Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C22
(347 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 40 4e-04
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349... 38 0.003
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 37 0.004
12_01_1027 + 10529545-10529777,10530269-10530668 37 0.005
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 37 0.005
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 36 0.007
04_04_0598 - 26514226-26514545,26516080-26516302 36 0.007
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 35 0.015
12_01_1031 - 10605581-10606088,10606360-10606420,10606448-106064... 35 0.020
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 34 0.035
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 32 0.11
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 31 0.19
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 29 0.76
04_04_1248 - 32051679-32052356,32053617-32053778,32054147-320542... 29 0.76
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 29 0.76
09_06_0119 - 20969450-20969643,20969767-20970088,20970147-209703... 28 2.3
06_03_1048 + 27146475-27146652,27146739-27146804,27146880-271469... 27 3.1
04_04_0782 + 28038292-28038413,28038577-28038778,28039221-280392... 27 3.1
09_02_0186 - 5520641-5521144 26 9.3
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 26 9.3
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 40.3 bits (90), Expect = 4e-04
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
+++A +YN+ +MPTF+F+K+G + D+ GA D
Sbjct: 71 KEVAEKYNVEAMPTFLFIKDGAEADKVVGARKD 103
>01_01_0474 -
3488739-3488876,3488996-3489118,3489878-3489991,
3490416-3490452,3490584-3490675,3490878-3490956,
3491640-3491734,3491858-3491991,3492560-3492833,
3493743-3494015,3494976-3495512
Length = 631
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
D +S ++I + PTF F+KNG+++D+ GAN
Sbjct: 587 DFSSSWDIRATPTFFFLKNGEQVDKLVGAN 616
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 37.1 bits (82), Expect = 0.004
Identities = 13/29 (44%), Positives = 24/29 (82%)
Frame = +3
Query: 12 IASEYNINSMPTFVFVKNGKKLDEFSGAN 98
+A +N++S+P+F FV+NGK++D+ GA+
Sbjct: 704 VAYRWNVSSVPSFFFVRNGKEIDKVVGAD 732
>12_01_1027 + 10529545-10529777,10530269-10530668
Length = 210
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 6 EDIASEYNINSM-PTFVFVKNGKKLDEFSGA 95
E+IA Y++N + PTF FVK G+K+D GA
Sbjct: 47 EEIADSYDVNGVVPTFTFVKAGQKIDMIQGA 77
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 36.7 bits (81), Expect = 0.005
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
D +S ++I + PTF F+KN K++D+ GAN
Sbjct: 88 DFSSSWDIRATPTFFFIKNEKQVDKLVGAN 117
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 36.3 bits (80), Expect = 0.007
Identities = 10/31 (32%), Positives = 24/31 (77%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
+++ ++Y++ + PTF+F+KN +++D+ G N
Sbjct: 700 QELVTQYDVRATPTFIFMKNNEEIDKLVGGN 730
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 36.3 bits (80), Expect = 0.007
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGA 95
DIAS+Y + S+PT + KNG+K D GA
Sbjct: 136 DIASQYGVRSIPTMMIFKNGEKKDAVIGA 164
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 35.1 bits (77), Expect = 0.015
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
+I+ Y + ++P FVF+K GK +D GAN
Sbjct: 64 EISEAYGVTAVPYFVFLKEGKTVDTLEGAN 93
>12_01_1031 - 10605581-10606088,10606360-10606420,10606448-10606491,
10606664-10608382,10609848-10610791
Length = 1091
Score = 34.7 bits (76), Expect = 0.020
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 6 EDIASEYNINSM-PTFVFVKNGKKLDEFSGAN 98
E + Y+I + PTF FVK+G+K+D+ GAN
Sbjct: 1041 ESVTDWYDIEGIVPTFFFVKDGEKIDKIPGAN 1072
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 33.9 bits (74), Expect = 0.035
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGA 95
DIA+++ I S+PT + KNG+K D GA
Sbjct: 169 DIATQFGIRSIPTMMIFKNGEKKDAVIGA 197
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 32.3 bits (70), Expect = 0.11
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 12 IASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
IA ++++ +MPTF+F+K G D GA D
Sbjct: 79 IAEQFSVEAMPTFLFMKEGDVKDRVVGAMKD 109
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 31.5 bits (68), Expect = 0.19
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
+ +A E I +PTF +K+GK + E +GA +D
Sbjct: 143 KSLAKELGIKVVPTFKILKDGKVVKEVTGAKLD 175
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 29.5 bits (63), Expect = 0.76
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
++A + + +MPTFV + G+++ GA+ D
Sbjct: 87 EVARTWRVEAMPTFVLARGGEEVGRIVGADKD 118
>04_04_1248 -
32051679-32052356,32053617-32053778,32054147-32054269,
32054686-32054793
Length = 356
Score = 29.5 bits (63), Expect = 0.76
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
+ ++S+ + +MPTF +K+ + +++ GAN D
Sbjct: 77 QSVSSKLGVKAMPTFFLIKDKEVVNKIVGANPD 109
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 29.5 bits (63), Expect = 0.76
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKK 74
++A ++ + +MPTFV +K GK+
Sbjct: 88 EVARQWKVEAMPTFVLIKGGKE 109
>09_06_0119 -
20969450-20969643,20969767-20970088,20970147-20970380,
20970659-20970789,20970874-20971147
Length = 384
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 273 LKINIFKFITDVKNIFSSFIKNVYMFFFF 187
L+ +I ++ + N+ S F+KN++MF F
Sbjct: 193 LQFDISSYVDFLANLASDFVKNLFMFSLF 221
>06_03_1048 +
27146475-27146652,27146739-27146804,27146880-27146975,
27147073-27147152,27148165-27148209,27148326-27148420,
27148623-27148632
Length = 189
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 18 SEYNINSMPTFVFVKNGKKLDEFSGAN 98
S+ I S+PTF F G+K E GAN
Sbjct: 148 SDLKIFSVPTFHFYYQGRKTGEVVGAN 174
>04_04_0782 +
28038292-28038413,28038577-28038778,28039221-28039246,
28039750-28039969
Length = 189
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 27 NINSMPTFVFVKNGKKLDEFSG 92
NI PTF F ++G+K+DE G
Sbjct: 154 NIRYTPTFHFYRDGEKVDEMLG 175
>09_02_0186 - 5520641-5521144
Length = 167
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 181 ELKKKKHVYVFNK*RKNVFNVCNEFEDINFXCLXPLECKK 300
EL +K N RK +F + N +N CL L C++
Sbjct: 87 ELIRKFDAEFVNIDRKKLFGLINAANFLNMPCLLELTCQR 126
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 12 IASEYNINSMPTFVFVKNGKKLDEFSG 92
+A+ Y+I +PT + K+G+K +G
Sbjct: 79 VATSYSIERIPTVLLFKDGEKTHSITG 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,694,321
Number of Sequences: 37544
Number of extensions: 97217
Number of successful extensions: 221
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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