Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C22
(347 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 46 6e-06
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 41 2e-04
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 41 2e-04
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 41 2e-04
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 38 0.001
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 38 0.001
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 38 0.001
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 38 0.001
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 36 0.008
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 36 0.008
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 36 0.008
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 33 0.042
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 32 0.13
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 29 0.91
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 29 0.91
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 27 2.8
AF043704-4|AAK21479.1| 109|Caenorhabditis elegans Hypothetical ... 27 3.7
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 27 4.9
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 27 4.9
U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical pr... 26 6.4
AC006617-11|AAF39766.2| 356|Caenorhabditis elegans Serpentine r... 26 6.4
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 46.4 bits (105), Expect = 6e-06
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3
Query: 3 CEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
C+ + EY INSMPTF+ + +G K D+FSGAN
Sbjct: 63 CDGVGEEYEINSMPTFLLIVDGIKKDQFSGAN 94
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
DI YNI++MPTF+F+KN +++D GAN
Sbjct: 66 DIVQRYNISAMPTFIFLKNRQQVDMVRGAN 95
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
DI YNI++MPTF+F+KN +++D GAN
Sbjct: 66 DIVQRYNISAMPTFIFLKNRQQVDMVRGAN 95
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase
protein.
Length = 542
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
DI YNI++MPTF+F+KN +++D GAN
Sbjct: 2 DIVQRYNISAMPTFIFLKNRQQVDMVRGAN 31
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
ED+ S+Y++ MPTF+F KNG ++ G D
Sbjct: 70 EDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
ED+ S+Y++ MPTF+F KNG ++ G D
Sbjct: 69 EDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
ED+ S+Y++ MPTF+F KNG ++ G D
Sbjct: 69 EDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 104
ED+ S+Y++ MPTF+F KNG ++ G D
Sbjct: 70 EDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 35.9 bits (79), Expect = 0.008
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 3 CEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 63 CEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 35.9 bits (79), Expect = 0.008
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 3 CEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 63 CEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 35.9 bits (79), Expect = 0.008
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 3 CEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 63 CEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 33.5 bits (73), Expect = 0.042
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 3 CEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 98
C A+ Y +N+MPTF+ NG+K GA+
Sbjct: 63 CRGTAATYGVNAMPTFIAFVNGQKKATIQGAD 94
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGKKLDEFSG 92
++A +Y I+++PT KNG+K+ FSG
Sbjct: 75 ELAMDYGISAVPTVFAFKNGEKISGFSG 102
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 12 IASEYNINSMPTFVFVKNGKKLDEFSG 92
I+ + I + PT VF NGK++D G
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDG 91
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 12 IASEYNINSMPTFVFVKNGKKLDEFSG 92
I+ + I + PT VF NGK++D G
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDG 91
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 27.5 bits (58), Expect = 2.8
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = +3
Query: 6 EDIASEYNINSMPTFVFVKNGKKLD 80
+D+ ++Y ++ PT ++NG++ D
Sbjct: 211 KDLGTKYGVSGYPTMKIIRNGRRFD 235
>AF043704-4|AAK21479.1| 109|Caenorhabditis elegans Hypothetical
protein W01B11.6a protein.
Length = 109
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 24 YNINSMPTFVFVKNGKKLDEFSGANVD 104
+ +N++PTFV + NG+++ GA +
Sbjct: 72 FAVNAVPTFVVMNNGEEVTRHVGAEAE 98
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGK 71
DIA++Y++N PT +NG+
Sbjct: 83 DIATKYHVNKYPTLKLFRNGE 103
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 9 DIASEYNINSMPTFVFVKNGK 71
DIA++Y++N PT +NG+
Sbjct: 83 DIATKYHVNKYPTLKLFRNGE 103
>U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical
protein C01G8.6 protein.
Length = 344
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 235 FNVCNEFEDINFXCLXPLEC 294
F+ ++FED+N C PL C
Sbjct: 74 FSSISDFEDLNLRCSTPLVC 93
>AC006617-11|AAF39766.2| 356|Caenorhabditis elegans Serpentine
receptor, class z protein56 protein.
Length = 356
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 158 AYNFSLYLLVFKDSCFEFVDVSAREFVQFL 69
AYNF+ +L++ CF V+V F F+
Sbjct: 16 AYNFTSFLMLLPIPCFLIVNVLITPFYMFV 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,255,053
Number of Sequences: 27780
Number of extensions: 104501
Number of successful extensions: 307
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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