    I  + + Y   +              +H+ PV     +    +R+   G
Sbjct: 140 ELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGG 199

Query: 656 RDITRYLIKLLLLRGYAF 709
              + YL+KL  ++  +F
Sbjct: 200 SQSSSYLLKLFQIKYPSF 217


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 70.9 bits (166), Expect = 2e-13
 Identities = 46/167 (27%), Positives = 72/167 (43%)
 Frame = +2

Query: 122 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 301
           IV D G+ + + GF+G + P  + PS  G             D + L   +   K    +
Sbjct: 14  IVIDPGSKWTRIGFSGEDIPKCVLPSYCGE----------FSDGRRLFGEEYIYKSNPGM 63

Query: 302 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMF 481
           E+   + NG V NW+    +W Y     ++  +P E  IL+TEP  NP +NR K +E MF
Sbjct: 64  EIKNAIRNGWVENWDVTVDLWRYGL-EQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122

Query: 482 EKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFAL 622
           E     + Y+A Q     +A G             + +  +Y+ F L
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 67.7 bits (158), Expect = 2e-12
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
 Frame = +2

Query: 122 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSM- 298
           +V D G+ + + G+AG   P  I PS  G   +R+     D+  ++  V DE      + 
Sbjct: 13  LVIDPGSCWTRFGYAGEESPMTILPSYYG---VRS-----DVTGRNKYVVDELQIHAPIP 64

Query: 299 -LEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 475
            +EV     NG++++WE   + W+      K+ V+P E  +++TEP  NP   R++++E 
Sbjct: 65  GMEVKNGKSNGIIQDWESTLYTWERGL-KEKLQVNPTEYAMMITEPSWNPQSVRQQIMEA 123

Query: 476 MFEKYEFDSAYVAIQAVLTLYA 541
            FE+    + Y+  QAV   +A
Sbjct: 124 AFEQLHVPAFYLTKQAVCVAFA 145


>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 401

 Score = 49.6 bits (113), Expect = 4e-07
 Identities = 51/213 (23%), Positives = 82/213 (38%), Gaps = 17/213 (7%)
 Frame = +2

Query: 116 KVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLR- 292
           K IV DNG   +K GFAG          +V  P     +K G+     L +G+E +    
Sbjct: 6   KTIVLDNGAYHIKAGFAGG--------KVVEIPNCLTRSKDGN----RLFLGNELANCND 53

Query: 293 -SMLEVSYPMENGVVRNWEDMCHVWDYTF-GPSKMNVDPKETKILLTEPPMNPTKNREKM 466
            + L+     E G + +W     VWD        M     +  +LLT+P           
Sbjct: 54  FTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNT 113

Query: 467 IEVMFEKYEFDSAYVAIQAVLTLYAQGLI--------------XXXXXXXXXXXTHICPV 604
           I+++FE+++FD+      A L  +  G                           THI PV
Sbjct: 114 IQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPV 173

Query: 605 YEEFALPHLTRRLDIXGRDITRYLIKLLLLRGY 703
            +        +R+D+ G+ +T YL +++  R Y
Sbjct: 174 IDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKY 206


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 46.0 bits (104), Expect = 5e-06
 Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
 Frame = +2

Query: 314 PMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETK----ILLTEPPMNPTKNREKMIEVMF 481
           P++ G V +WE +   W + +  S +  DP +T     + L  P      +RE   +  F
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY--SLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFF 170

Query: 482 EKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIXGRD 661
           E+ +     +A + ++ LYA G++           T I P+ +   +   T++L + GR 
Sbjct: 171 EECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRY 230

Query: 662 ITRYLIKLL 688
           +T++L  LL
Sbjct: 231 MTQHLQNLL 239


>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 35.1 bits (77), Expect = 0.010
 Identities = 19/78 (24%), Positives = 37/78 (47%)
 Frame = +2

Query: 458 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 637
           EK+++++F    F  A +  +++ T +  G+            T I  V E   +P+   
Sbjct: 260 EKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRI 319

Query: 638 RLDIXGRDITRYLIKLLL 691
           +++  G DIT   +KLL+
Sbjct: 320 KINYGGDDITLLFMKLLM 337


>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 684

 Score = 29.5 bits (63), Expect = 0.50
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = -1

Query: 637 PGEMRQRELFIHGTNVRHTVTRVHDHSRY----QSLSVQREHSLYRDVSAVELILFKHHL 470
           PG MRQR  F H  N +    R      Y    QS    R++ + R+VS +    F   +
Sbjct: 190 PGFMRQRGRFFHEANEKSDSNRKRKRQAYELDSQSCPWHRQYKVEREVSRI----FHQDI 245

Query: 469 DHFLSILS 446
            HF+  ++
Sbjct: 246 LHFIDYIT 253


>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1316

 Score = 29.1 bits (62), Expect = 0.66
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 243 SPILFSARMIGLPTMEGNINAGKLLPAKPHFTKPVPLSQ 127
           SP  F +R IG+ T+  NI++GK  P+   +    P+S+
Sbjct: 534 SPKPFLSRQIGISTLSSNISSGKGTPSIQDYEIIKPISK 572


>SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 565

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = +2

Query: 362 WDYTFGPS------KMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYEFDSAYVAIQA 523
           W+ T  PS      K   +PK TK+ LT  P    +    M  +    + ++++    +A
Sbjct: 342 WNLTSTPSVFHYLIKAQAEPKTTKVTLTNLPYEFVRFNNSMHSIGDNNFSYNNS----EA 397

Query: 524 VLTLYAQGL 550
           VL ++AQ +
Sbjct: 398 VLQIFAQSV 406


>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 536

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 351 MSSQLRTTPFSIG*LTSSMDRSLDASSPTIKSLTSISPILFSARMIGLPTMEGNINA 181
           +SS   T+P S   +TS +  S   SS +  SLTS S    ++     PT   + +A
Sbjct: 66  LSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHA 122


>SPAC5H10.05c |||FAD binding oxidoreductasde |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 196

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
 Frame = -1

Query: 238 YFVFCAYDRPA----DHGREYKCRKIATSEATFHKAGTVVANDNFPSFVVH 98
           Y + C ++ PA    + G  +  R +  +  TFHKA   +     P+F+V+
Sbjct: 118 YMISCTWNAPAAAFEEVGNFFDGRGVDGTLLTFHKANQFLGMKPLPTFMVN 168


>SPAP8A3.14c |||mitochondrial inner membrane protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 677

 Score = 25.4 bits (53), Expect = 8.2
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +2

Query: 338 NWEDMCHVWDYTFGPSKMNVDPKETKILLTEP-PMNPTKNRE-KMIEV 475
           +W+  C V +Y++  S ++ D   T+  LT P P+ P+ N++   IEV
Sbjct: 335 SWKRWCRVKEYSWNTSVLS-DEALTRNSLTLPVPIKPSINKDISSIEV 381


>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 523

 Score = 25.4 bits (53), Expect = 8.2
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -1

Query: 364 PHVAHVLPITYDPILHRVANFKHGSQFGCFITHHQVLNINISYF 233
           P+ +H+  +  +  LH   +     Q+G    H   L    SYF
Sbjct: 149 PYASHITSLLSNSALHFTTDIVFAGQYGRVFAHKFYLAARSSYF 192


>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 613

 Score = 25.4 bits (53), Expect = 8.2
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -1

Query: 706 SIPSEQKQFDEIPRDIPPGYVQPPGEMRQRELFIHGTNVRHTVTRVHDH 560
           ++       DE+ ++I P    PPG  R+R+ F   ++V      + DH
Sbjct: 97  AVAKASNSLDELAQNIIPA-PSPPGFNRKRKTFDEDSSVEMIRRAISDH 144


>SPAC1687.13c |csn5||COP9/signalosome complex subunit
           Csn5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 299

 Score = 25.4 bits (53), Expect = 8.2
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -1

Query: 652 GYVQPPGEMRQRELFI---HGTNVRHTVTRVHDHSRYQSLSVQREHSLYRDVSAVELILF 482
           GYVQ  G++    L I       V  T TRV+ H   Q  SVQ  H+L + V   E ++ 
Sbjct: 59  GYVQ--GKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQ-YHTLCKSVYRHENVIG 115

Query: 481 KHH 473
            +H
Sbjct: 116 WYH 118


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,093,837
Number of Sequences: 5004
Number of extensions: 66932
Number of successful extensions: 238
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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