BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_C21
(893 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 2e-19
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 4e-19
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 5e-15
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 46 3e-05
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 42 5e-04
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.077
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 33 0.41
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 0.95
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 0.95
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.95
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22) 31 1.3
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 2.2
SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1) 29 5.1
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 29 6.7
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 29 6.7
SB_44782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011) 28 8.9
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 93.9 bits (223), Expect = 2e-19
Identities = 58/161 (36%), Positives = 83/161 (51%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 500
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG-- 207
Query: 501 TGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 680
G + L + P W G ++ AL LE V ++ ++ K E D + D+L
Sbjct: 208 -GRIV-LQDIKRPERDDWGCGQDVIQAALDLEKHVNQALHDLHKVAE-KHGDSQMQDWLE 264
Query: 681 GEFLDEQYKGQRDLAGKASTLKKMMDKHAALGXFIFDKKLL 803
+L EQ + ++LAG + LK++ LG F FDK L
Sbjct: 265 SHYLTEQVEAIKELAGHMTNLKRV---GPGLGEFQFDKHTL 302
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 93.1 bits (221), Expect = 3e-19
Identities = 59/161 (36%), Positives = 83/161 (51%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 500
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG-- 192
Query: 501 TGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 680
G + L + P W G A++ AL LE V ++ ++ K E D + D+L
Sbjct: 193 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQALLDLHKVAE-KHGDSQMQDWLE 249
Query: 681 GEFLDEQYKGQRDLAGKASTLKKMMDKHAALGXFIFDKKLL 803
+L EQ + ++LAG + LK++ LG F FDK L
Sbjct: 250 SHYLTEQVEAIKELAGHLTNLKRV---GPGLGEFQFDKLTL 287
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 92.7 bits (220), Expect = 4e-19
Identities = 57/168 (33%), Positives = 87/168 (51%)
Frame = +3
Query: 303 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 482
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 483 LMRGKLTGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYH 662
RG G + L + P W G +++ AL LE V ++ ++ K E D
Sbjct: 257 NERG---GRIV-LQDIKKPEKDEWGCGMDSIQVALDLEKHVNQALLDLHKIAE-KHGDAQ 311
Query: 663 LVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGXFIFDKKLLG 806
+ D++ G FL EQ + ++LAG + LK++ LG + +D + +G
Sbjct: 312 MTDFIEGNFLTEQVEAIKELAGHLTNLKRV---GPGLGEYQYDHETIG 356
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/143 (32%), Positives = 74/143 (51%)
Frame = +3
Query: 378 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLITYRAPANTSWE 557
A+F D ++ PGFA F AA EE HA +++L RG G V L P W
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG---GRV-KLHHIMKPCRDHWG 57
Query: 558 SGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKAS 737
+G A+ AL LE ++ +++ ++ + +++ D + D+L FL EQ + LA S
Sbjct: 58 NGLMAMRDALYLEKEINHALLDLHQVADTN-RDPQVQDFLESNFLGEQVDSIKTLANYVS 116
Query: 738 TLKKMMDKHAALGXFIFDKKLLG 806
TL+++ LG + FDK+ LG
Sbjct: 117 TLQRL---GGGLGEYQFDKETLG 136
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 79.0 bits (186), Expect = 5e-15
Identities = 57/168 (33%), Positives = 79/168 (47%)
Frame = +3
Query: 303 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 482
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK----- 64
Query: 483 LMRGKLTGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYH 662
P W SG A++ AL LE V ++ E+ KT E + D
Sbjct: 65 -----------------KPERDEWGSGLEAMQTALDLEKHVNQALIELEKTAEKN-GDAQ 106
Query: 663 LVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGXFIFDKKLLG 806
+ D++ FL EQ + R+L+G + LKK+ LG + FD + LG
Sbjct: 107 MSDFIEDHFLTEQVESIRELSGYIAVLKKV---GPGLGVYQFDHETLG 151
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 65.3 bits (152), Expect = 6e-11
Identities = 39/96 (40%), Positives = 51/96 (53%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 500
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG-- 75
Query: 501 TGSVTNLITYRAPANTSWESGASALEHALKLESDVT 608
G + L + P W G A++ AL LE+ T
Sbjct: 76 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLENTST 109
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 49.2 bits (112), Expect = 4e-06
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHA---------TK-----LIDYLLMR--GKLT--G 506
+F D +N PGF K F A+ EE EHA TK I +LL + LT G
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHAQMVKTAALQTKCYRKLTIVWLLFQFMAYLTKRG 91
Query: 507 SVTNLITYRAPANTSWESGASALEHALKLESDVTNSIR------------EVIKTCES-- 644
L P W +G A+E AL LE ++ +S++ +++ C
Sbjct: 92 GRVKLNDIPTPCRDQWGNGLMAMEDALALEKEILSSLQALHRKAQEENDAQIVTMCAQIP 151
Query: 645 SFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGXFIFDKKLL 803
+ + D++ FL+EQ + L+ STL+++ + LG + FDK+ L
Sbjct: 152 RYPSLQMQDFIEETFLNEQMDSIKQLSNYVSTLRRLGGE--GLGEYQFDKETL 202
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHA 461
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 435 AATEEREHATKLIDYLLMRGKLTGSVTNLITYRAPANTSWESGASALEHALKLESDVTNS 614
A+ EEREHA KL + L RG G + L + P W G A++ AL LE V +
Sbjct: 3 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQA 58
Query: 615 IREVIKTCE 641
+ ++ K E
Sbjct: 59 LHDLHKVAE 67
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 35.1 bits (77), Expect = 0.077
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 524
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 555 ESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 680
ES A+ LEH L+ E++ N +R+ T SS N+Y V+YL+
Sbjct: 1823 ESKAADLEHRLETEANDKNKLRQENITLASSLNEYK-VNYLT 1863
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22)
Length = 233
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/77 (31%), Positives = 32/77 (41%)
Frame = -2
Query: 634 VLMTSRMLLVTSLSSLRACSRADAPLSHDVLAGALYVMRLVTEXXXXXXXXXXXXXXVAC 455
VL TSR +L TS S L A SR+ S VLA + Y++ +
Sbjct: 144 VLATSRSVLATSRSVL-ATSRSVLATSRSVLATSRYILATSRSVLATGRSSFATSRYILA 202
Query: 454 SRSSVAASKNSFAKPGR 404
+ SV A+ S GR
Sbjct: 203 TSRSVLATSRSVLATGR 219
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 634 VLMTSRMLLVTSLSSLRACSRADAPLSHDVLAGALYVMRLV-TEXXXXXXXXXXXXXXVA 458
VL TSR +L TS S L A SR+ S VLA + Y++ + +A
Sbjct: 81 VLATSRSVLATSRSVL-ATSRSVLATSRSVLATSRYILATSRSVLATGRSSFATSRYILA 139
Query: 457 CSRSSVAASKNSFA 416
SRS +A S++ A
Sbjct: 140 TSRSVLATSRSVLA 153
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 713 ARPRRQGLDPQEDDGQARRPRXVHLR 790
ARPR+ PQ+ D QA RPR L+
Sbjct: 40 ARPRQASRKPQDQDKQAARPRQASLK 65
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2
Query: 269 RHHQG*VAHHGADLLQHDEETDPGGSG 349
RHHQ AHHG L+HD E D GSG
Sbjct: 811 RHHQH-GAHHG---LKHDTENDASGSG 833
>SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.1 bits (62), Expect = 5.1
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Frame = +2
Query: 563 RISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRT---------VQGPA 715
R PR RP + ++ HQ+ R + +R PP RG PR++ QG
Sbjct: 53 RRRPRPRPNSEGKEGEEADHEHQEERPRGRRPPPWWRRRRGPPRKSDSAEHSGADSQGEG 112
Query: 716 RPRRQGLDPQEDDGQARRPRXVHLRQ-ETPRIE 811
+++G +E + + RRPR R+ PR E
Sbjct: 113 N-KQEGSAEEEREQRPRRPRRPRFRKSRQPRSE 144
>SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1)
Length = 355
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 725 RQGLDPQEDDGQARRPRXVHLRQETPR 805
R+ PQ+ D QA RPR RQ PR
Sbjct: 41 RKTSKPQDQDKQAARPRQARTRQARPR 67
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = +2
Query: 494 QADRLRNQPHHVQGPRQHVVGERRISPRA--RPQAGE*RHQQHPGGHQDLREQLQRLPPG 667
+ +L++Q + PRQ + P+ +PQ + Q P + + G
Sbjct: 719 KTSKLQDQDNQAARPRQASRKTKTSKPQDQDKPQDKQVARQARPRQASRKTKTSKPQDHG 778
Query: 668 RLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRXVHLRQETPRIE 811
+ R PR+ + Q D QE D QA RPR + + +++
Sbjct: 779 KQATR--PRQASHKTRTKKPQDQDKQEQDKQAARPRHASCKTKASKLQ 824
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = +2
Query: 569 SPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQGPARPRRQG----- 733
S + + QAG P H+ Q P + + P+ PARPR+
Sbjct: 251 SHKTKGQAGRKIKISKPQNHKQAPRPRQASPKTK--GQASPKTKSTKPARPRQASPKAKT 308
Query: 734 LDPQEDDGQARRPRXVHLRQETPR 805
PQ+ D Q RPR L+ +T +
Sbjct: 309 SKPQDQDKQVARPRQSSLKTKTSK 332
>SB_44782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/99 (24%), Positives = 37/99 (37%)
Frame = +2
Query: 509 RNQPHHVQGPRQHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGI 688
+ Q PRQ + P+ + + R P QD +Q R R R
Sbjct: 124 QGQDKQAARPRQASRKAKPSKPQGQAKQAARRKTSKPQDKQDKDKQAARKRQAR--TRQA 181
Query: 689 PRRTVQGPARPRRQGLDPQEDDGQARRPRXVHLRQETPR 805
R+ +P + PQ+ D QA RPR + +T +
Sbjct: 182 SRKKKTSKVKPSK----PQDQDKQAARPRQASRKTKTSK 216
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 317 VVASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPH 189
V+A LL G+P+ P G D L + G+ E KE +PH
Sbjct: 252 VLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIKEMNPH 293
>SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011)
Length = 318
Score = 28.3 bits (60), Expect = 8.9
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 603 VTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 698
+ ++ EV E NDY ++DY+ +F ++
Sbjct: 187 INEALEEVSSDAEKQANDYEIIDYMMHKFKEQ 218
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,879,263
Number of Sequences: 59808
Number of extensions: 480094
Number of successful extensions: 1349
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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