Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_C22
         (347 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    48   1e-07
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   3.2  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   3.2  
EF519476-1|ABP73561.1|  165|Anopheles gambiae CTLMA2 protein.          21   9.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   9.9  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    21   9.9  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 48.0 bits (109), Expect = 1e-07
 Identities = 18/34 (52%), Positives = 28/34 (82%)
 Frame = +3

Query: 3   CEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
           CE++A++YNI SMPTF+F+K  + + +FSGAN +
Sbjct: 63  CEELAAQYNIASMPTFLFIKRKEVVGQFSGANAE 96


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 148 LVSIYLCLRIVVLSLSTLAPE 86
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 148 LVSIYLCLRIVVLSLSTLAPE 86
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>EF519476-1|ABP73561.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 80  VQFLAILNEDERRHRVDVVLAGD 12
           ++   +LNEDE R   +V+  G+
Sbjct: 59  MELAEVLNEDEARAMGEVIAEGE 81


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 264  NIFKFITDVKNIFSSFIKNVYMFFF 190
            NIFK I +  N+F S + +   F++
Sbjct: 3227 NIFKDIEEDFNVFLSTVNHSRTFYY 3251


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 336 YLXNCLITTGPIFFAF 289
           +L NC I  G +FFA+
Sbjct: 72  FLFNCNIYGGSMFFAY 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,213
Number of Sequences: 2352
Number of extensions: 5030
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)