Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C22
         (347 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    27   0.073
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   1.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   2.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   2.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   6.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   6.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 26.6 bits (56), Expect = 0.073
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 205 IHVFFFLIPFSXHRRLRTTLVSIYLCLRIVVLSLST 98
           I   F L+P   H RL   +  +YL    VVLSL +
Sbjct: 13  ISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGS 48


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 258 FKFITDVKNIFSSFIKNVYMFFFF 187
           F+F+  V NIF +F+  ++    F
Sbjct: 66  FRFVYAVYNIFGAFVMGLFCILKF 89


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 292 CKKYWSCCNQT 324
           C +YW+C N T
Sbjct: 112 CTRYWTCWNGT 122



 Score = 21.0 bits (42), Expect = 3.6
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +1

Query: 292 CKKYWSCCN 318
           C +YW C N
Sbjct: 42  CDRYWECVN 50


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +1

Query: 292 CKKYWSCCN 318
           C KYW C N
Sbjct: 38  CDKYWKCDN 46



 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 283 PLECKKYWSCCNQT 324
           P +C+KY+ C   T
Sbjct: 175 PDDCRKYYICLEGT 188


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +1

Query: 292 CKKYWSCCN 318
           C KYW C N
Sbjct: 38  CDKYWKCDN 46



 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 283 PLECKKYWSCCNQT 324
           P +C+KY+ C   T
Sbjct: 175 PDDCRKYYICLEGT 188


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 237 KNIFSSFIKNVYMFF 193
           KN+  S I NV M+F
Sbjct: 745 KNLIFSLIANVAMYF 759


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 83  FVQFLAILNEDERRHRVDVVLAGD 12
           F+Q LAI+ E E   R  V L  D
Sbjct: 328 FIQLLAIVPEKEESSRQAVNLICD 351


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 83  FVQFLAILNEDERRHRVDVVLAGD 12
           F+Q LAI+ E E   R  V L  D
Sbjct: 328 FIQLLAIVPEKEESSRQAVNLICD 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,078
Number of Sequences: 336
Number of extensions: 1200
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)